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1. Light pollution is rapidly increasing and can have deleterious effects on biodiversity, yet light types differ in their effect on wildlife. Among the light types used for street lamps, lightemitting diodes (LEDs) are expected to become globally predominant within the next few years. 2. In a large-scale field experiment, we recorded bat activity at 46 street lights for 12 nights each and investigated how the widespread replacement of conventional illuminants by LEDs affects urban bats: we compared bat activity at municipal mercury vapour (MV) street lamps that were replaced by LEDs with control sites that were not changed. 3. Pipistrellus pipistrellus was the most frequently recorded species; it was 45% less active at LEDs than at MV street lamps, but the activity did not depend on illuminance level. Light type did not affect the activity of Pipistrellus nathusii, Pipistrellus pygmaeus or bats in the Nyctalus/Eptesicus/Vespertilio (NEV) group, yet the activity of P. nathusii increased with illuminance level. Bats of the genus Myotis increased activity 4-5-fold at LEDs compared with MV lights, but illuminance level had no effect. 4. Decreased activity of P. pipistrellus, which are considered light tolerant, probably paralleled insect densities around lights. Further, our results suggest that LEDs may be less repelling for light-averse Myotis spp. than MV lights. Accordingly, the transition from conventional lighting techniques to LEDs may greatly alter the anthropogenic impact of artificial light on urban bats and might eventually affect the resilience of urban bat populations. 5. Synthesis and applications. At light-emitting diodes (LEDs), the competitive advantage — the exclusive ability to forage on insect aggregations at lights — is reduced for light-tolerant bats. Thus, the global spread of LED street lamps might lead to a more natural level of competition between light-tolerant and light-averse bats. This effect could be reinforced if the potential advantages of LEDs over conventional illuminants are applied in practice: choice of spectra with relatively little energy in the short wavelength range; reduced spillover by precisely directing light; dimming during low human activity times; and control by motion sensors. Yet, the potential benefits of LEDs could be negated if low costs foster an overall increase in artificial lighting.

Urban watercourses are an essential part of blue-green infrastructure (BGI) that can mitigate the negative impact of habitat loss resulting from urbanization. Many studies on temperate urban bats activity did not concern its seasonal variations. Our work evaluated the bats’ activity and occurrence in different urban riverside environments throughout the vegetation period. Our results showed that long-range echolocators were represented mainly by Nyctalus noctula. Their activity peak occurred in late summer in open habitats of high anthropogenic pressure levels, and at least part of the population was present year-round in the city. Recently reported from Cracow: Hypsugo savii and Pipistrellus kuhlii were confirmed in the medium-range echolocators. The high occurrence of P. pygmeus with a relatively low P. pipistrellus was noteworthy and is probably a result of the low competitiveness of the latter in the presence of P. kuhlii. Two spring and late summer activity peaks on different rivers suggest different migration corridors from and to hibernacula. However, the autumn activity in the city center may also indicate partial hibernation in the old town. The activity peak of short-range echolocators occurred in spring, as expected - mainly in a narrow riverbed and low anthropogenic pressure environments. However, ambiguous spring and late summer activity in the open with the highest anthropogenic pressure environment may result from the rapidly progressing synurbization of M. daubentonii. Our results indicate the need to monitor the bat adaptation process to the cities in the context of dynamic climatic and environmental changes.

Urbanisation is one of the most dramatic forms of land use change which relatively few species can adapt to. Determining how and why species respond differently to urban habitats is important in predicting future biodiversity loss as urban areas rapidly expand. Understanding how morphological or behavioural traits can influence species adaptability to the built environment may enable us to improve the effectiveness of conservation efforts. Although many bat species are able to exploit human resources, bat species richness generally declines with increasing urbanisation and there is considerable variation in the responses of different bat species to urbanisation. Here, we use acoustic recordings from two cryptic, and largely sympatric European bat species to assess differential responses in their use of fragmented urban woodland and the surrounding urban matrix. There was a high probability of P. pygmaeus activity relative to P. pipistrellus in woodlands with low clutter and understory cover which were surrounded by low levels of built environment. Additionally, the probability of recording P. pygmaeus relative to P. pipistrellus was considerably higher in urban woodland interior or edge habitat in contrast to urban grey or non-wooded green space. These results show differential habitat use occurring between two morphologically similar species; whilst the underlying mechanism for this partitioning is unknown it may be driven by competition avoidance over foraging resources. Their differing response to urbanisation indicates the difficulties involved when attempting to assess how adaptable a species is to urbanisation for conservation purposes.

