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17 result(s) for "Rhythm function estimation"
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Effective least squares approximation method for estimating the rhythm function of cyclic random process
The work is devoted to a problem of the rhythm function estimation of a cyclic random process, which is based on the least squares approximation methods instead of well-known interpolation approach. Analytical dependencies between errors of estimation of a discrete rhythm function and errors of segmentation of a cyclic random process into cycles and zones were constructed. This made it possible to develop a procedure for calculating and controlling errors of estimating rhythm function of a cyclic random process as certain functions of errors of the segmentation method. The general problem of least squares approximation of the rhythm function of a cyclic random process is formulated as a problem of optimal selection of a parametric function derived from a predetermined class of functions that satisfy the necessary and sufficient conditions of the rhythm function of a cyclic random process. New parametric classes of rhythm characteristics of cyclic random processes such as parametric monomials of degree k , parametric logarithmic functions and parametric exponential functions have been built. The advantage of considered method over well-known interpolation approach refers to the improvement of accuracy of rhythm function estimation and reduction of the rhythm function estimation parameters’ number. For example, in presented computer simulation experiment for the parametric class of monomials of degree 2, average value of the mean square errors for 500 simulations in the case of the interpolation is over 40 times higher than the corresponding value for approximation. Moreover, for that parametric class, the number of estimated parameters is almost equal to doubled number of considered cycles in the case of piecewise linear interpolation and is reduced to 1 for least square approximation. The results obtained in the work constitute the basis for improvement of rhythm-adaptive methods and spectral analysis of cyclic random processes, including the area of statistical methods for detecting hidden cyclic structures of the investigated cyclic stochastic signals with an irregular rhythm.
Cognitive control in the eye of the beholder: Electrocortical theta and alpha modulation during response preparation in a cued saccade task
The oscillatory dynamics of medial frontal EEG theta and posterior alpha are implicated in the modulation of attention and cognitive control. We used a novel saccade cueing paradigm to examine whether theta and alpha are modulated by task difficulty during response preparation. After isolating and functionally classifying medial frontal and posterior alpha independent components, the EEG spectral power in these components was calculated on pro- and anti-saccade trials prior to response probes. The results of bootstrap re-sampling show that, compared to pro-saccade trials, correct anti-saccades are characterized by an increase in medial frontal theta and suppression of posterior alpha during the response preparation period. Furthermore, an absence of increased medial frontal theta prior to anti-saccades probes occurs on error trials, that is, a failure to control pre-potent eye movements. For these error trials, a burst in medial frontal theta is instead observed following error feedback. Our findings show that enhanced medial frontal theta is linked not only to dynamic cognitive control that is reactive (such as, after error commission), but is also an important prerequisite for success when behavioral control is challenged. •Saccade cueing paradigm to examine oscillatory dynamics of response preparation.•Theta enhanced during response preparation on anti-saccade correct trials.•Alpha reduced during response preparation on anti-saccade correct trials.•Theta also increases following anti-saccade errors.•Medial frontal theta is important prerequisite for response control.
Investigating automated regression models for estimating left ventricular ejection fraction levels in heart failure patients using circadian ECG features
Heart Failure (HF) significantly impacts approximately 26 million people worldwide, causing disruptions in the normal functioning of their hearts. The estimation of left ventricular ejection fraction (LVEF) plays a crucial role in the diagnosis, risk stratification, treatment selection, and monitoring of heart failure. However, achieving a definitive assessment is challenging, necessitating the use of echocardiography. Electrocardiogram (ECG) is a relatively simple, quick to obtain, provides continuous monitoring of patient’s cardiac rhythm, and cost-effective procedure compared to echocardiography. In this study, we compare several regression models (support vector machine (SVM), extreme gradient boosting (XGBOOST), gaussian process regression (GPR) and decision tree) for the estimation of LVEF for three groups of HF patients at hourly intervals using 24-hour ECG recordings. Data from 303 HF patients with preserved, mid-range, or reduced LVEF were obtained from a multicentre cohort (American and Greek). ECG extracted features were used to train the different regression models in one-hour intervals. To enhance the best possible LVEF level estimations, hyperparameters tuning in nested loop approach was implemented (the outer loop divides the data into training and testing sets, while the inner loop further divides the training set into smaller sets for cross-validation). LVEF levels were best estimated using rational quadratic GPR and fine decision tree regression models with an average root mean square error (RMSE) of 3.83% and 3.42%, and correlation coefficients of 0.92 (p<0.01) and 0.91 (p<0.01), respectively. Furthermore, according to the experimental findings, the time periods of midnight-1 am, 8–9 am, and 10–11 pm demonstrated to be the lowest RMSE values between the actual and predicted LVEF levels. The findings could potentially lead to the development of an automated screening system for patients with coronary artery disease (CAD) by using the best measurement timings during their circadian cycles.
