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As the COVID-19 crisis endures and the virus continues to spread globally, the need for collecting epidemiological data and patient information also grows exponentially. The race against the clock to find a cure and a vaccine to the disease means researchers require storage of increasingly large and diverse types of information; for doctors following patients, recording symptoms and reactions to treatments, the need for storage flexibility is only surpassed by the necessity of storage security. The volume, variety, and variability of COVID-19 patient data requires storage in NoSQL database management systems (DBMSs). But with a multitude of existing NoSQL DBMSs, there is no straightforward way for institutions to select the most appropriate. And more importantly, they suffer from security flaws that would render them inappropriate for the storage of confidential patient data. This paper develops an innovative solution to remedy the aforementioned shortcomings. COVID-19 patients, as well as medical professionals, could be subjected to privacy-related risks, from abuse of their data to community bullying regarding their medical condition. Thus, in addition to being appropriately stored and analyzed, their data must imperatively be highly protected against misuse. This paper begins by explaining the five most popular categories of NoSQL databases. It also introduces the most popular NoSQL DBMS types related to each one of them. Moreover, this paper presents a comparative study of the different types of NoSQL DBMS, according to their strengths and weaknesses. This paper then introduces an algorithm that would assist hospitals, and medical and scientific authorities to choose the most appropriate type for storing patients' information. This paper subsequently presents a set of functions, based on web services, offering a set of endpoints that include authentication, authorization, auditing, and encryption of information. These functions are powerful and effective, making them appropriate to store all the sensitive data related to patients. This paper presents an algorithm to select the most convenient NoSQL DBMS for COVID-19 patients, medical staff, and organizations data. In addition, the paper proposes innovative security solutions that eliminate the barriers to utilizing NoSQL DBMSs to store patients' data. The proposed solutions resolve several security problems including authentication, authorization, auditing, and encryption. After implementing these security solutions, the use of NoSQL DBMSs will become a much more appropriate, safer, and affordable solution to storing and analyzing patients' data, which would contribute greatly to the medical and research effort against COVID-19. This solution can be implemented for all types of NoSQL DBMSs; implementing it would result in highly securing patients' data, and protecting them from any downsides related to data leakage.

Recent advancements in data management highlight the increasing focus on large-scale integration and analytics, with the management of duplicate information becoming a more resource-intensive and costly task. Existing SQL and NoSQL systems inadequately address the semantic constraints of set-based data, either by compromising relational fidelity or through inefficient deduplication mechanisms. This paper presents a set-oriented centralized NoSQL database management system (DBMS) that enforces uniqueness by construction, thereby reducing downstream deduplication and enhancing result determinism. The system utilizes in-memory execution with binary serialized persistence, achieving O(1) time complexity for exact-match CRUD operations while maintaining ACID-compliant transactional semantics through explicit commit operations. A comparative performance evaluation against Redis and MongoDB highlights the trade-offs between consistency guarantees and latency. The results reveal that enforced set uniqueness completely eliminates duplicates, incurring only moderate latency trade-offs compared to in-memory performance measures. The model can be extended for fuzzy queries and imprecise data by retrieving the membership function information. This work demonstrates that the set-oriented DBMS design represents a distinct architectural paradigm that addresses data integrity constraints inadequately handled by contemporary database systems.

A huge volume of data is analyzed by organizations to understand their clients and improve their services. In many cases, these data are stored separately in different database systems and need to be integrated before being used in analysis tools or prediction applications. One of the main tasks of data integration process is the definition of the global schema. Defining a global schema in the context of NoSQL systems is a demanding task since it necessitates dealing with a variety of issues, including the lack of local schemas, data model heterogeneity, and semantic heterogeneity. To address these challenges, this work aims to automatically define the global schema of a set of databases stored in heterogeneous NoSQL systems. The main contributions of this work are presented in three phases: (1) Schema extraction where we define the local schemas using a unified representation. (2) Schema matching in which we propose a hybrid approach to find matching attributes between the local schemas. (3) Schema integration where we define the global schema using the schema matching results. A Covid-19 use case as well as other benchmarks are presented in this paper to evaluate the results of the proposed approach and illustrate its effectiveness.

Within Électricité de France (EDF) hydroelectric power stations, IGCBoxes are industrial mini PCs dedicated to industrial process data archiving. These equipments expose distinctive features, mainly on their storage system based exclusively on flash memory due to environmental constraints. This type of memory had notable consequences on data acquisition performance, with a substantial drop compared with hard disk drives. In this setting, we have designed Chronos, an open-source NoSQL system for sensor data management on flash memories. Chronos includes an efficient quasi-sequential write pattern along with an index management technique adapted for process data management. As a result, Chronos supports a higher velocity for inserted data, with acquisition rates improved by a factor of 20–54 over different solutions, therefore solving a practical bottleneck for EDF.

Data security and privacy issues are magnified by the volume, the variety, and the velocity of Big Data and by the lack, up to now, of a reference data model and related data manipulation languages. In this paper, we focus on one of the key data security services, that is, access control, by highlighting the differences with traditional data management systems and describing a set of requirements that any access control solution for Big Data platforms may fulfill. We then describe the state of the art and discuss open research issues.

The research in this paper refers to two areas: programming and data storage (data base) for computing the weighted Moore–Penrose inverse. The main aim of this paper analysis of the execution speed of computing using PHP programming language and data store. The research shows that the speed of execution gives considerable difference between the Procedural programming and Object Oriented PHP language, on the middle layer in the three tier of the web architecture. Also, the research concerning the comparison of relation database system, MySQL and NoSQL , key value store system, ApacheCassandra , on the database layer. The CPU times are compared and discussed.

Recently, the log-structured merge-tree (LSM-tree) has been widely adopted for use in the storage layer of modern NoSQL systems. Because of this, there have been a large number of research efforts, from both the database community and the operating systems community, that try to improve various aspects of LSM-trees. In this paper, we provide a survey of recent research efforts on LSM-trees so that readers can learn the state of the art in LSM-based storage techniques. We provide a general taxonomy to classify the literature of LSM-trees, survey the efforts in detail, and discuss their strengths and trade-offs. We further survey several representative LSM-based open-source NoSQL systems and discuss some potential future research directions resulting from the survey.

Natural products (NPs) are small molecules produced by living organisms with potential applications in pharmacology and other industries as many of them are bioactive. This potential raised great interest in NP research around the world and in different application fields, therefore, over the years a multiplication of generalistic and thematic NP databases has been observed. However, there is, at this moment, no online resource regrouping all known NPs in just one place, which would greatly simplify NPs research and allow computational screening and other in silico applications. In this manuscript we present the online version of the COlleCtion of Open Natural prodUcTs (COCONUT): an aggregated dataset of elucidated and predicted NPs collected from open sources and a web interface to browse, search and easily and quickly download NPs. COCONUT web is freely available at https://coconut.naturalproducts.net .

Developing Big Data applications has become increasingly important in the last few years. In fact, several organizations from different sectors depend increasingly on knowledge extracted from huge volumes of data. However, in Big Data context, traditional data techniques and platforms are less efficient. They show a slow responsiveness and lack of scalability, performance and accuracy. To face the complex Big Data challenges, much work has been carried out. As a result, various types of distributions and technologies have been developed. This paper is a review that survey recent technologies developed for Big Data. It aims to help to select and adopt the right combination of different Big Data technologies according to their technological needs and specific applications’ requirements. It provides not only a global view of main Big Data technologies but also comparisons according to different system layers such as Data Storage Layer, Data Processing Layer, Data Querying Layer, Data Access Layer and Management Layer. It categorizes and discusses main technologies features, advantages, limits and usages.