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Rodents are reservoirs and hosts for several zoonotic diseases such as plague, leptospirosis, and leishmaniasis. Rapid development of industry and agriculture, as well as climate change throughout the globe, has led to change or increase in occurrence of rodent-borne diseases. Considering the distribution of rodents throughout Iran, the aim of this review is to assess the risk of rodent-borne diseases in Iran. We searched Google Scholar, PubMed, Science Direct, Scientific Information Database (SID), and Magiran databases up to September 2016 to obtain articles reporting occurrence of rodent-borne diseases in Iran and extract information from them. Out of 70 known rodent-borne diseases, 34 were reported in Iran: 17 (50%) parasitic diseases, 13 (38%) bacterial diseases, and 4 (12%) viral diseases. Twenty-one out of 34 diseases were reported from both humans and rodents. Among the diseases reported in the rodents of Iran, plague, leishmaniasis, and hymenolepiasis were the most frequent. The most infected rodents were Rattus norvegicus (16 diseases), Mus musculus (14 diseases), Rattus rattus (13 diseases), Meriones persicus (7 diseases), Apodemus spp. (5 diseases), Tatera indica (4 diseases), Meriones libycus (3 diseases), Rhombomys opimus (3 diseases), Cricetulus migratorius (3 diseases), and Nesokia indica (2 diseases). The results of this review indicate the importance of rodent-borne diseases in Iran. Considering notable diversity of rodents and their extensive distribution throughout the country, it is crucial to pay more attention to their role in spreading infectious diseases for better control of the diseases.

This is the most thorough treatment ever undertaken on the Sciuridae and promises to be the definitive book on squirrels for decades to come. Squirrels of the World, written by scientists with more than 100 years of collective experience studying these popular mammals, is the first comprehensive examination of all 285 species of squirrels worldwide. The authors reveal virtually every detail of the family Sciuridae, which includes ground squirrels, tree squirrels, flying squirrels, prairie dogs, and chipmunks. Each species—from the familiar gray squirrel of American backyards to the exotic and endangered woolly flying squirrel of Pakistan—is described in a detailed account that includes distinguishing characteristics, ecology, natural history, conservation status, and current threats to its existence. Squirrels of the World includes • stunning color photographs that document rare and unusual squirrels as well as common varieties • evolution, morphology, ecology, and conservation status • colorful range maps marking species distribution • images of the skull of each genus of squirrel • extensive references

Gliridae and Sciuridae, the most impressive mammalian radiations within the suborder Sciuromorpha, encompass a total of 327 extant species. This study aimed to: (i) characterize the mitogenomes of three sciurid (Spermophilus citellus, Spermophilus taurensis, and Spermophilus xanthoprymnus) and three glirid (Glis glis, Dryomys nitedula, and Dryomys laniger) species from Türkiye; (ii) elucidate the phylogeographic relationships within D. laniger and D. nitedula using both mitogenomes and mitochondrial cytochrome b (CYTB) sequences; and (iii) reconstruct the phylogenetic relationships among extant members of the suborder Sciuromorpha. Sixteen new mitogenomes were sequenced from Turkish samples, containing 37 genes (2 ribosomal RNAs, 13 protein‐coding genes, 22 transfer RNAs), exhibiting similarity to those of other Gliridae and Sciuridae species. Based on mitogenomic data, Bayesian Inference and Maximum Likelihood phylogenetic analyses revealed two major phylogroups corresponding to the two families, Gliridae and Sciuridae, which were both monophyletic. Analyses of mitogenomic and CYTB sequences revealed at least two major lineages (i: Anatolia and ii: Lesser Caucasus and Alborz) of D. nitedula in the Anatolian region of Türkiye. The mitochondrial CYTB data indicated that D. laniger exhibited at least two major lineages (Eastern and Western), whereas D. nitedula comprised multiple lineages and sublineages. The mean genetic distance between the two mitogenomic lineages of D. nitedula was 7.69%. Based on the CYTB data, the mean genetic distance between the Eastern and Western lineages of D. laniger was 7%, whereas the mean genetic distances among the lineages of D. nitedula ranged from 6% to 13%. Major lineages of both D. laniger and D. nitedula might be considered distinct species throughout the species' range. This study demonstrates that complete mitogenomes for reconstructing the Gliridae phylogeny provides important information for revealing phylogenetic and phylogeographic relationships. This study presents mitogenomic analyses of three squirrel (Sciuridae) and three dormouse (Gliridae) species from Türkiye, uncovering significant phylogenetic and phylogeographic insights within the suborder Sciuromorpha. Phylogenetic analyses positioned Gliridae as the basal group within the suborder, and mitogenomic and CYTB data revealed distinct genetic lineages for Dryomys laniger and Dryomys nitedula, suggesting potential species‐level distinctions. These findings underscore the value of complete mitogenomes in understanding the evolutionary and taxonomic relationships in Gliridae.

