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"Pentanes - analysis"
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Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth
2018
Isoprene (2-methyl-1,3-butadiene), the most abundantly produced biogenic volatile organic compound (BVOC) on Earth, is highly reactive and can have diverse and often detrimental atmospheric effects, which impact on climate and health. Most isoprene is produced by terrestrial plants, but (micro)algal production is important in aquatic environments, and the relative bacterial contribution remains unknown. Soils are a sink for isoprene, and bacteria that can use isoprene as a carbon and energy source have been cultivated and also identified using cultivation-independent methods from soils, leaves and coastal/marine environments. Bacteria belonging to the Actinobacteria are most frequently isolated and identified, and Proteobacteria have also been shown to degrade isoprene. In the freshwater-sediment isolate,
Rhodococcus
strain AD45, initial oxidation of isoprene to 1,2-epoxy-isoprene is catalyzed by a multicomponent isoprene monooxygenase encoded by the genes
isoABCDEF
. The resultant epoxide is converted to a glutathione conjugate by a glutathione
S
-transferase encoded by
isoI
, and further degraded by enzymes encoded by
isoGHJ
. Genome sequence analysis of actinobacterial isolates belonging to the genera
Rhodococcus, Mycobacterium
and
Gordonia
has revealed that
isoABCDEF
and
isoGHIJ
are linked in an operon, either on a plasmid or the chromosome. In
Rhodococcus
strain AD45 both isoprene and epoxy-isoprene induce a high level of transcription of 22 contiguous genes, including
isoABCDEF
and
isoGHIJ
. Sequence analysis of the
isoA
gene, encoding the large subunit of the oxygenase component of isoprene monooxygenase, from isolates has facilitated the development of PCR primers that are proving valuable in investigating the ecology of uncultivated isoprene-degrading bacteria.
Journal Article
Photochemical reflectance index as an indirect estimator of foliar isoprenoid emissions at the ecosystem level
by
Peñuelas, Josep
,
LLusia, Joan
,
Farré-Armengol, Gerard
in
704/106/35
,
704/158/47
,
704/172/169/895
2013
Terrestrial plants re-emit around 1–2% of the carbon they fix as isoprene and monoterpenes. These emissions have major roles in the ecological relationships among living organisms and in atmospheric chemistry and climate, and yet their actual quantification at the ecosystem level in different regions is far from being resolved with available models and field measurements. Here we provide evidence that a simple remote sensing index, the photochemical reflectance index, which is indicative of light use efficiency, is a good indirect estimator of foliar isoprenoid emissions and can therefore be used to sense them remotely. These results open new perspectives for the potential use of remote sensing techniques to track isoprenoid emissions from vegetation at larger scales. On the other hand, our study shows the potential of this photochemical reflectance index technique to validate the availability of photosynthetic reducing power as a factor involved in isoprenoid production.
Isoprene and monoterpenes, emitted by terrestrial plants, have an important role in both plant biology and environment, but they are poorly quantified at the ecosystem level. Peñuelas
et al.
show that the photochemical reflectance index can be used to indirectly estimate foliar isoprenoid emissions remotely.
Journal Article
Breath Isoprene Sensor Based on Quartz-Enhanced Photoacoustic Spectroscopy
by
Abou Naoum, Fadia Abou
,
Pages, Fanny
,
Diaz-Thomas, Daniel Andres
in
Acoustics
,
Adult
,
Bioengineering
2025
Isoprene, the most abundant endogenous hydrocarbon in human breath, is a promising biomarker for metabolic and cardiovascular diseases. In this paper, we present the detection of isoprene in exhaled breath using the off-beam Quartz-Enhanced Photoacoustic Spectroscopy (QEPAS) method. The sensor employs a homemade quantum cascade laser emitting at 11.03 μm. We use numerical simulations to evaluate the impact of interfering gases (CO2 and H2O) and optimize the laser modulation parameters. The limit of detection reached for 1 s acquisition time is close to 220 parts per billion in volume (ppbv) with a normalized noise equivalent absorption (NNEA) of 1.1×10−8cm−1·W·Hz−1/2. Breath measurements conducted on healthy volunteers reveal a significant increase in isoprene concentration from resting levels (~250–350 ppbv) to elevated levels (~450–650 ppbv) after moderate physical exercise.
Journal Article
Optimal seasonal schedule for the production of isoprene, a highly volatile biogenic VOC
2024
The leaves of many trees emit volatile organic compounds (abbreviated as BVOCs), which protect them from various damages, such as herbivory, pathogens, and heat stress. For example, isoprene is highly volatile and is known to enhance the resistance to heat stress. In this study, we analyze the optimal seasonal schedule for producing isoprene in leaves to mitigate damage. We assume that photosynthetic rate, heat stress, and the stress-suppressing effect of isoprene may vary throughout the season. We seek the seasonal schedule of isoprene production that maximizes the total net photosynthesis using Pontryagin’s maximum principle. The isoprene production rate is determined by the changing balance between the cost and benefit of enhanced leaf protection over time. If heat stress peaks in midsummer, isoprene production can reach its highest levels during the summer. However, if a large portion of leaves is lost due to heat stress in a short period, the optimal schedule involves peaking isoprene production after the peak of heat stress. Both high photosynthetic rate and high isoprene volatility in midsummer make the peak of isoprene production in spring. These results can be clearly understood by distinguishing immediate impacts and the impacts of future expectations.
