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1. Understanding the processes by which species sort themselves into communities remains a central puzzle for attempts to maintain biodiversity. It remains unclear whether any single assembly process is generally dominant or whether the influence of contrasting processes varies in a predictable way relative to biotic and abiotic gradients. Abundance-weighted niche overlap between species provides a powerful means of contrasting two major assembly processes - niche complementarity and environmental filtering. 2. We examined mean overlap for four vegetative functional traits, relative to that expected when abundances were randomly allocated to species co-occurring in experimental plots in a wet meadow. This provided a test of whether any single assembly process prevailed for the meadow as a whole and across all traits. The effects of mowing, fertilization and dominant species removal, and associated gradients of Simpson's dominance and biomass on the niche overlap of plots, were also examined. 3. Niche overlap was higher than expected at random for three of the four traits studied (height, leaf and stem dry matter content, leaf C:N ratio). However, niche overlap was lower than expected for specific leaf area. 4. Mowing was the treatment with the greatest effect on both niche overlap and biomass, with overlap significantly lower in the absence of mowing for three of the traits, while biomass was lower in mown plots. For three of the traits there was evidence of a significant decrease in overlap with increasing biomass, but not increasing dominance. None of the significant mowing effects on overlap remained when the effect of biomass had been removed. 5. Synthesis: These results suggest that the importance of niche differences between species in structuring grassland communities should increase with increasing biomass and decrease with disturbance in grassland communities. They also emphasize that contrasting community assembly processes may occur for different niche axes, even within a single community.

1. Ecologists debate the importance of neutral versus niche-based explanations for patterns of species coexistence and whether small-scale data can inform ecological understanding of communities, referred to by McNaughton [Ecological Monographs, 1983, 53, 291] as ‘ecology's cruel dilemma.' Research on phylogenetic relationships, traits and species co-occurrence has attempted to address this topic, with results considerably mixed. 2. We address the hypothesis that plant community assembly is influenced by trait similarity across ecological gradients and this affects mean phylogenetic distance (MPD) of species within sites. We analysed specific leaf area (SLA), maximum plant height and phylogenetic relationships among Serengeti grasses, a system ideally suited to study community assembly because of an ecological gradient in which the dominant plant stress shifts from drought to light competition. 3. Phylogenetic community assembly theory predicts that MPD would be lowest (under-dispersed) at dry sites and greatest (over-dispersed) at sites with higher rainfall. Similarly, theory predicts that low soil nutrient concentrations should filter intolerant species, so that MPD is expected to be under-dispersed at infertile, low-elevation sites and over-dispersed at fertile, higher-elevation sites. However, as gradients of rainfall and soil fertility run counter to one another across the Serengeti, it was unclear how this covariation would influence MPD. 4. Surprisingly, traits showed different evolutionary patterns: SLA displayed convergent evolution while maximum plant height displayed Brownian evolution across the phylogeny. As predicted, statistically under-dispersed assemblages occurred at lower rainfall, infertile sites while statistically over-dispersed assemblages occurred at higher rainfall, fertile sites. However, the pattern across all plots was weak, with most plots showing no statistical pattern of MPD. 5. Multivariate analyses using structural equation modelling, which statistically controlled for covariation among environmental effects, revealed complex direct and indirect effects of environmental variation on MPD, including offsetting direct effects of SLA and maximum plant height due to their different patterns of trait evolution. 6. Synthesis. Spatially counteracting gradients of moisture and soil fertility across the Serengeti, combined with contrasting patterns of trait evolution, obscured the relationship between MPD and any single environmental variable. Our study shows that integrating trait and phylogenetic relationships across ecological gradients yields considerable insight into the ecological mechanisms that determine community composition, but that multivariate techniques may be required to appropriately reveal such patterns.

Summary 1. Worldwide, the floristic composition of temperate forests bears the imprint of past land use for decades to centuries as forests regrow on agricultural land. Many species, however, display significant interregional variation in their ability to (re)colonize post‐agricultural forests. This variation in colonization across regions and the underlying factors remain largely unexplored. 2. We compiled data on 90 species and 812 species × study combinations from 18 studies across Europe that determined species’ distribution patterns in ancient (i.e. continuously forested since the first available land use maps) and post‐agricultural forests. The recovery rate (RR) of species in each landscape was quantified as the log‐response ratio of the percentage occurrence in post‐agricultural over ancient forest and related to the species‐specific life‐history traits and local (soil characteristics and light availability) and regional factors (landscape properties as habitat availability, time available for colonization, and climate). 3. For the herb species, we demonstrate a strong (interactive) effect of species’ life‐history traits and forest habitat availability on the RR of post‐agricultural forest. In graminoids, however, none of the investigated variables were significantly related to the RR. 4. The better colonizing species that mainly belonged to the short‐lived herbs group showed the largest interregional variability. Their recovery significantly increased with the amount of forest habitat within the landscape, whereas, surprisingly, the time available for colonization, climate, soil characteristics and light availability had no effect. 5. Synthesis. By analysing 18 independent studies across Europe, we clearly showed for the first time on a continental scale that the recovery of short‐lived forest herbs increased with the forest habitat availability in the landscape. Small perennial forest herbs, however, were generally unsuccessful in colonizing post‐agricultural forest – even in relatively densely forested landscapes. Hence, our results stress the need to avoid ancient forest clearance to preserve the typical woodland flora.