Context Light pollution is a global change affecting a major proportion of global land surface. Although the impacts of Artificial Light At Night (ALAN) have been documented locally for many taxa, the extent of effect of ALAN at a landscape scale on biodiversity is unknown. Objectives We characterized the landscape-scale impacts of ALAN on 4 insectivorous bat species Pipistrellus pipistrellus , Pipistrellus kuhlii , Eptesicus serotinus , Nyctalus leisleri , and compared the extent of their effects to other major land-use pressures. Methods We used a French national-scale monitoring program recording bat activity among 2-km car transect surveys, and extracted landscape characteristics around transects with satellite and land cover layers. For each species, we performed multi-model averaging at 4 landscape scales (from 200 to 1000 m buffers around transects) to compare the relative effects of the average radiance, the proportion of impervious surface and the proportion of intensive agriculture. Results For all species, ALAN had a stronger negative effect than impervious surface at the 4 landscape scales tested. This effect was weaker than the effect of intensive agriculture. The negative effect of ALAN was significant for P.   pipistrellus , P.   kuhlii and E.   serotinus , but not for N.   leisleri . The effect of impervious surface varied among species while intensive agriculture had a significant negative effect on the 4 species. Conclusion Our results highlight the need to consider the impacts of ALAN on biodiversity in land-use planning and suggest that using only impervious surface as a proxy for urbanization may lead to underestimated impacts on biodiversity.

Despite the key importance of the landscape matrix for bats, we still not fully understand how the effect of forest composition interacts at combined stand and landscape scales to shape bat communities. In addition, we lack detailed knowledge on the effects of local habitat structure on batprey relationships in forested landscapes. We tested the assumptions that (i) forest composition has interacting effects on bats between stand and landscape scales; and (ii) stand structure mediates prey abundance effects on bat activity. Our results indicated that in conifer-dominated landscapes (> 80% of coniferous forests) bat activity was higher in stands with a higher proportion of deciduous trees while bats were less active in stands with a higher proportion of deciduous trees in mixed forest landscapes (~ 50% of deciduous forests). Moth abundance was selected in the best models for six among nine bat species. The positive effect of moth abundance on Barbastella barbastellus was mediated by vegetation clutter, with dense understory cover likely reducing prey accessibility. Altogether, our findings deepen our understanding of the ecological processes affecting bats in forest landscapes and strengthen the need to consider both landscape context and trophic linkage when assessing the effects of stand-scale compositional and structural attributes on bats.

A novel human coronavirus (HCoV-EMC/2012) was isolated from a man with acute pneumonia and renal failure in June 2012. This report describes the complete genome sequence, genome organization, and expression strategy of HCoV-EMC/2012 and its relation with known coronaviruses. The genome contains 30,119 nucleotides and contains at least 10 predicted open reading frames, 9 of which are predicted to be expressed from a nested set of seven subgenomic mRNAs. Phylogenetic analysis of the replicase gene of coronaviruses with completely sequenced genomes showed that HCoV-EMC/2012 is most closely related to Tylonycteris bat coronavirus HKU4 (BtCoV-HKU4) and Pipistrellus bat coronavirus HKU5 (BtCoV-HKU5), which prototype two species in lineage C of the genus Betacoronavirus. In accordance with the guidelines of the International Committee on Taxonomy of Viruses, and in view of the 75% and 77% amino acid sequence identity in 7 conserved replicase domains with BtCoV-HKU4 and BtCoV-HKU5, respectively, we propose that HCoV-EMC/2012 prototypes a novel species in the genus Betacoronavirus. HCoV-EMC/2012 may be most closely related to a coronavirus detected in Pipistrellus pipistrellus in The Netherlands, but because only a short sequence from the most conserved part of the RNA-dependent RNA polymerase-encoding region of the genome was reported for this bat virus, its genetic distance from HCoV-EMC remains uncertain. HCoV-EMC/2012 is the sixth coronavirus known to infect humans and the first human virus within betacoronavirus lineage C. Coronaviruses are capable of infecting humans and many animal species. Most infections caused by human coronaviruses are relatively mild. However, the outbreak of severe acute respiratory syndrome (SARS) caused by SARS-CoV in 2002 to 2003 and the fatal infection of a human by HCoV-EMC/2012 in 2012 show that coronaviruses are able to cause severe, sometimes fatal disease in humans. We have determined the complete genome of HCoV-EMC/2012 using an unbiased virus discovery approach involving next-generation sequencing techniques, which enabled subsequent state-of-the-art bioinformatics, phylogenetics, and taxonomic analyses. By establishing its complete genome sequence, HCoV-EMC/2012 was characterized as a new genotype which is closely related to bat coronaviruses that are distant from SARS-CoV. We expect that this information will be vital to rapid advancement of both clinical and vital research on this emerging pathogen.