Journal Article
Secondary organic aerosols over oceans via oxidation of isoprene and monoterpenes from Arctic to Antarctic
2013
Isoprene and monoterpenes are important precursors of secondary organic aerosols (SOA) in continents. However, their contributions to aerosols over oceans are still inconclusive. Here we analyzed SOA tracers from isoprene and monoterpenes in aerosol samples collected over oceans during the Chinese Arctic and Antarctic Research Expeditions. Combined with literature reports elsewhere, we found that the dominant tracers are the oxidation products of isoprene. The concentrations of tracers varied considerably. The mean average values were approximately one order of magnitude higher in the Northern Hemisphere than in the Southern Hemisphere. High values were generally observed in coastal regions. This phenomenon was ascribed to the outflow influence from continental sources. High levels of isoprene could emit from oceans and consequently have a significant impact on marine SOA as inferred from isoprene SOA during phytoplankton blooms, which may abruptly increase up to 95 ng/m
3
in the boundary layer over remote oceans.
Journal Article
New particle formation in forests inhibited by isoprene emissions
by
Mentel, Thomas F.
,
Wildt, Jürgen
,
Kleist, Einhard
in
Aerosols
,
Aerosols - analysis
,
Aerosols - metabolism
2009
Atmospheric chemistry: forest isoprene clears the air
Terrestrial vegetation releases vast amounts of volatile organic compounds (VOCs) into the atmosphere, mainly isoprene and derivatives such as monoterpenes and sesquiterpenes, some familiar as the aroma of pine trees. It has been suggested that these compounds are involved in the formation of organic aerosols, which act as 'seeds' for cloud formation and hence as cooling agents via an effect on radiative forcing. Experiments in a plant chamber simulating forest conditions show that isoprene can significantly inhibit new particle formation owing to its high hydroxyl radical reactivity. This surprising result may explain the observed seasonality in the frequency of aerosol nucleation events, as terpene emissions peak in summer, when there are fewer nucleation events than in autumn and spring. This work suggests that an increase in the isoprene content of VOCs in response to climate or land use change might reduce the potential for the formation of new aerosol particles, introducing a previously unrecognized element of climate warming.
Volatile organic compounds, such as isoprene and monoterpenes, are emitted by terrestrial vegetation and have been suggested to be involved in organic aerosol formation, which in turn affects radiative forcing and climate. Simulation experiments conducted in a plant chamber now reveal that isoprene can significantly inhibit new particle formation; this may explain the observed seasonality in the frequency of aerosol nucleation events.
It has been suggested that volatile organic compounds (VOCs) are involved in organic aerosol formation, which in turn affects radiative forcing and climate
1
. The most abundant VOCs emitted by terrestrial vegetation are isoprene and its derivatives, such as monoterpenes and sesquiterpenes
2
. New particle formation in boreal regions is related to monoterpene emissions
3
and causes an estimated negative radiative forcing
4
of about -0.2 to -0.9 W m
-2
. The annual variation in aerosol growth rates during particle nucleation events correlates with the seasonality of monoterpene emissions of the local vegetation, with a maximum during summer
5
. The frequency of nucleation events peaks, however, in spring and autumn
5
. Here we present evidence from simulation experiments conducted in a plant chamber that isoprene can significantly inhibit new particle formation. The process leading to the observed decrease in particle number concentration is linked to the high reactivity of isoprene with the hydroxyl radical (OH). The suppression is stronger with higher concentrations of isoprene, but with little dependence on the specific VOC mixture emitted by trees. A parameterization of the observed suppression factor as a function of isoprene concentration suggests that the number of new particles produced depends on the OH concentration and VOCs involved in the production of new particles undergo three to four steps of oxidation by OH. Our measurements simulate conditions that are typical for forested regions and may explain the observed seasonality in the frequency of aerosol nucleation events, with a lower number of nucleation events during summer compared to autumn and spring
5
. Biogenic emissions of isoprene are controlled by temperature and light
2
, and if the relative isoprene abundance of biogenic VOC emissions increases in response to climate change or land use change, the new particle formation potential may decrease, thus damping the aerosol negative radiative forcing effect.
