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The Behavior and Ecology of Pacific Salmon and Trout combines in-depth scientific information with outstanding photographs and original artwork to fully describe the fish species critical to the Pacific Rim. This completely revised and updated edition covers all aspects of the life cycle of these remarkable fish in the Pacific: homing migration from the open ocean through coastal waters and up rivers to their breeding grounds; courtship and reproduction; the lives of juvenile salmon and trout in rivers and lakes; migration to the sea; the structure of fish populations; and the importance of fish carcasses to the ecosystem. The book also includes information on salmon and trout transplanted outside their ranges.Fisheries expert Thomas P. Quinn writes with clarity and enthusiasm to interest a wide range of readers, including biologists, anglers, and naturalists. He provides the most current science available as well as perspectives on the past, present, and future of Pacific salmon and trout.In this edition:Over 100 beautiful color photographs of salmon and troutUpdated information on all aspects of the salmon and trout life cycleExpanded coverage of trout

Describes the lives of offspring during the months they spend incubating in gravel, growing in fresh water, and migrating out to sea to mature.

Fish that are produced in hatcheries often produce fewer surviving adult offspring than do wild fish when both spawn in the wild. This difference in fitness is likely due to inadvertent selection for adaptation to the hatchery environment. Size at release is positively correlated with survival at sea. Therefore, selection should favor traits that promote fast growth in the hatchery even if those traits are maladaptive in the wild. In that case, changing hatchery conditions to reduce the variance in size at release would reduce the opportunity for domestication selection. Here we test whether grading by size and raising each size group separately can substantially reduce the variance in size at release. We graded a mix of 15 full-sibling families of winter run steelhead ( Oncorhynchus mykiss ) juveniles (initial n = 375 fish/tank) into small, medium, and large body size groups. We then promoted growth in the initially-small fish with excess food and low densities, and slowed growth in the initially-large fish with restricted feedings and high densities. We successfully held back the growth of the initially-large fish, but the initially-small fish never caught up with the controls, despite being raised under ideal conditions. This result suggests that inherent physiological or behavioral factors, rather than interactions with larger fish, restrict the growth of small fish. Both the total variance among individual fish and the variance among family means was reduced by the grading treatment, although only the reduction in total variance among individuals was statistically significant when comparing intraclass correlation values (ICC). The reduced variance due to slowing the growth of the initially-large fish indicates that grading could possibly be a tool used by hatcheries to lessen selection on salmonids. However, it would first be necessary to better understand the factors limiting growth in the smaller fish.

Variability in animal migratory behavior is expected to influence fitness, but few empirical examples demonstrating this relationship exist. The initial marine phase in the migration of juvenile salmon smolts has been identified as a potentially critical life history stage to overall population productivity, yet how fine-scale migration routes may influence survival are unknown. Large-scale acoustic telemetry studies have estimated survival rates of outmigrant Pacific salmon smolts through the Strait of Georgia (SOG) along the British Columbian coastline to the Pacific Ocean, but these data have not been used to identify and characterize fine-scale movements. Data collected on over 850 sockeye salmon (Oncorhynchus nerka) and steelhead (Oncorhynchus mykiss) smolts detected at an array in the Strait of Georgia in 2004-2008 and 2010-2013 were analyzed to characterize migration routes and link movements to subsequent survival at an array 250 km further along the marine migration pathway. Both species exhibited disproportionate use of the most eastern route in the Strait of Georgia (Malaspina Strait). While many smolts moved across the northern Strait of Georgia acoustic array with no indication of long-term milling or large-scale east-to-west movements, large proportions (20-40% of sockeye and 30-50% of steelhead) exhibited a different behavior, apparently moving in a westward or counterclockwise pattern. Variability in migratory behavior for both species was linked to subsequent survival through the Strait of Georgia. Survival for both species was influenced by initial east-to-west location, and sockeye were further influenced by migration timing and duration of time spent near the northern Strait of Georgia array. Westward movements result in a net transport of smolts from Malaspina Strait to the Strait of Georgia, particularly for steelhead. Counterclockwise movements may be due to the currents in this area during the time of outmigration, and the higher proportion of steelhead smolts exhibiting this counterclockwise behavior may reflect a greater exposure to wind-altered currents for the more surface-oriented steelhead. Our results provide an empirical example of how movements can affect migration survival, for which examples remain rare in movement ecology, confirming that variability in movements themselves are an important part of the migratory process.

This paper synthesizes tagging studies to highlight the current state of knowledge concerning the behaviour and survival of anadromous salmonids in the marine environment. Scientific literature was reviewed to quantify the number and type of studies that have investigated behaviour and survival of anadromous forms of Pacific salmon (Oncorhynchus spp.), Atlantic salmon (Salmo salar), brown trout (Salmo trutta), steelhead (Oncorhynchus mykiss), and cutthroat trout (Oncorhynchus clarkii). We examined three categories of tags including electronic (e.g. acoustic, radio, archival), passive (e.g. external marks, Carlin, coded wire, passive integrated transponder [PIT]), and biological (e.g. otolith, genetic, scale, parasites). Based on 207 papers, survival rates and behaviour in marine environments were found to be extremely variable spatially and temporally, with some of the most influential factors being temperature, population, physiological state, and fish size. Salmonids at all life stages were consistently found to swim at an average speed of approximately one body length per second, which likely corresponds with the speed at which transport costs are minimal. We found that there is relatively little research conducted on open-ocean migrating salmonids, and some species (e.g. masu [O. masou] and amago [O. rhodurus]) are underrepresented in the literature. The most common forms of tagging used across life stages were various forms of external tags, coded wire tags, and acoustic tags, however, the majority of studies did not measure tagging/handling effects on the fish, tag loss/failure, or tag detection probabilities when estimating survival. Through the interdisciplinary application of existing and novel technologies, future research examining the behaviour and survival of anadromous salmonids could incorporate important drivers such as oceanography, tagging/handling effects, predation, and physiology.