Abstract A total of 10 specimens were captured from selected sites of Bajaur Agency FATA, Pakistan using mist nets. The captured specimens were morphologically identified and various morphometric measurements were taken. The head and Body length (HB) of Pipistrellus coromondra and Pipistrellus kuhlii lepidus (n=10) was 43±0.11 mm and 45±1.1 respectively. Morphologically identified Pipistrellus kuhlii confirmed as Pipistrellus kuhlii lepidus based on 16S rRNA sequences. The DNA sequences were submitted to GenBank and accession numbers were obtained (MN 719478 and MT430902). The available 16S rRNA gene sequences of Pipistrellus coromondra and Pipistrellus kuhlii lepidus were retrieved from NCBI and incorporated in N-J tree analysis. Overall, the interspecific genetic variations among Pipistrellus coromondra and Pipistrellus kuhlii lepidus were 8% and 1% respectively. In our recommendation, a comprehensive molecular identification of bats is need of hour to report more cryptic and new species from Pakistan. Resumo Um total de 10 espécimes foi capturado em locais selecionados da Bajaur Agency FATA, Paquistão, usando redes de neblina. Os espécimes capturados foram identificados morfologicamente e várias medidas morfométricas foram realizadas. O comprimento da cabeça e do corpo (HB) de Pipistrellus coromondra e Pipistrellus kuhlii lepidus (n = 10) foi de 43 ± 0,11 mm e 45 ± 1,1, respectivamente. Pipistrellus kuhlii identificado morfologicamente e confirmado como Pipistrellus kuhlii lepidus com base em sequências de rRNA 16S. As sequências de DNA foram submetidas ao GenBank e os números de acesso foram obtidos (MN 719478 e MT430902). As sequências do gene 16S rRNA disponíveis de Pipistrellus coromondra e Pipistrellus kuhlii lepidus foram recuperadas do NCBI e incorporadas na análise da árvore N-J. No geral, as variações genéticas interespecíficas entre Pipistrellus coromondra e Pipistrellus kuhlii lepidus foram de 8% e 1%, respectivamente. Em nossa recomendação, uma identificação molecular abrangente de morcegos precisa de uma hora para relatar mais espécies crípticas e novas do Paquistão.

A two years survey extending from June 2014 through May 2016 was conducted in Bajaur Agency which forms the northern part of Federally Administered Tribal Areas (FATA) and never explored for chiropteran diversity prior to the present study. Five congeners namely common Pipistrelle Pipistrellus pipistrellus, Javan Pipistrelle P. javanicus, Coromandel Pipistrelle P. coromandra, least Pipistrelle P. tenuis and Kelaart’s Pipistrelle P. ceylonicus were recorded for the first time from the study area. Average forearm length of P. pipistrellus, P. javanicus, P. coromandra, P. tenuis and P. ceylonicus was recorded 30.9±0.14mm, 35.13±0.53mm, 31.64±1.19mm, 28.49±1.25mm and 40.11±2.24mm, respectively. The greatest length of skull of these species was 11.75±0.35mm, 13.69±0.25mm, 12.48±0.34mm, 11.83±0.30mm and 15.00±0.15mm, respectively while their total bacular length was 1.58mm, 3.81±0.01mm, 3.82±0.47mm, 2.11±0.707mm and 5.83±2.15mm, respectively. The shape and size of the bacula were the characters that helped in clear cut identification of these bat species.

Animals modify their behaviours and interactions in response to changing environments. In bats, environmental adaptations are reflected in echolocation signalling that is used for navigation, foraging and communication. However, the extent and drivers of echolocation plasticity are not fully understood, hindering our identification of bat species with ultrasonic detectors, particularly for cryptic species with similar echolocation calls. We used a combination of DNA barcoding, intensive trapping, roost and emergence surveys and acoustic recording to study a widespread European cryptic species complex (Pipistrellus pipistrellus and Pipistrellus pygmaeus) to investigate whether sibling bat species could exhibit extreme echolocation plasticity in response to certain environmental conditions or behaviours. We found that P. pygmaeus occupied the acoustic niche of their absent congeneric species, producing calls with P. pipistrellus’ characteristic structure and peak frequencies and resulting in false positive acoustic records of that species. Echolocation frequency was significantly affected by the density of bats and by maternity rearing stage, with lower frequency calls emitted when there was a high density of flying bats, and by mothers while juveniles were non-volant. During roost emergence, 29% of calls had peak frequencies typical of P. pipistrellus, with calls as low as 44 kHz, lower than ever documented. We show that automatic and manual call classifiers fail to account for echolocation plasticity, misidentifying P. pygmaeus as P. pipistrellus. Our study raises a vital limitation of using only acoustic sampling in areas with high densities of a single species of a cryptic species pair, with important implications for bat monitoring.