1. Fire is an integral process in savannas because it plays a crucial role in altering woody cover of this globally important biome. 2. In this study, we examine the long-term effects of varying fire frequencies over a 60-year time period in South Africa. We analyse the effects of fire exclusion and of experimental burns every 1, 2 and 3 years on woody cover, tree abundance and stem structure on a wet and dry savanna. 3. Increased fire frequency did not display a consistent effect on woody cover. The presence of fire, irrespective of frequency, was much more influential in lowering tree abundance in the wet savanna than the dry savanna. In the dry savanna, fire was more effective in greatly increasing coppicing in trees, when compared to the wet savannas. 4. Synthesis. The effects of fire on three measures of savanna woody vegetation differed between wet and dry experimental sites. We suggest that vegetation responses to fire are dependent on local conditions, which are likely influenced by rainfall. Therefore, we suggest that management strategies should take account of whether a savanna is a wet or dry system when implementing fire management regimes.

1. As global climate changes and the world population increases, agriculture faces an enormous challenge to increase food production in an equitable and sustainable manner. Principles and concepts derived directly from plant ecological research can help meet this challenge. 2. This series of 10 mini-reviews considers some of the key ways that plant ecologists can help inform and contribute to meeting this challenge. 3. The papers are grouped into three main themes of plant ecology, namely plant community diversity and structure, plant population dynamics and plant interactions, and plant-soil (below-ground) interactions. 4. Synthesis. We identify a number of important knowledge gaps in areas where plant ecological research can contribute towards improving yield, nutrition, ecosystem services and environmental resilience of agricultural systems. However, the adoption of plant ecological principles in sustainable agriculture will require practical approaches to their implementation along with improved understanding of social and economic barriers.

1. Our aim was to explore plant-soil feedback in mixed grassland communities and its significance for plant productivity and community composition relative to abiotic factors of soil type and fertility. 2. We carried out a 4-year, field-based mesocosm experiment to determine the relative effects of soil type, historic management intensity and soil conditioning by a wide range of plant species of mesotrophic grassland on the productivity and evenness of subsequent mixed communities. 3. The study consisted of an initial soil conditioning phase, whereby soil from two locations each with two levels of management intensity was conditioned with monocultures of nine grassland species, and a subsequent feedback phase, where mixed communities of the nine species were grown in conditioned soil to determine relative effects of experimental factors on the productivity and evenness of mixed communities and individual plant species performance. 4. In the conditioning phase of the experiment, individual plant species differentially influenced soil microbial communities and nutrient availability. However, these biotic effects were much less important as drivers of soil microbial properties and nutrient availability than were abiotic factors of soil type and fertility. 5. Significant feedback effects of conditioning were detected during the second phase of the study in terms of individual plant growth in mixed communities. These feedback effects were generally independent of soil type or fertility, and were consistently negative in nature. In most cases, individual plant species performed less well in mixed communities planted in soil that had previously supported their own species. 6. Synthesis. These findings suggest that despite soil abiotic factors acting as major drivers of soil microbial communities and nutrient availability, biotic interactions in the form of negative feedback play a significant role in regulating individual plant performance in mixed grassland communities across a range of soil conditions.

Arable weeds are key organisms for biodiversity maintenance and ecosystem service provision in agroecosystems. Disentangling the drivers of weed diversity is critical to counteract the global decline of farmland biodiversity. Even if distinct scale-dependent processes were alternatively proposed, no general framework unifying the multi-scale drivers of weed dynamics has yet emerged. Here, we investigate the joint effects of field- and landscape-scale processes on weed assemblages in 444 arable fields. First, field margins sheltered greater weed diversity than field core, evidencing their role as biodiversity refugia. Second, community similarity between field core and margin decreased with the distance to margin, highlighting a major role of local dispersal. Third, weed diversity at field margins increased with organic field cover in the landscape, pointing out massive regional dispersal. Fourth, while both local and landscape dispersal explained up to 41% of field core weed diversity, crop type strongly modulated their strength, depicting an intense filtering effect by agricultural management. This study sheds new light on the complex multi-scale interactions shaping weed diversity, field margins playing a key role by strengthening regional dispersal and sustaining local dispersal. Land-sharing strategies improving habitat heterogeneity both locally and regionally should largely promote agroecosystem multifunctionality and sustainability.