Utilizing Circadian Heart Rate Variability Features and Machine Learning for Estimating Left Ventricular Ejection Fraction Levels in Hypertensive Patients: A Composite Multiscale Entropy Analysis
Background: Early identification of left ventricular ejection fraction (LVEF) levels during the progression of hypertension is essential to prevent cardiac deterioration. However, achieving a non-invasive, cost-effective, and definitive assessment is challenging. It has prompted us to develop a comprehensive machine learning framework for the automatic quantitative estimation of LVEF levels from electrocardiography (ECG) signals. Methods: We enrolled 200 hypertensive patients from Zhongshan City, Guangdong Province, China, from 1 November 2022 to 1 January 2025. Participants underwent 24 h Holter monitoring and echocardiography for LVEF estimation. We developed a comprehensive machine learning framework that initiated with preprocessed ECG signal in one-hour intervals to extract CMSE-based heart rate variability (HRV) features, then utilized machine learning models such as linear regression (LR), Support Vector Machines (SVMs), and random forests (RFs) with recursive feature elimination for optimal LVEF estimation. Results: The LR model, notably during early night interval (20:00–21:00), achieved a RMSE of 4.61% and a MAE of 3.74%, highlighting its superiority. Compared with other similar studies, key CMSE parameters (Scales 1, 5, Slope 1–5, and Area 1–5) can effectively enhance regression models’ estimation performance. Conclusion: Our findings suggest that CMSE-derived circadian HRV features from Holter ECG could serve as a non-invasive, cost-effective, and interpretable solution for LVEF assessment in community settings. From a machine learning interpretable perspective, the proposed method emphasized CMSE’s clinical potential in capturing autonomic dynamics and cardiac function fluctuations.
Stochastic Model and Rhythm-Adaptive Technologies of Statistical Analysis and Forecasting of Economic Processes with Cyclic Components
This article presents a mathematical model of cyclical economic processes, formulated as the sum of a deterministic polynomial function and a cyclic random process that simultaneously captures trend, stochasticity, cyclicity, and rhythm variability. Building on this stochastic framework, we propose rhythm-adaptive statistical techniques for estimating the probabilistic characteristics of the cyclic component; by adjusting to rhythm changes, these techniques improve estimation accuracy. We also introduce a forecasting procedure that constructs a system of rhythm-adaptive confidence intervals for future cycles. The effectiveness of the model and associated methods is demonstrated through a series of computational experiments using Federal Reserve Economic Data. Results show that the rhythm-adaptive forecasting approach achieves mean absolute errors less than half of those produced by a comparable non-adaptive method, underscoring its practical advantage for the analysis and prediction of cyclic economic phenomena.
Plankton Concentration Model Consistent with Natural Events and Monitoring Series of Holographic Measurements
This paper considers the features of a time series of plankton concentrations, which are further compared with such phenomena as the alteration of day and night and tidal processes. The analysis of experimental data recorded as a result of long-term monitoring measurements under field conditions showed that the diurnal variability in plankton concentrations can be described using a model harmonic function. At the same time, based on the parameters of the diurnal variability model, it is possible to build a bioindication system to detect the influence of abnormal environmental factors estimated as pollution. This study discusses the ideology of building such a system based on regular observations of the behavior of autochthonous plankton using a submersible digital holographic camera.
Estimating Sink Parameters of Stochastic Functional-Structural Plant Models Using Organic Series-Continuous and Rhythmic Development
Functional-structural plant models (FSPMs) generally simulate plant development and growth at the level of individual organs (leaves, flowers, internodes, etc.). Parameters that are not directly measurable, such as the sink strength of organs, can be estimated inversely by fitting the weights of organs along an axis (organic series) with the corresponding model output. To accommodate intracanopy variability among individual plants, stochastic FSPMs have been built by introducing the randomness in plant development; this presents a challenge in comparing model output and experimental data in parameter estimation since the plant axis contains individual organs with different amounts and weights. To achieve model calibration, the interaction between plant development and growth is disentangled by first computing the occurrence probabilities of each potential site of phytomer, as defined in the developmental model (potential structure). On this basis, the mean organic series is computed analytically to fit the organ-level target data. This process is applied for plants with continuous and rhythmic development simulated with different development parameter sets. The results are verified by Monte-Carlo simulation. Calibration tests are performed both and on real plants. The analytical organic series are obtained for both continuous and rhythmic cases, and they match well with the results from Monte-Carlo simulation, and vice versa. This fitting process works well for both the simulated and real data sets; thus, the proposed method can solve the source-sink functions of stochastic plant architectures through a simplified approach to plant sampling. This work presents a generic method for estimating the sink parameters of a stochastic FSPM using statistical organ-level data, and it provides a method for sampling stems. The current work breaks a bottleneck in the application of FSPMs to real plants, creating the opportunity for broad applications.
