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result(s) for
"MICROCOSMS"
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Species Richness and the Temporal Stability of Biomass Production: A New Analysis of Recent Biodiversity Experiments
by
Cardinale, Bradley J.
,
Fox, Jeremy W.
,
Reich, Peter B.
in
Algae
,
Animal populations
,
aquatic microcosms
2014
The relationship between biological diversity and ecological stability has fascinated ecologists for decades. Determining the generality of this relationship, and discovering the mechanisms that underlie it, are vitally important for ecosystem management. Here, we investigate how species richness affects the temporal stability of biomass production by reanalyzing 27 recent biodiversity experiments conducted with primary producers. We find that, in grasslands, increasing species richness stabilizes whole-community biomass but destabilizes the dynamics of constituent populations. Community biomass is stabilized because species richness impacts mean biomass more strongly than its variance. In algal communities, species richness has a minimal effect on community stability because richness affects the mean and variance of biomass nearly equally. Using a new measure of synchrony among species, we find that for both grasslands and algae, temporal correlations in species biomass are lower when species are grown together in polyculture than when grown alone in monoculture. These results suggest that interspecific interactions tend to stabilize community biomass in diverse communities. Contrary to prevailing theory, we found no evidence that species’ responses to environmental variation in monoculture predicted the strength of diversity’s stabilizing effect. Together, these results deepen our understanding of when and why increasing species richness stabilizes community biomass.
Journal Article
Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning
by
van der Heijden, Marcel G. A.
,
Wagg, Cameron
,
Banerjee, Samiran
in
631/158/855
,
704/158/2445
,
Bacteria
2019
The soil microbiome is highly diverse and comprises up to one quarter of Earth’s diversity. Yet, how such a diverse and functionally complex microbiome influences ecosystem functioning remains unclear. Here we manipulated the soil microbiome in experimental grassland ecosystems and observed that microbiome diversity and microbial network complexity positively influenced multiple ecosystem functions related to nutrient cycling (e.g. multifunctionality). Grassland microcosms with poorly developed microbial networks and reduced microbial richness had the lowest multifunctionality due to fewer taxa present that support the same function (redundancy) and lower diversity of taxa that support different functions (reduced functional uniqueness). Moreover, different microbial taxa explained different ecosystem functions pointing to the significance of functional diversity in microbial communities. These findings indicate the importance of microbial interactions within and among fungal and bacterial communities for enhancing ecosystem performance and demonstrate that the extinction of complex ecological associations belowground can impair ecosystem functioning.
There is ongoing interest in linking soil microbial diversity to ecosystem function. Here the authors manipulate the diversity and composition of microbial communities and show that complex microbial networks contribute more to ecosystem multifunctionality than simpler or low-diversity networks.
Journal Article
Arbuscular mycorrhizal fungi enhance mineralisation of organic phosphorus by carrying bacteria along their extraradical hyphae
by
Zhou, Jiachao
,
Jiang, Feiyan
,
Zhang, Lin
in
Arbuscular mycorrhizas
,
Bacteria
,
bacterial migration
2021
• Arbuscular mycorrhizal (AM) fungi gain access to nutrient patches outside the rhizosphere by producing an extensive network of fine hyphae. Here, we focused on establishing the mechanism by which AM fungal hyphae reach discrete organic patches with a cohort of functional bacteria transported in a biofilm on their surface.
• We investigated the mechanisms and impact of the translocation of phosphate solubilising bacteria (PSB) along AM fungal hyphae in bespoke microcosms. An in vitro culture experiment was also conducted to determine the direct impact of hyphal exudates of AM fungi upon the growth of PSB.
• The extraradical hyphae of AM fungi can transport PSB to organic phosphorus (P) patches and enhance organic P mineralisation both under in vitro culture and soil conditions. Bacteria move in a thick water film formed around fungal hyphae. However, the bacteria cannot be transferred to the organic P patch without an energy source in the form of hyphal exudates.
• Our results could be harnessed to better manage plant–microbe interactions and improve the ability of biological inocula involving AM fungi and bacteria to enhance the sustainability of agricultural crops in P limited conditions.
Journal Article
Microbial formation of stable soil carbon is more efficient from belowground than aboveground input
2019
The relative contributions of aboveground versus belowground plant carbon inputs to the stable soil organic carbon pool are the subject of much debate—with direct implications for how the carbon cycle is modelled and managed. The belowground rhizosphere pathway (that is, carbon exiting the living root) is theorized to form stable soil carbon more efficiently than the aboveground pathway. However, while several mechanisms have been invoked to explain this efficiency, few have been empirically tested or quantified. Here, we use soil microcosms with standardized carbon inputs to investigate three posited mechanisms that differentiate aboveground from belowground input pathways of dissolved organic carbon—through the microbial biomass—to the mineral-stabilized soil organic carbon pool: (1) the physical distance travelled, (2) the microbial abundance in the region in which a carbon compound enters (that is, rhizosphere versus bulk soil) and (3) the frequency and volume of carbon delivery (that is, infrequent ‘pulse’ versus frequent ‘drip’). We demonstrate that through the microbial formation pathway, belowground inputs form mineral-stabilized soil carbon more efficiently than aboveground inputs, partly due to the greater efficiency of formation by the rhizosphere microbial community relative to the bulk soil community. However, we show that because the bulk soil has greater capacity to form mineral-stabilized soil carbon due to its greater overall volume, the relative contributions of aboveground versus belowground carbon inputs depend strongly on the ratio of rhizosphere to bulk soil.