Individual size is a major determinant of mobile organisms’ ecology and behavior. This study aims to explore whether allometric scaling principles can provide an underlying framework for general patterns of resource patch use. To this end, we used giving-up densities (GUDs), that is, the amount of resources remaining in a patch after a forager has quit feeding, as a comparative measure of the amount of resources exploited by a forager of any given size. We specifically tested the hypothesis that size-dependent responses to both internal (energy requirement) and external (risk management) forces may have an effect on GUDs. We addressed this topic by conducting an extensive meta-analysis of published data on granivorous rodents, including 292 GUD measurements reported in 25 papers. The data set includes data on 22 granivorous rodent species belonging to three taxonomic suborders (Castorimorpha, Myomorpha, and Sciuromorpha) and spans three habitat types (desert, grassland, and forest). The observations refer to both patches subject to predation risk and safe patches. Pooling all data, we observed positive allometric scaling of GUDs with average forager size (scaling exponent = 0.45), which explained 15% of overall variance in individual GUDs. Perceived predation risk during foraging led to an increase in GUDs independently of forager size and taxonomy and of habitat type, which explained an additional 12% of overall GUD variance. The size scaling exponent of GUDs is positive across habitat types and taxonomic suborders of rodents. Some variation was observed, however. The scaling coefficients in grassland and forest habitat types were significantly higher than in the desert habitat type. In addition, Sciuromorpha and Myomorpha exhibited a more pronounced size scaling of GUDs than Castorimorpha. This suggests that different adaptive behaviors may be used in different contexts and/or from different foragers. With body size being a fundamental ecological descriptor, research into size scaling of GUDs may help to place patch-use observations in a broader allometric framework.

Background Sciuromorpha (squirrels and close relatives) are diverse in terms of body size and locomotor behavior. Individual species are specialized to perform climbing, gliding or digging behavior, the latter being the result of multiple independent evolutionary acquisitions. Each lifestyle involves characteristic loading patterns acting on the bones of sciuromorphs. Trabecular bone, as part of the bone inner structure, adapts to such loading patterns. This network of thin bony struts is subject to bone modeling, and therefore reflects habitual loading throughout lifetime. The present study investigates the effect of body size and lifestyle on trabecular structure in Sciuromorpha. Methods Based upon high-resolution computed tomography scans, the femoral head 3D inner microstructure of 69 sciuromorph species was analyzed. Species were assigned to one of the following lifestyle categories: arboreal, aerial, fossorial and semifossorial. A cubic volume of interest was selected in the center of each femoral head and analyzed by extraction of various parameters that characterize trabecular architecture (degree of anisotropy, bone volume fraction, connectivity density, trabecular thickness, trabecular separation, bone surface density and main trabecular orientation). Our analysis included evaluation of the allometric signals and lifestyle-related adaptation in the trabecular parameters. Results We show that bone surface density, bone volume fraction, and connectivity density are subject to positive allometry, and degree of anisotropy, trabecular thickness, and trabecular separation to negative allometry. The parameters connectivity density, bone surface density, trabecular thickness, and trabecular separation show functional signals which are related to locomotor behavior. Aerial species are distinguished from fossorial ones by a higher trabecular thickness, lower connectivity density and lower bone surface density. Arboreal species are distinguished from semifossorial ones by a higher trabecular separation. Conclusion This study on sciuromorph trabeculae supplements the few non-primate studies on lifestyle-related functional adaptation of trabecular bone. We show that the architecture of the femoral head trabeculae in Sciuromorpha correlates with body mass and locomotor habits. Our findings provide a new basis for experimental research focused on functional significance of bone inner microstructure.

