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Volatile halogenated organic compounds containing bromine and iodine, which are naturally produced in the ocean, are involved in ozone depletion in both the troposphere and stratosphere. Three prominent compounds transporting large amounts of marine halogens into the atmosphere are bromoform (CHBr3), dibromomethane (CH2Br2) and methyl iodide (CH3I). The input of marine halogens to the stratosphere has been estimated from observations and modelling studies using low-resolution oceanic emission scenarios derived from top-down approaches. In order to improve emission inventory estimates, we calculate data-based high resolution global sea-to-air flux estimates of these compounds from surface observations within the HalOcAt (Halocarbons in the Ocean and Atmosphere) database (https://halocat.geomar.de/). Global maps of marine and atmospheric surface concentrations are derived from the data which are divided into coastal, shelf and open ocean regions. Considering physical and biogeochemical characteristics of ocean and atmosphere, the open ocean water and atmosphere data are classified into 21 regions. The available data are interpolated onto a 1°×1° grid while missing grid values are interpolated with latitudinal and longitudinal dependent regression techniques reflecting the compounds' distributions. With the generated surface concentration climatologies for the ocean and atmosphere, global sea-to-air concentration gradients and sea-to-air fluxes are calculated. Based on these calculations we estimate a total global flux of 1.5/2.5 Gmol Br yr−1 for CHBr3, 0.78/0.98 Gmol Br yr−1 for CH2Br2 and 1.24/1.45 Gmol Br yr−1 for CH3I (robust fit/ordinary least squares regression techniques). Contrary to recent studies, negative fluxes occur in each sea-to-air flux climatology, mainly in the Arctic and Antarctic regions. \"Hot spots\" for global polybromomethane emissions are located in the equatorial region, whereas methyl iodide emissions are enhanced in the subtropical gyre regions. Inter-annual and seasonal variation is contained within our flux calculations for all three compounds. Compared to earlier studies, our global fluxes are at the lower end of estimates, especially for bromoform. An under-representation of coastal emissions and of extreme events in our estimate might explain the mismatch between our bottom-up emission estimate and top-down approaches.

The benefits of the complex microscopic and industrially important group of microalgae such as diatoms is not hidden and have lately surprised the scientific community with their industrial potential. The ability to survive in harsh conditions and the presence of different pore structures and defined cell walls have made diatoms ideal cell machinery to produce a variety of industrial products. The prospect of using a diatom cell for industrial application has increased significantly in synch with the advances in microscopy, metabarcoding, analytical and genetic tools. Furthermore, it is well noted that the approach of industry and academia to the use of genetic tools has changed significantly, resulting in a well-defined characterization of various molecular components of diatoms. It is possible to conduct the primary culturing, harvesting, and further downstream processing of diatom culture in a cost-effective manner. Diatoms hold all the qualities to become the alternative raw material for pharmaceutical, nanotechnology, and energy sources leading to a sustainable economy. In this review, an attempt has been made to gather important progress in the different industrial applications of diatoms such as biotechnology, biomedical, nanotechnology, and environmental technologies.

In the past, diatoms were considered the primary food source for copepods in both wild and aquaculture settings. However, recent studies have found that diatoms have defense mechanisms against predators, making them unsuitable as copepod feed. This study assessed the impact of addition of 100 μg L −1 of silicate to an inorganic nutrition formula containing 700 μg L −1 nitrogen, 100 μg L −1 phosphorus, and 100 μg L −1 iron. Our objective was to assess the impact of increased diatom abundance on copepod production. The experiment was carried out in 1000 L outdoor tanks over a period of 20 days, with adult Pseudodiaptomus annandalei copepods, introduced into each tank on the second day at an initial density of 10 ind. L −1 . The results indicated that adding silicate reduced the prevalence of Chlorophyta, replaced by a higher proportion of Dinophyta, and eventually dominated by diatoms. While silicate had a positive effect on diatom culture, it had a negative effect on copepod production. Adding silicate to the inorganic fertilization method resulted in increased costs, leading to a significant increase in the unit production cost of copepods.

