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8,483 result(s) for "Recording instruments"
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Rewritable multi-event analog recording in bacterial and mammalian cells
Recording cellular events could advance our understanding of cellular history and responses to stimuli. The construction of intracellular memory devices, however, is challenging. Tang and Liu used Cas9 nucleases and base editors to record amplitude, duration, and order of stimuli as stable changes in both genomic and extrachromosomal DNA content (see the Perspective by Ho and Bennett). The recording of multiple stimuli—including exposure to antibiotics, nutrients, viruses, and light, as well as Wnt signaling—was achieved in living bacterial and human cells. Recorded memories could be erased and re-recorded over multiple cycles. Science , this issue p. eaap8992 ; see also p. 150 Base editors and CRISPR nucleases generate “cell data recorders” that enable durable, analog, rewritable recording of multiple stimuli. We present two CRISPR-mediated analog multi-event recording apparatus (CAMERA) systems that use base editors and Cas9 nucleases to record cellular events in bacteria and mammalian cells. The devices record signal amplitude or duration as changes in the ratio of mutually exclusive DNA sequences (CAMERA 1) or as single-base modifications (CAMERA 2). We achieved recording of multiple stimuli in bacteria or mammalian cells, including exposure to antibiotics, nutrients, viruses, light, and changes in Wnt signaling. When recording to multicopy plasmids, reliable readout requires as few as 10 to 100 cells. The order of stimuli can be recorded through an overlapping guide RNA design, and memories can be erased and re-recorded over multiple cycles. CAMERA systems serve as “cell data recorders” that write a history of endogenous or exogenous signaling events into permanent DNA sequence modifications in living cells.
Molecular recording of mammalian embryogenesis
Ontogeny describes the emergence of complex multicellular organisms from single totipotent cells. This field is particularly challenging in mammals, owing to the indeterminate relationship between self-renewal and differentiation, variation in progenitor field sizes, and internal gestation in these animals. Here we present a flexible, high-information, multi-channel molecular recorder with a single-cell readout and apply it as an evolving lineage tracer to assemble mouse cell-fate maps from fertilization through gastrulation. By combining lineage information with single-cell RNA sequencing profiles, we recapitulate canonical developmental relationships between different tissue types and reveal the nearly complete transcriptional convergence of endodermal cells of extra-embryonic and embryonic origins. Finally, we apply our cell-fate maps to estimate the number of embryonic progenitor cells and their degree of asymmetric partitioning during specification. Our approach enables massively parallel, high-resolution recording of lineage and other information in mammalian systems, which will facilitate the construction of a quantitative framework for understanding developmental processes. A multi-channel molecular recording technique is applied as a lineage tracer to assemble cell-fate maps from fertilization through gastrulation in the mouse, providing insights into ontogeny in a complex multicellular organism.
Two-photon lithography for 3D magnetic nanostructure fabrication
Ferromagnetic materials have been utilized as recording media in data storage devices for many decades. The confinement of a material to a two-dimensional plane is a significant bottleneck in achieving ultra-high recording densities, and this has led to the proposition of three-dimensional (3D) racetrack memories that utilize domain wall propagation along the nanowires. However, the fabrication of 3D magnetic nanostructures of complex geometries is highly challenging and is not easily achieved with standard lithography techniques. Here, we demonstrate a new approach to construct 3D magnetic nanostructures of complex geometries using a combination of two-photon lithography and electrochemical deposition. The magnetic properties are found to be intimately related to the 3D geometry of the structure, and magnetic imaging experiments provide evidence of domain wall pinning at the 3D nanostructured junction.