Self-Learning Event Mistiming Detector Based on Central Pattern Generator
A repetitive movement pattern of many animals, a gait, is controlled by the Central Pattern Generator (CPG), providing rhythmic control synchronous to the sensed environment. As a rhythmic signal generator, the CPG can control the motion phase of biomimetic legged robots without feedback. The CPG can also act in sensory synchronization, where it can be utilized as a sensory phase estimator. Direct use of the CPG as the estimator is not common, and there is little research done on its utilization in the phase estimation. Generally, the sensory estimation augments the sensory feedback information, and motion irregularities can reveal from comparing measurements with the estimation. In this work, we study the CPG in the context of phase irregularity detection, where the timing of sensory events is disturbed. We propose a novel self-supervised method for learning mistiming detection, where the neural detector is trained by dynamic Hebbian-like rules during the robot walking. The proposed detector is composed of three neural components: (i) the CPG providing phase estimation, (ii) Radial Basis Function neuron anticipating the sensory event, and (iii) Leaky Integrate-and-Fire neuron detecting the sensory mistiming. The detector is integrated with the CPG-based gait controller. The mistiming detection triggers two reflexes: the elevator reflex, which avoids an obstacle, and the search reflex, which grasps a missing foothold. The proposed controller is deployed and trained on a hexapod walking robot to demonstrate the mistiming detection in real locomotion. The trained system has been examined in the controlled laboratory experiment and real field deployment in the Bull Rock cave system, where the robot utilized mistiming detection to negotiate the unstructured and slippery subterranean environment.
Molecular-Timetable Methods for Detection of Body Time and Rhythm Disorders from Single-Time-Point Genome-Wide Expression Profiles
Detection of individual body time (BT) via a single-time-point assay has been a longstanding unfulfilled dream in medicine, because BT information can be exploited to maximize potency and minimize toxicity during drug administration and thus will enable highly optimized medication. To achieve this dream, we created a \"molecular timetable\" composed of >100 \"time-indicating genes,\" whose gene expression levels can represent internal BT. Here we describe a robust method called the \"molecular-timetable method\" for BT detection from a single-time-point expression profile. The power of this method is demonstrated by the sensitive and accurate detection of BT and the sensitive diagnosis of rhythm disorders. These results demonstrate the feasibility of BT detection based on single-time-point sampling, suggest the potential for expression-based diagnosis of rhythm disorders, and may translate functional genomics into chronotherapy and personalized medicine.
Principal process analysis of biological models
Background Understanding the dynamical behaviour of biological systems is challenged by their large number of components and interactions. While efforts have been made in this direction to reduce model complexity, they often prove insufficient to grasp which and when model processes play a crucial role. Answering these questions is fundamental to unravel the functioning of living organisms. Results We design a method for dealing with model complexity, based on the analysis of dynamical models by means of Principal Process Analysis. We apply the method to a well-known model of circadian rhythms in mammals. The knowledge of the system trajectories allows us to decompose the system dynamics into processes that are active or inactive with respect to a certain threshold value. Process activities are graphically represented by Boolean and Dynamical Process Maps . We detect model processes that are always inactive , or inactive on some time interval. Eliminating these processes reduces the complex dynamics of the original model to the much simpler dynamics of the core processes, in a succession of sub-models that are easier to analyse. We quantify by means of global relative errors the extent to which the simplified models reproduce the main features of the original system dynamics and apply global sensitivity analysis to test the influence of model parameters on the errors. Conclusion The results obtained prove the robustness of the method. The analysis of the sub-model dynamics allows us to identify the source of circadian oscillations. We find that the negative feedback loop involving proteins PER, CRY, CLOCK-BMAL1 is the main oscillator, in agreement with previous modelling and experimental studies. In conclusion, Principal Process Analysis is a simple-to-use method, which constitutes an additional and useful tool for analysing the complex dynamical behaviour of biological systems.