Sea spray aerosol particles are a recognised type of ice-nucleating particles under mixed-phase cloud conditions. Entities that are responsible for the heterogeneous ice nucleation ability include intact or fragmented cells of marine microorganisms as well as organic matter released by cell exudation. Only a small fraction of sea spray aerosol is transported to the upper troposphere, but there are indications from mass-spectrometric analyses of the residuals of sublimated cirrus particles that sea salt could also contribute to heterogeneous ice nucleation under cirrus conditions. Experimental studies on the heterogeneous ice nucleation ability of sea spray aerosol particles and their proxies at temperatures below 235 K are still scarce. In our article, we summarise previous measurements and present a new set of ice nucleation experiments at cirrus temperatures with particles generated from sea surface microlayer and surface seawater samples collected in three different regions of the Arctic and from a laboratory-grown diatom culture (Skeletonema marinoi). The particles were suspended in the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) cloud chamber and ice formation was induced by expansion cooling. We confirmed that under cirrus conditions, apart from the ice-nucleating entities mentioned above, also crystalline inorganic salt constituents can contribute to heterogeneous ice formation. This takes place at temperatures below 220 K, where we observed in all experiments a strong immersion freezing mode due to the only partially deliquesced inorganic salts. The inferred ice nucleation active surface site densities for this nucleation mode reached a maximum of about 5×1010 m−2 at an ice saturation ratio of 1.3. Much smaller densities in the range of 108–109 m−2 were observed at temperatures between 220 and 235 K, where the inorganic salts fully deliquesced and only the organic matter and/or algal cells and cell debris could contribute to heterogeneous ice formation. These values are 2 orders of magnitude smaller than those previously reported for particles generated from microlayer suspensions collected in temperate and subtropical zones. While this difference might simply underline the strong variability of the number of ice-nucleating entities in the sea surface microlayer across different geographical regions, we also discuss how instrumental parameters like the aerosolisation method and the ice nucleation measurement technique might affect the comparability of the results amongst different studies.

Turbulence is one of the ubiquitous aspects of aquatic systems and affects many physical and biological processes. Based on direct velocity measurements and a computational fluid dynamics (CFD) simulation, we characterized the distribution of the turbulent kinetic dissipations rates (ε) in an orbital shaker system within a range of rotation frequencies. CFD was able to estimate the ε distribution in containers accurately, which was confirmed by other two methods and was independent of velocity measurement. The results showed that ε was linearly correlated with the rotational frequencies. Despite the existence of gradients of ε and the fact that a mean circular horizontal flow was formed within the tank, the energy levels of the whole tank varied spatially within an order of magnitude and the ε distributions at different rotational frequencies were similar, suggesting that the ε distribution in the whole tank could be seen as quasi-homogeneous. To investigate the influence of turbulence on algae growth, culture experiments of a typical diatom—Skeletonema costatum were carried out under different turbulence conditions. Our results suggested turbulence mixing promoted nutrient uptake and growth of Skeletonema costatum, which could be attributed to the break of the diffusion-limited resource concentration boundary layer surrounding phytoplankton.

One of the as yet unresolved questions in microalgae chemical ecology is the role(s) of diatom-derived polyunsaturated aldehydes (PUA), whose biosynthesis increases with culture age and in response to nitrogen stress. The study by Eastabrook et al reveal complex interplays within the diatom culture microbomes, influenced by culture age, nitrogen state and, importantly, the availability of PUA, thus providing evidence that PUA are important in structuring the bacterial communities associated with bloom forming diatoms.

Recent studies have suggested that the viral lysis of microbes not only facilitates the conversion of particulate organic matter into dissolved organic matter, but also promotes the formation of organic aggregates, which enhance the export of organic carbon from the surface ocean to the deep sea. However, experimental data supporting this proposition are limited. Here, we tested the hypothesis that the viral infection of marine diatoms enhances aggregate formation. We used a model system consisting of Chaetoceros tenuissimus, a bloom-forming diatom with an approximate cell size of 3–10 µm, and a DNA virus, CtenDNAV type II, which replicates in the nucleus of C. tenuissimus. The volume of large particles (50–400 µm in equivalent spherical diameters, determined from photographic images) was measured over time (up to 15 days) in the diatom-alone control and a virus-added diatom culture. We also determined the concentrations of Coomassie-stainable particles (CSP, proteinaceous particles) and transparent exopolymeric particles (TEP, acid-polysaccharide-rich particles) with colorimetric methods. The total volume of large particles was significantly higher (5–59 fold) in the virus-added diatoms than in the diatom-alone control during the period in which the viral lysis of the diatoms proceeded. One class of large particles produced in the virus-added diatoms was flake-shaped. The flakes were tightly packed and dense, and sank rapidly, possibly playing an important role in the vertical delivery of materials from the surface to the deep sea. The bulk CSP concentrations tended to be higher in the virus-added diatoms than in the diatom-alone control, whereas the reverse was true for the TEP. These results suggest that proteinaceous polymers are involved in aggregate formation. Our data support the emerging notion that the viral lysis of microbes facilitates aggregate formation and the export of organic carbon in the ocean.