Journal Article
Spatial and seasonal variations of isoprene secondary organic aerosol in China: Significant impact of biomass burning during winter
2016
Isoprene is a substantial contributor to global secondary organic aerosol (SOA). The formation of isoprene SOA (SOA
I
) is highly influenced by anthropogenic emissions. Currently, there is rare information regarding SOA
I
in polluted regions. In this study, one-year concurrent observation of SOA
I
tracers was undertaken at 12 sites across China for the first time. The tracers formed from the HO
2
-channel exhibited higher concentrations at rural sites, while the tracer formed from the NO/NO
2
-channel showed higher levels at urban sites. 3-Methyltetrahydrofuran-3,4-diols exhibited linear correlations with their ring-opening products, C
5
-alkenetriols. And the slopes were steeper in the southern China than the northern China, indicating stronger ring-opening reactions there. The correlation analysis of SOA
I
tracers with the factor determining biogenic emission and the tracer of biomass burning (levoglucosan) implied that the high level of SOA
I
during summer was controlled by biogenic emission, while the unexpected increase of SOA
I
during winter was largely due to the elevated biomass burning emission. The estimated secondary organic carbon from isoprene (SOC
I
) exhibited the highest levels in Southwest China. The significant correlations of SOC
I
between paired sites implied the regional impact of SOA
I
in China. Our findings implicate that isoprene origins and SOA
I
formation are distinctive in polluted regions.
Journal Article
FEV manoeuvre induced changes in breath VOC compositions: an unconventional view on lung function tests
2016
Breath volatile organic compound (VOC) analysis can open a non-invasive window onto pathological and metabolic processes in the body. Decades of clinical breath-gas analysis have revealed that changes in exhaled VOC concentrations are important rather than disease specific biomarkers. As physiological parameters, such as respiratory rate or cardiac output, have profound effects on exhaled VOCs, here we investigated VOC exhalation under respiratory manoeuvres. Breath VOCs were monitored by means of real-time mass-spectrometry during conventional FEV manoeuvres in 50 healthy humans. Simultaneously, we measured respiratory and hemodynamic parameters noninvasively. Tidal volume and minute ventilation increased by 292 and 171% during the manoeuvre. FEV manoeuvre induced substance specific changes in VOC concentrations. pET-CO
2
and alveolar isoprene increased by 6 and 21% during maximum exhalation. Then they decreased by 18 and 37% at forced expiration mirroring cardiac output. Acetone concentrations rose by 4.5% despite increasing minute ventilation. Blood-borne furan and dimethyl-sulphide mimicked isoprene profile. Exogenous acetonitrile, sulphides, and most aliphatic and aromatic VOCs changed minimally. Reliable breath tests must avoid forced breathing. As isoprene exhalations mirrored FEV performances, endogenous VOCs might assure quality of lung function tests. Analysis of exhaled VOC concentrations can provide additional information on physiology of respiration and gas exchange.
Journal Article
Observed suppression of ozone formation at extremely high temperatures due to chemical and biophysical feedbacks
by
Owen, Robert C.
,
Davis, Adam J.
,
Michalak, Anna M.
in
Air quality
,
Air temperature
,
Atmospheric chemistry
2010
Ground level ozone concentrations ([O₃]) typically show a direct linear relationship with surface air temperature. Three decades of California measurements provide evidence of a statistically significant change in the ozone-temperature slope (Δm O3-T ) under extremely high temperatures (>312 K). This Δm O3-T leads to a plateau or decrease in [O₃], reflecting the diminished role of nitrogen oxide sequestration by peroxyacetyl nitrates and reduced biogenic isoprene emissions at high temperatures. Despite inclusion of these processes in global and regional chemistry-climate models, a statistically significant change in Δm O3-T has not been noted in prior studies. Future climate projections suggest a more frequent and spatially widespread occurrence of this Δm O3-T response, confounding predictions of extreme ozone events based on the historically observed linear relationship.
Journal Article
The Impact of a Graded Maximal Exercise Protocol on Exhaled Volatile Organic Compounds: A Pilot Study
by
Thomas, C. L. Paul
,
Heaney, Liam M.
,
Kang, Shuo
in
Adult
,
Breath Tests - methods
,
Butadienes - analysis
2022
Exhaled volatile organic compounds (VOCs) are of interest due to their minimally invasive sampling procedure. Previous studies have investigated the impact of exercise, with evidence suggesting that breath VOCs reflect exercise-induced metabolic activity. However, these studies have yet to investigate the impact of maximal exercise to exhaustion on breath VOCs, which was the main aim of this study. Two-litre breath samples were collected onto thermal desorption tubes using a portable breath collection unit. Samples were collected pre-exercise, and at 10 and 60 min following a maximal exercise test (VO2MAX). Breath VOCs were analysed by thermal desorption-gas chromatography-mass spectrometry using a non-targeted approach. Data showed a tendency for reduced isoprene in samples at 10 min post-exercise, with a return to baseline by 60 min. However, inter-individual variation meant differences between baseline and 10 min could not be confirmed, although the 10 and 60 min timepoints were different (p = 0.041). In addition, baseline samples showed a tendency for both acetone and isoprene to be reduced in those with higher absolute VO2MAX scores (mL(O2)/min), although with restricted statistical power. Baseline samples could not differentiate between relative VO2MAX scores (mL(O2)/kg/min). In conclusion, these data support that isoprene levels are dynamic in response to exercise.
Journal Article