This paper is a bibliographical survey of records of bat parasites in France (including Corsica) between 1762 and 2018. In total, 237 scientific publications were analysed. They show that bats are infected with a large diversity of endoparasites and ectoparasites. A total of 113 parasite taxa were identified from 27 host species; in addition, six bats were not identified to the species-level. The helminth fauna of bats comprises three species of Cestoda, 15 of Trematoda, and 13 of Nematoda. Acari parasites include 53 species (in addition to 22 invalid species). Finally, insect parasites comprise 13 species of Diptera (bat flies), 12 of Siphonaptera (fleas), 3 of Hemiptera (bugs), and 1 Anoplura species. Bat taxa reported with parasites were Barbastella barbastellus, Eptesicus serotinus, Hypsugo savii, Miniopterus schreibersii, Myotis bechsteinii, M. blythii, M. capaccinii, M. dasycneme, M. daubentonii, M. emarginatus, M. myotis, M. mystacinus, M. nattereri, M. punicus, Nyctalus lasiopterus, N. leisleri, N. noctula, Pipistrellus kuhlii, P. nathusii, P. pipistrellus, Plecotus auritus, P. austriacus, Rhinolophus euryale, R. ferrumequinum, R. hipposideros, R. mehelyi, Tadarida teniotis, Eptesicus sp., Myotis sp., Pipistrellus sp., Plecotus sp., Rhinolophus sp. and the species complex Pipistrellus pipistrellus/kuhlii/nathusii . As regards E. nilssonii, Vespertilio murinus (Particoloured Bat) , M. alcathoe, M. escalerai, P. macrobullaris and P. pygmaeus, no records were found. These published field data originated from 72 of the 96 departments in metropolitan France. The most commonly cited were Ardèche, Ariège, Bouches-du-Rhône, Haute-Savoie, Maine-et-Loire, Moselle, Meurthe-et-Moselle, Pyrénées-Orientales, Sarthe, Haute-Corse and Corse-du-Sud. Cet article est une étude bibliographique des signalements de parasites de chauves-souris en France (y compris la Corse) entre 1762 et 2018. Au total, 237 publications scientifiques ont été analysées. Elles montrent que les chauves-souris sont infectées par une grande diversité d’endoparasites et d’ectoparasites. Un total de 113 taxons parasites ont été identifiés parmi 27 espèces hôtes (en outre, six chauves-souris n’ont pas été identifiées au niveau de l’espèce). La faune helminthique des chauves-souris comprend trois espèces de Cestodes, 15 de Trématodes et 13 de Nématodes. Les Acariens parasites comprennent 53 espèces (en plus de 22 espèces invalides). Enfin, les insectes parasites comprennent 13 espèces de Diptères, 12 de Siphonaptères (puces), 3 d’Hémiptères (punaises) et 1 espèce d’Anoploure. Les taxons de chauves-souris signalés avec des parasites étaient Barbastella barbastellus, Eptesicus serotinus, Hypsugo savii, Miniopterus schreibersii, Myotis bechsteinii, M. blythii, M. capaccinii, M. dasycneme, M. daubentonii, M. emarginatus, M. myotis, M. mystacinus, M. nattereri, M. punicus, Nyctalus lasiopterus, N. leisleri, N. noctula, Pipistrellus kuhlii, P. nathusii, P. pipistrellus, Plecotus auritus, P. austriacus, Rhinolophus euryale, R. ferrumequinum, R. hipposideros, R. mehelyi, Tadarida teniotis, Eptesicus sp., Myotis sp., Pipistrellus sp., Plecotus sp., Rhinolophus sp. et le complexe d’espèces cryptiques Pipistrellus pipistrellus/kuhlii/nathusii . Aucun signalement n’a été trouvé pour E. nilssonii, Vespertilio murinus, M. alcathoe, M. escalerai, P. macrobullaris et P. pygmaeus . Ces données de terrain publiées proviennent de 72 des 96 départements de France métropolitaine. Les plus cités sont l’Ardèche, l’Ariège, les Bouches-du-Rhône, la Haute-Savoie, le Maine-et-Loire, la Moselle, la Meurthe-et-Moselle, les Pyrénées-Orientales, la Sarthe, la Haute-Corse et la Corse-du-Sud.