Beavers are well-known for their ability to fell large trees through gnawing. Yet, despite this impressive behavior, little information exists on their masticatory musculature or the biomechanics of their jaw movements. It was hypothesized that beavers would have a highly efficient arrangement of the masticatory apparatus, and that gnawing efficiency would be maintained at large gape. The head of an American beaver, Castor canadensis , was dissected to reveal the masticatory musculature. Muscle origins and insertions were noted, the muscles were weighed and fiber lengths measured. Physiological cross-sectional areas were determined, and along with the muscle vectors, were used to calculate the length of the muscle moment arms, the maximum incisor bite force, and the proportion of the bite force projected along the long axis of the lower incisor, at occlusion and 30° gape. Compared to other sciuromorph rodents, the American beaver was found to have large superficial masseter and temporalis muscles, but a relatively smaller anterior deep masseter. The incisor bite force calculated for the beaver (550–740 N) was much higher than would be predicted from body mass or incisor dimensions. This is not a result of the mechanical advantage of the muscles, which is lower than most other sciuromorphs, but is likely related to the very high percentage (>96 %) of bite force directed along the lower incisor long axis. The morphology of the skull, mandible and jaw-closing muscles enable the beaver to produce a very effective and efficient bite, which has permitted beavers to become highly successful ecosystem engineers.

The grandorder Glires, consisting of the orders Rodentia and Lagomorpha, encompasses a significant portion of the extant mammalian species including Rat, Mouse, Squirrel, Guinea pig and Beaver. Glires species play an important role in the ecosystem and provide valuable animal models for genetic studies and animal testing. Thus, it is important to reliably determine their evolutionary relationships and identify molecular characteristics that are specific for different species groups within the Glires. In this work, we have constructed a phylogenetic tree for >30 genome sequenced Glires species based on concatenated sequences of 25 conserved proteins. In this tree, members of different orders, suborders, and families within Glires formed strongly supported clades, and their interrelationships were also generally reliably resolved. In parallel, we conducted comparative analyses on more than 1500 protein sequences from Glires species to identify highly conserved molecular markers. These markers were comprised of conserved signature indels (CSIs) in proteins, which are specific for different Rodentia/Glires clades. Of the 41 novel CSIs identified in this work, some are specific for the entire Glires, Rodentia, or Lagomorpha clades, whereas many others reliably demarcate different family/suborder level clades of Rodentia (viz. Myomorpha, Castorimorpha, Sciuromorpha, Hystricomorpha, and Muroidea). Additionally, some of the CSIs also provide information regarding the interrelationships among Rodentia subgroups. Our analysis has also identified one CSI that is commonly shared by the Glires and Scandentia species (tree shrew), however, its evolutionary significance is unclear. Several of the identifed rodents-specific CSIs are present in conserved disease-related proteins. Thus, they provide novel molecular markers for genetic and biochemical studies on the functions of these proteins.