Study of magnetic properties of Ising nanowires with core–shell structure
The Monte Carlo simulations were used to investigate the ground-state phase diagrams of Ising nanowires for core–shell structure with mixed spins 3/2 and 2. The magnetic phase diagrams obtained found and are dependent of crystal and magnetic fields. Magnetic phase diagrams are dependent of exchange interactions for n -polygon at the surface shell and are dependent also of crystal field. The exchange interaction dependences of magnetization and the transition temperature are calculated by Monte Carlo simulation. The changes of magnetization depending on the crystal field and n -polygon increasing. The phase transition from ordered phase to disordered phase is found. The transitions temperatures are found of each polygon. The magnetic coercive fields, saturations and remanent magnetizations have been deduced for different magnetic parameters. The surface of hysteresis cycle is dependent of the effect of n -polygon, temperature, and exchange interactions. This magnetic behavior offers new perspectives for applications in advanced technologies including spintronics, logic devices and novel magnetic recording media, functionalization and bioengineering and sensor devises. Graphical Abstract Schematic representations of nanowires with core shell structure in the n -polygon
How observations from automatic hail sensors in Switzerland shed light on local hailfall duration and compare with hailpad measurements
Measuring the properties of hailstorms is a difficult task due to the rarity and mainly small spatial extent of the events. Especially, hail observations from ground-based time-recording instruments are scarce. We present the first study of extended field observations made by a network of 80 automatic hail sensors from Switzerland. The main benefits of the sensors are the live recording of the hailstone kinetic energy and the precise timing of the impacts. Its potential limitations include a diameter-dependent dead time, which results in less than 5 % of missed impacts, and the possible recording of impacts that are not due to hail, which can be filtered using a radar reflectivity filter. We assess the robustness of the sensors' measurements by doing a statistical comparison of the sensor observations with hailpad observations, and we show that, despite their different measurement approaches, both devices measure the same hail size distributions. We then use the timing information to measure the local duration of hail events, the cumulative time distribution of impacts, and the time of the largest hailstone during a hail event. We find that 75 % of local hailfalls last just a few minutes (from less than 4.4 min to less than 7.7 min, depending on a parameter to delineate the events) and that 75 % of the impacts occur in less than 3.3 min to less than 4.7 min. This time distribution suggests that most hailstones, including the largest, fall during a first phase of high hailstone density, while a few remaining and smaller hailstones fall in a second low-density phase.
Superstructure magnetic anisotropy in Fe3O4 nanoparticle chains
Magnetic anisotropy is essential for many applications of ferromagnetic/ferrimagnetic materials, including permanent magnets and magnetic recording media. Attempts have been made recently to build up 3-D nanoparticle and quantum dot assemblies, however, it is not understood yet if a nanoparticle assembly can possess high magnetic anisotropy with low anisotropic materials. In this article, we report our discovery of high magnetic anisotropy resulted from Fe 3 O 4 nanoparticle chains. We started with closely-packed nanoparticle assemblies of spherical Fe 3 O 4 nanoparticles that exhibit low magnetocrystalline anisotropy and shape anisotropy, and corresponding negligible coercivity. When the nanoparticle assemblies are compressed under pressure, they form bundles or arrays that consist of Fe 3 O 4 chains with a length scale of several hundred nanometers. Magnetic measurements show that these Fe 3 O 4 chain arrays possess a high uniaxial magnetic anisotropy (K eff ~ 2.9×10 5  J/m³) and significant magnetic coercivity. Our simulations reveal that interparticle magnetic dipolar interactions contribute to this type of superstructure magnetic anisotropy. This study demonstrates the feasibility and approaches to create “patterned” high magnetic anisotropy in nanoparticle superstructures/assemblies. Uniaxial magnetic anisotropy typically arises from either magnetocrystalline anisotropy or shape anisotropy. Here, Mohapatra et al, starting from low anisotropy and coercivity nanoparticles, show how under compression, nanoparticle chains/arrays form which exhibit significantly enhanced uniaxial anisotropy.
Magnetically tuned Ni0.3Co0.7DyxFe2–xO4 ferrites for high-density data storage applications
Dysprosium (Dy 3+ )-substituted Ni–Co nanoparticles were synthesized by sol–gel technique. Structural and morphological analyses were accomplished by X-ray diffraction (XRD), scanning electron microscopy (SEM) and field emission transmission electron microscopy (FE-TEM). The crystallite size and lattice parameter followed a decreasing trend up on increase in Dy 3+ substitution for the concentration x  ≤ 0.15, which is due to the hindrance in crystallite growth and deposition of Dy 3+ on grain boundaries, respectively. The lattice strain was increased from 5.027 to 8.814 × 10 - 3 with enhancement in Dy 3+ content. The morphological studies showed uniform distribution of particles with slight agglomeration and the average particle size was calculated to be 22.17 nm, which is in good agreement with XRD results. The magnetic studies were executed by vibrating sample magnetometer (VSM) over a wide range of applied magnetic field. The soft ferrimagnetic nature of these ferrites was revealed by narrow (M–H) curve. The magnetic parameters exhibited decreasing behavior upon increasing amount of substitution. The coercivity ( H c ) was recorded to be 1097 Oe for x  = 0.00 and saturation magnetization ( M s ) was calculated in the range 27.04–40.86 emu/g. The anisotropy constant and magneton number were found to be in the range of 9887–46,703 erg/cm 3 and 1.21–1.71 µ B , respectively. These properties of prepared ferrites point towards their applicability in magnetic recording instruments, memory, and high-density data storage devices.