Through a combination of selective extractions and molecular characterization techniques including Isoelectric Focusing Chromatography and Electrospray Ionization Fourier-Transform Ion Cyclotron Resonance Mass spectrometry, molecular structures of diatom ( Phaeodactylum tricornutum ) and coccolithophore ( Emiliania huxleyi )-associated biopolymers that are responsible for the distinct partitioning behavior between 210 Pb and 210 Po were determined. Our results show that diatom-derived biopolymers have distinctive elemental grouping distributions as compared to those excreted by the coccolithophore, with the former consisting of more heterogeneous elements (i.e., nitrogen, sulfur and phosphorus-containing organic compounds). For the coccolithophore culture, two 210 Pb-enriched biopolymers (non-attached exopolymeric substances and coccosphere shell-associated biopolymers) have a higher abundance of CHO-type compounds, suggesting CHO-only-type compounds as the main binding moieties for 210 Pb. In contrast, such association was not evident in the diatom culture. Different with 210 Pb, 210 Po enrichment in coccolithophore-derived attached exopolymeric substances and Fe-Mn-associated metabolites coincided with the higher abundance of nitrogen/sulfur-containing organic compounds in these two biopolymer fractions, suggesting the strong parallel of Po with the production of nitrogen-rich organic matter as well as sulfur-containing amino acids. These different associations between 210 Pb/ 210 Po and organic functional groups were further explored by separating 210 Pb or 210 Po-labeled coccolithophore-derived biopolymers via isoelectric focusing. This technique suggests that phosphate group-containing molecules but not the other molecules that contain heterogeneous elements (e.g., CHONS, CHON, and CHOS) as the strongest binding agents for 210 Pb, while the more hydrophobic (high protein to carbohydrate ratio) nitrogen/sulfur-enriched organic moieties acted as the main 210 Po-binding ligands. It is concluded that the deficiency of 210 Po with respect to 210 Pb can be influenced by the relative abundance of nitrogen/sulfur-enriched organic moieties to the nitrogen/sulfur-depleted organic compounds in the water column. This behavior constrains the application of 210 Po- 210 Pb approach to quantify the particulate organic carbon (POC) export flux in the ocean. It also explains that differences in chemical binding of the 210 Po as compared to those of other radionuclides (e.g., thorium-234) as the main factor. That suggests that differences in decay half-lives or physical factors are less important when these nuclides are applied to estimate the POC flux in the ocean.

We present the first report and description of the pinnate diatom sp. from the northeastern Adriatic Sea, Croatia, producing a blue pigment. This organism is very similar to the well-known , the first described “blue” diatom producing marennine, i.e. the pigment involved in the greening of oysters, and recently described . . However, the Croatian diatom slightly differs from other species in its morphology and 18S rRNA sequence. The discovery of sp. from Croatia confirmed the possible existence of more species among the representatives of blue species, as previously assumed. The discovery of several genetically distinct populations of , new species . , . and sp. from Croatia, suggests that species richness in the group of “blue” diatoms is probably underestimated and still more new blue diatoms remain undiscovered. This also raises questions about previously published reports and observations of distribution in the Mediterranean Sea whether these organisms really belong to .

The effects of nitrate, ammonium and phosphate on the abundance, chlorophyll a content (chl a), in vivo fluorescence, particulate organic carbon, nitrogen, phosphorus and cell morphology of the diatom Skeletonema costatum, the dinoflagellate Prorocentrum micans and the coccolithophore Emiliania huxleyi were investigated in the laboratory. The carbon:chlorophyll a ratio (as weight), a parameter often used in productivity estimates, differed substantially among the three species as well as at different nutrient concentrations at the end of the exponential growth phase. The cell chl a content was higher in the earlier phases of growth in all three species in agreement with previous investigations. Average chl a content per cell during the experiments was higher in P. micans (8 pg) than in S. costatum (0.4 pg) and E. huxleyi (0.2 pg). However, chl a content per unit volume was higher in E. huxleyi (~15 fg μm^sup -3^) than in S. costatum (~7 fg μm^sup -3^) and P. micans (~1 fg μm^sup -3^). Prorocentrum micans cultures reached the highest total biovolume (74 mm^sup 3^ L^sup -1^ and was 3 and 5 times higher than S. costatum and E. huxleyi cultures, respectively) under high nutrient concentrations. Nevertheless, total chl a concentration of S. costatum culture was almost twice higher (122 μg L^sup -1^) than that of the other two species at the end of the exponential growth phase. Phosphate consumption by S. costatum occurred at higher rates compared to the other two species during the experimental period, probably showing that this nutrient was more favourable for this species. Our findings from these laboratory experiments emphasize that chl a values in the natural habitat may not accurately indicate actual phytoplankton biomass.[PUBLICATION ABSTRACT]