Journal Article
Multiple anthropogenic pressures eliminate the effects of soil microbial diversity on ecosystem functions in experimental microcosms
2022
Biodiversity is crucial for the provision of ecosystem functions. However, ecosystems are now exposed to a rapidly growing number of anthropogenic pressures, and it remains unknown whether biodiversity can still promote ecosystem functions under multifaceted pressures. Here we investigated the effects of soil microbial diversity on soil functions and properties when faced with an increasing number of simultaneous global change factors in experimental microcosms. Higher soil microbial diversity had a positive effect on soil functions and properties when no or few (i.e., 1–4) global change factors were applied, but this positive effect was eliminated by the co-occurrence of numerous global change factors. This was attributable to the reduction of soil fungal abundance and the relative abundance of an ecological cluster of coexisting soil bacterial and fungal taxa. Our study indicates that reducing the number of anthropogenic pressures should be a goal in ecosystem management, in addition to biodiversity conservation.
It is unclear whether the positive effects of biodiversity on ecosystem functioning are maintained under multifaceted anthropogenic disturbance. In this experiment, the authors show that multiple simultaneous stressors can negate the positive effect of microbial diversity on soil functions.
Journal Article
Microbial diversity drives carbon use efficiency in a model soil
2020
Empirical evidence for the response of soil carbon cycling to the combined effects of warming, drought and diversity loss is scarce. Microbial carbon use efficiency (CUE) plays a central role in regulating the flow of carbon through soil, yet how biotic and abiotic factors interact to drive it remains unclear. Here, we combine distinct community inocula (a biotic factor) with different temperature and moisture conditions (abiotic factors) to manipulate microbial diversity and community structure within a model soil. While community composition and diversity are the strongest predictors of CUE, abiotic factors modulated the relationship between diversity and CUE, with CUE being positively correlated with bacterial diversity only under high moisture. Altogether these results indicate that the diversity × ecosystem-function relationship can be impaired under non-favorable conditions in soils, and that to understand changes in soil C cycling we need to account for the multiple facets of global changes.
Microbial carbon use efficiency has an important role in soil C cycling. Here the authors test the interactive effects of temperature and moisture and manipulate microbial community composition in soil microcosms, showing a positive relationship between microbial diversity and CUE that is contingent on abiotic conditions.
Journal Article
Constructed wetland microcosms as sustainable technology for domestic wastewater treatment: an overview
2019
Constructed wetland microcosms (CWMs) are artificially designed ecosystem which utilizes both complex and ordinary interactions between supporting media, macrophytes, and microorganisms to treat almost all types of wastewater. CWMs are considered as green and sustainable techniques which require lower energy input, less operational and maintenance cost and provide critical ecological benefits such as wildlife habitat, aquaculture, groundwater recharge, flood control, recreational uses, and add aesthetic value. They are good alternatives to conventional treatment systems particularly for smaller communities as well as distant and decentralized locations. The pH, dissolved oxygen (DO), and temperature are the key controlling factors while several other parameters such as hydraulic loading rates (HLR), hydraulic retention time (HRT), diversity of macrophytes, supporting media, and water depth are critical to achieving better performance. From the literature survey, it is evaluated that the removal performance of CWMs can be improved significantly through recirculation of effluent and artificial aeration (intermittent). This review paper presents an assessment of CWMs as a sustainable option for treatment of wastewater nutrients, organics, and heavy metals from domestic wastewater. Initially, a concise note on the CWMs and their components are presented, followed by a description of treatment mechanisms, major constituents involved in the treatment process, and overall efficiency. Finally, the effects of ecological factors and challenges for their long-term operations are highlighted.
Journal Article
The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions
2018
High and low rates of ammonium supply are believed to favour ammonia-oxidising bacteria (AOB) and archaea (AOA), respectively. Although their contrasting affinities for ammonium are suggested to account for these differences, the influence of ammonia concentration on AOA and AOB has not been tested under environmental conditions. In addition, while both AOB and AOA contribute to nitrous oxide (N
2
O) emissions from soil, N
2
O yields (N
2
O–N produced per NO
2
−
–N generated from ammonia oxidation) of AOA are lower, suggesting lower emissions when AOA dominate ammonia oxidation. This study tested the hypothesis that ammonium supplied continuously at low rates is preferentially oxidised by AOA, with lower N
2
O yield than expected for AOB-dominated processes. Soil microcosms were supplied with water, urea or a slow release, urea-based fertiliser and 1-octyne (inhibiting only AOB) was applied to distinguish AOA and AOB activity and associated N
2
O production. Low ammonium supply, from mineralisation of organic matter, or of the fertiliser, led to growth, ammonia oxidation and N
2
O production by AOA only, with low N
2
O yield. High ammonium supply, from free urea within the fertiliser or after urea addition, led to growth of both groups, but AOB-dominated ammonia oxidation was associated with twofold greater N
2
O yield than that dominated by AOA. This study therefore demonstrates growth of both AOA and AOB at high ammonium concentration, confirms AOA dominance during low ammonium supply and suggests that slow release or organic fertilisers potentially mitigate N
2
O emissions through differences in niche specialisation and N
2
O production mechanisms in AOA and AOB.
Journal Article
Bacterial growth at -15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1
2013
NRC publication: Yes
Journal Article