Exploring the possible role of satellite-based rainfall data in estimating inter- and intra-annual global rainfall erosivity
Despite recent developments in modeling global soil erosion by water, to date, no substantial progress has been made towards more dynamic inter- and intra-annual assessments. In this regard, the main challenge is still represented by the limited availability of high temporal resolution rainfall data needed to estimate rainfall erosivity. As the availability of high temporal resolution rainfall data will most likely not increase in future decades since the monitoring networks have been declining since the 1980s, the suitability of alternative approaches to estimate global rainfall erosivity using satellite-based rainfall data was explored in this study. For this purpose, we used the high spatial and temporal resolution global precipitation estimates obtained with the National Oceanic and Atmospheric Administration (NOAA) Climate Data Record (CDR) Climate Prediction Center MORPHing (CMORPH) technique. Such high spatial and temporal (30 min) resolution data have not yet been used for the estimation of rainfall erosivity on a global scale. Alternatively, the erosivity density (ED) concept was also used to estimate global rainfall erosivity. The obtained global estimates of rainfall erosivity were validated against the pluviograph data included in the Global Rainfall Erosivity Database (GloREDa). Overall, results indicated that the CMORPH estimates have a marked tendency to underestimate rainfall erosivity when compared to the GloREDa estimates. The most substantial underestimations were observed in areas with the highest rainfall erosivity values. At the continental level, the best agreement between annual CMORPH and interpolated GloREDa rainfall erosivity maps was observed in Europe, while the worst agreement was detected in Africa and South America. Further analyses conducted at the monthly scale for Europe revealed seasonal misalignments, with the occurrence of underestimation of the CMORPH estimates in the summer period and overestimation in the winter period compared to GloREDa. The best agreement between the two approaches to estimate rainfall erosivity was found for fall, especially in central and eastern Europe. Conducted analysis suggested that satellite-based approaches for estimation of rainfall erosivity appear to be more suitable for low-erosivity regions, while in high-erosivity regions (> 1000–2000 MJ mm ha−1 h−1 yr−1) and seasons (> 150–250 MJ mm ha−1 h−1 month−1), the agreement with estimates obtained from pluviographs (GloREDa) is lower. Concerning the ED estimates, this second approach to estimate rainfall erosivity yielded better agreement with GloREDa estimates compared to CMORPH, which could be regarded as an expected result since this approach indirectly uses the GloREDa data. The application of a simple-linear function correction of the CMORPH data was applied to provide a better fit to GloREDa and correct systematic underestimation. This correction improved the performance of CMORPH, but in areas with the highest rainfall erosivity rates, the underestimation was still observed. A preliminary trend analysis of the CMORPH rainfall erosivity estimates was also performed for the 1998–2019 period to investigate possible changes in the rainfall erosivity at a global scale, which has not yet been conducted using high-frequency data such as CMORPH. According to this trend analysis, an increasing and statistically significant trend was more frequently observed than a decreasing trend.
Implantation of Neuropixels probes for chronic recording of neuronal activity in freely behaving mice and rats
How dynamic activity in neural circuits gives rise to behavior is a major area of interest in neuroscience. A key experimental approach for addressing this question involves measuring extracellular neuronal activity in awake, behaving animals. Recently developed Neuropixels probes have provided a step change in recording neural activity in large tissue volumes with high spatiotemporal resolution. This protocol describes the chronic implantation of Neuropixels probes in mice and rats using compact and reusable 3D-printed fixtures. The fixtures facilitate stable chronic in vivo recordings in freely behaving rats and mice. They consist of two parts: a covered main body and a skull connector. Single-, dual- and movable-probe fixture variants are available. After completing an experiment, probes are safely recovered for reimplantation by a dedicated retrieval mechanism. Fixture assembly and surgical implantation typically take 4–5 h, and probe retrieval takes ~30 min, followed by 12 h of incubation in probe cleaning agent. The duration of data acquisition depends on the type of behavioral experiment. Since our protocol enables stable, chronic recordings over weeks, it enables longitudinal large-scale single-unit data to be routinely obtained in a cost-efficient manner, which will facilitate many studies in systems neuroscience. This protocol describes the implantation of Neuropixels probes for chronic recording of neural activity in rats and mice using 3D-printed fixtures. The fixtures enable routine probe reuse, and single-, dual- and movable-probe variants are described.