1. Indigenous people are considered to be among the most vulnerable to food insecurity and biodiversity loss. Biodiversity is cited as a key component of indigenous food security; however, quantitative examples of this linkage are limited. 2. We examined how species and population diversity influence the food security of indigenous fisheries for Pacific salmon (Oncorhynchus species). We compared two dimensions of food security - catch stability (interannual variability) and access (season length) - across a salmon diversity gradient for 21 fisheries on the Fraser River, Canada, over 30 years, using linear regression models. We used population diversity proxies derived from a range of existing measures because population-specific data were unavailable. 3. While both population and species diversity were generally associated with higher catch stability and temporal access, population diversity had a stronger signal. Fisheries with access to high species diversity had up to 1·4 times more stable catch than predicted by the portfolio effect and up to 1·2 times longer fishing seasons than fisheries with access to fewer species. Fisheries with access to high population diversity had up to 3·8 times more stable catch and three times longer seasons than fisheries with access to fewer populations. 4. Catch stability of Chinook Oncorhynchus tshawytscha and sockeye Oncorhynchus nerka fisheries was best explained by the number of populations and conservation units, respectively, that migrate past a fishery en route to spawning grounds. Similar population diversity metrics were important explanatory variables for season length of sockeye, pink Oncorhynchus gorbuscha, coho Oncorhynchus kisutch and chum Oncorhynchus keta fisheries. 5. Synthesis and applications. We show an empirical example of how multiple scales of biodiversity support food security across a large watershed and suggest that protecting fine-scale salmon diversity will help promote food security for indigenous people. The scales of environmental assessments need to match the scales of the socio-ecological processes that will be affected by development. We illustrate that upstream projects that damage salmon habitat could degrade the food security of downstream indigenous fisheries, with implications to Canadian indigenous people and to watersheds around the world where migratory fishes support local fisheries.

Sustainable aquaculture, which entails proportional replacement of fish-based feed sources by plant-based ingredients, is impeded by the poor growth response frequently seen in fish fed high levels of plant ingredients. This study explores the potential to improve, by means of early nutritional exposure, the growth of fish fed plant-based feed. Rainbow trout swim-up fry were fed for 3 weeks either a plant-based diet (diet V, V-fish) or a diet containing fishmeal and fish oil as protein and fat source (diet M, M-fish). After this 3-wk nutritional history period, all V- or M-fish received diet M for a 7-month intermediate growth phase. Both groups were then challenged by feeding diet V for 25 days during which voluntary feed intake, growth, and nutrient utilisation were monitored (V-challenge). Three isogenic rainbow trout lines were used for evaluating possible family effects. The results of the V-challenge showed a 42% higher growth rate (P = 0.002) and 30% higher feed intake (P = 0.005) in fish of nutritional history V compared to M (averaged over the three families). Besides the effects on feed intake, V-fish utilized diet V more efficiently than M-fish, as reflected by the on average 18% higher feed efficiency (P = 0.003). We noted a significant family effect for the above parameters (P<0.001), but the nutritional history effect was consistent for all three families (no interaction effect, P>0.05). In summary, our study shows that an early short-term exposure of rainbow trout fry to a plant-based diet improves acceptance and utilization of the same diet when given at later life stages. This positive response is encouraging as a potential strategy to improve the use of plant-based feed in fish, of interest in the field of fish farming and animal nutrition in general. Future work needs to determine the persistency of this positive early feeding effect and the underlying mechanisms.

Estimating diet composition is important for understanding interactions between predators and prey and thus illuminating ecosystem function. The diet of many species, however, is difficult to observe directly. Genetic analysis of fecal material collected in the field is therefore a useful tool for gaining insight into wild animal diets. In this study, we used high-throughput DNA sequencing to quantitatively estimate the diet composition of an endangered population of wild killer whales (Orcinus orca) in their summer range in the Salish Sea. We combined 175 fecal samples collected between May and September from five years between 2006 and 2011 into 13 sample groups. Two known DNA composition control groups were also created. Each group was sequenced at a ~330bp segment of the 16s gene in the mitochondrial genome using an Illumina MiSeq sequencing system. After several quality controls steps, 4,987,107 individual sequences were aligned to a custom sequence database containing 19 potential fish prey species and the most likely species of each fecal-derived sequence was determined. Based on these alignments, salmonids made up >98.6% of the total sequences and thus of the inferred diet. Of the six salmonid species, Chinook salmon made up 79.5% of the sequences, followed by coho salmon (15%). Over all years, a clear pattern emerged with Chinook salmon dominating the estimated diet early in the summer, and coho salmon contributing an average of >40% of the diet in late summer. Sockeye salmon appeared to be occasionally important, at >18% in some sample groups. Non-salmonids were rarely observed. Our results are consistent with earlier results based on surface prey remains, and confirm the importance of Chinook salmon in this population's summer diet.