Overgrazing substantially contributes to global grassland degradation by decreasing plant community productivity and diversity through trampling, defoliation, and removal of nutrients. Arbuscular mycorrhizal (AM) fungi also play a critical role in plant community diversity, composition, and primary productivity, maintaining ecosystem functions. However, interactions between grazing disturbances, such as trampling and defoliation, and AM fungi in grassland communities are not well known. We examined influences of trampling, defoliation, and AM fungi on semiarid grassland plant community composition for 3 yr, by comparing all combinations of these factors. Benomyl fungicide was applied to reduce AM fungal abundance. Overgrazing typically resulted in reduced dominance of Stipa Krylovii, contributing to degradation of typical steppe grasslands. Our results indicated trampling generally had little effect on plant community composition, unless combined with defoliation or AM fungal suppression. Defoliation was the main component of grazing that promoted dominance of Potentilla acaulis over Stipa krylovii and Artemisia frigida, presumably by alleviating light limitation. In non-defoliated plots, AM fungi promoted A. frigida, with a concomitant reduction in S. krylovii growth compared to corresponding AM suppressed plots. Our results indicate AM fungi and defoliation jointly suppress S. krylovii biomass; however, prolonged defoliation weakens mycorrhizal influence on plant community composition. These findings give new insight into dominant plant species shifts in degraded semiarid grasslands.

Foundational cushion plants can re-organize community structures and sustain a prominent proportion of alpine biodiversity, but they are sensitive to climate change. The loss of cushion species can have broad consequences for associated biota. The potential plant community changes with the population dynamics of cushion plants remain, however, unclear. Using eight plant communities along a climatic and community successional gradient, we assessed cushion population dynamics, the underlying ecological constraints and hence associated plant community changes in alpine communities dominated by the foundational cushion plant Arenaria polytrichoides . The population dynamics of Arenaria are attributed to ecological constraints at a series of life history stages. Reproductive functions are constrained by increasing associated beneficiary plants; subsequent seedling establishment is constrained by temperature, water and light availability, extreme climate events, and interspecific competition; strong competitive exclusion may accelerate mortality and degeneration of cushion populations. Along with cushion dynamics, species composition, abundance and community structure gradually change. Once cushion plants completely degenerate, previously cushion-dominated communities shift to relatively stable communities that are overwhelmingly dominated by sedges. Climate warming may accelerate the degeneration process of A. polytrichoides . Degeneration of this foundational cushion plant will possibly induce massive changes in alpine plant communities and hence ecosystem functions in alpine ecosystems. The assessment of the population dynamics of foundation species is critical for an effective conservation of alpine biodiversity.

Forest dynamic models predict the current and future states of ecosystems and are a nexus between physiological processes and empirical data, forest plot inventories and remote-sensing information. The problem of biodiversity representation in these models has long been an impediment to a detailed understanding of ecosystem processes. This challenge is amplified in species-rich and high-carbon tropical forests. Here we describe an individual-based and spatially explicit forest growth simulator, TROLL, that integrates recent advances in plant physiology. Processes (carbon assimilation, allocation, reproduction, and mortality) are linked to species-specific functional traits, and the model was parameterized for an Amazonian tropical rainforest. We simulated a forest regeneration experiment from bare soil, and we validated it against observations at our sites. Simulated forest regeneration compared well with observations for stem densities, gross primary productivity, aboveground biomass, and floristic composition. After 500 years of regrowth, the simulated forest displayed structural characteristics similar to observations (e.g., leaf area index and trunk diameter distribution). We then assessed the model's sensitivity to a number of key model parameters: light extinction coefficient and carbon quantum yield, and to a lesser extent mortality rate, and carbon allocation, all influenced ecosystem features. To illustrate the potential of the approach, we tested whether variation in species richness and composition influenced ecosystem properties. Overall, species richness had a positive effect on ecosystem processes, but this effect was controlled by the identity of species rather by richness per se. Also, functional trait community means had a stronger effect than functional diversity on ecosystem processes. TROLL should be applicable to many tropical forests sites, and data requirement is tailored to ongoing trait collection efforts. Such a model should foster the dialogue between ecology and the vegetation modeling community, help improve the predictive power of models, and eventually better inform policy choices.