Homoplasy is a strong indicator of a phenotypic trait's adaptive significance when it can be linked to a similar function. We assessed homoplasy in functionally relevant scapular and femoral traits of Marmotini and Xerini, two sciuromorph rodent clades that independently acquired a fossorial lifestyle from an arboreal ancestor. We studied 125 species in the scapular dataset and 123 species in the femoral dataset. Pairwise evolutionary model comparison was used to evaluate whether homoplasy of trait optima is more likely than other plausible scenarios. The most likely trend of trait evolution among all traits was assessed via likelihood scoring of all considered models. The homoplasy hypothesis could never be confirmed as the single most likely model. Regarding likelihood scoring, scapular traits most frequently did not differ among Marmotini, Xerini, and arboreal species. For the majority of femoral traits, results indicate that Marmotini, but not Xerini, evolved away from the ancestral arboreal condition. We conclude on the basis of the scapular results that the forelimbs of fossorial and arboreal sciuromorphs share mostly similar functional demands, whereas the results on the femur indicate that the hind limb morphology is less constrained, perhaps depending on the specific fossorial habitat. This study is concerned with the scapular and femoral trait evolution in sciuromorph rodents with an emphasis on trait homoplasy between two fossorial lineages, Marmotini and Xerini. Evolutionary model comparison does not suggest homoplasy to be a likely scenario. Instead, it appears that the scapula is more conserved, reflecting the ancestral arboreal condition, whereas the femoral morphology shifted away from this condition in Marmotini, but not in Xerini.

The Meade Basin, SW Kansas, yields a rich vertebrate fossil record from the late Cenozoic. Here, we review fossil ground squirrels (Sciuridae) from the region as a contribution to the broader Meade Basin Rodent Project. We recognize 14 species in seven genera: two species of giant ground squirrels (PaenemarmotaHibbard and Schultz, 1948) from the early Pliocene, and at least 12 species in six extant genera (AmmospermophilusMerriam, 1892; OtospermophilusBrandt, 1844; IctidomysAllen, 1877; PoliocitellusHowell, 1938; UrocitellusObolenskij, 1927; CynomysRafinesque, 1817) from the Pliocene—Pleistocene sequence, including the first regional records of Ammospermophilus. Based on dental morphology and the ecology of modern congeners, we interpret faunal change through the sequence as primarily reflecting a shift from a Pliocene assemblage of “southwestern” taxa with granivorous/omnivorous diets (relatively low-crowned, transversely narrow cheek teeth) in warm and at least occasionally dry shrub or shrub-steppe habitats (Ammospermophilus, Otospermophilus, Ictidomys meadensis [Hibbard, 1941a]), to a Pleistocene temperate assemblage of grazing taxa that either exhibited relatively high-crowned, transversely wider cheek teeth (Urocitellus, Cynomys, Ictidomys tridecemlineatus [Mitchill, 1821]) or were otherwise dependent on grassland habitats (Poliocitellus). The early Pleistocene Borchers assemblage was transitional in this regard, heralding a “revolution” observed as well with other clades in the Meade Basin rodent community. This interpretation is broadly congruent with evidence of Pliocene climatic change and the staged development of regional grasslands, with the modern proportion of C3/C4 plants established in the Meade Basin during the early Pleistocene.

Dozens of well-preserved fossil burrow systems in upper Miocene sedimentary rocks of the Ogallala Group at a site in east-central Nebraska record rodent behavior and the subsurface ecology of grasslands just as the modern Great Plains was developing. These burrow systems include one to four entrance or exit tunnels, large underground nesting chambers at depths of several decimeters below ancient land surfaces, and incisor grooves on the walls. Tunnels average 89.8 mm in diameter, a value similar to the burrow diameters of multiple living North American rodents. Chambers vary in shape and typically exceed 500 mm in length; some attain 1000 mm in length. Living marmotine ground squirrels (tribe Marmotini) construct burrow systems of varying degrees of complexity, but they do not engage in shallow subsurface foraging. Extinct members of this group were the most likely excavators of the fossil burrows. In contrast, extant pocket gophers (family Geomyidae) and, presumably their fossil relatives, are obligate subterranean animals that produce linked deep and shallow burrow subsystems, the latter representing their chief foraging strategy. Our results raise issues regarding the relationships between the architecture of fossil rodent burrow systems and aspects of rodent behavior and life history, such as litter size, developmental rates, seasonal torpor, hibernation, and sociality in grasslands. An improved understanding of the burrowing behaviors of ancient rodents will highly complement the growing body of knowledge about the development of grasslands on Earth over time, but truly ichnological analyses of the burrows and burrowing behaviors of extant rodents are much needed.