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102,243 result(s) for "Software packages"
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Infrared images of the transiting disk in the epsilon Aurigae system
The tilted-disk model predicts a central hole that should be observed as a mid-eclipse brightening8. [...] photometric and spectroscopic measurements should be made as frequently as possible to create a longitudinal profile of the disk.
Examining the Optimal Choice of SEM Statistical Software Packages for Sustainable Mathematics Education: A Systematic Review
Intending to analyze structural relationships between measured variables and latent constructs, researchers tend to adopt structural equation modeling (SEM) through either “covariance-based SEM” (CB-SEM) or “variance-based SEM” (VB-SEM)/“partial least squares SEM” (PLS-SEM) by using numerous statistical applications. Nevertheless, the reviews on understanding the optimal choice of proprietary statistical software packages in SEM approaches are scarce despite its immense importance in sustaining education. Therefore, a systematic review would be obligated to scrutinize the empirical studies to fill this gap. By employing the Preferred Reporting Items for Systematic Review and Meta-Analyses (PRISMA) guidelines, a total of 47 publications that met the inclusion criteria were obtained. To extract articles from August 2018 to 2022, Scopus, Web of Science (WoS), and The Education Resources Information Center (ERIC) databases were adopted. The findings imply that six types of proprietary statistical software packages emerged as an optimal choice: Lisrel, Amos, Mplus, SmartPLS, R package (plspm), and WarpPLS. Despite the widespread usage of a variety of statistical applications, SmartPLS and AMOS were rigorously utilized in VB-SEM/PLS-SEM and CB-SEM, respectively. This review is important for practitioners to discover which statistical tools are relevant to use and to identify gaps in order to sustain mathematics education for the future.
Bridging the language gap: an empirical study of bindings for open source machine learning libraries across software package ecosystems
Open source machine learning (ML) libraries enable developers to integrate advanced ML functionality into their own applications. However, popular ML libraries, such as TensorFlow, are not available natively in all programming languages and software package ecosystems. Hence, developers who wish to use an ML library which is not available in their programming language or ecosystem of choice, may need to resort to using a so-called binding library (or binding ). Bindings provide support across programming languages and package ecosystems for reusing a host library. For example, the Keras .NET binding provides support for the Keras library in the NuGet (.NET) ecosystem even though the Keras library was written in Python. In this paper, we collect 2,436 cross-ecosystem bindings for 546 ML libraries across 13 software package ecosystems by using an approach called BindFind , which can automatically identify bindings and link them to their host libraries. Furthermore, we conduct an in-depth study of 133 cross-ecosystem bindings and their development for 40 popular open source ML libraries. Our findings reveal that the majority of ML library bindings are maintained by the community, with npm being the most popular ecosystem for these bindings. Our study also indicates that most bindings cover only a limited range of the host library’s releases, often experience considerable delays in supporting new releases, and have widespread technical lag. Our findings highlight key factors to consider for developers integrating bindings for ML libraries and open avenues for researchers to further investigate bindings in software package ecosystems.
Validation of the mean radiant temperature simulated by the RayMan software in urban environments
The RayMan software is worldwide applied in investigations on different issues in human-biometeorology. However, only the simulated mean radiant temperature ( T mrt ) has been validated so far in a few case studies. They are based on T mrt values, which were experimentally determined in urban environments by use of a globe thermometer or applying the six-directional method. This study analyses previous T mrt validations in a comparative manner. Their results are extended by a recent validation of T mrt in an urban micro-environment in Freiburg (southwest Germany), which can be regarded as relatively heterogeneous due to different shading intensities by tree crowns. In addition, a validation of the physiologically equivalent temperature (PET) simulated by RayMan is conducted for the first time. The validations are based on experimentally determined T mrt and PET values, which were calculated from measured meteorological variables in the daytime of a clear-sky summer day. In total, the validation results show that RayMan is capable of simulating T mrt satisfactorily under relatively homogeneous site conditions. However, the inaccuracy of simulated T mrt is increasing with lower sun elevation and growing heterogeneity of the simulation site. As T mrt represents the meteorological variable that mostly governs PET in the daytime of clear-sky summer days, the accuracy of simulated T mrt is mainly responsible for the accuracy of simulated PET. The T mrt validations result in some recommendations, which concern an update of physical principles applied in the RayMan software to simulate the short- and long-wave radiant flux densities, especially from vertical building walls and tree crowns.
Advances in Gaussian random field generation: a review
Gaussian (normal) distribution is a basic continuous probability distribution in statistics, it plays a substantial role in scientific and engineering problems that related to stochastic phenomena. This paper aims to review state-of-the-art of Gaussian random field generation methods, their applications in scientific and engineering issues of interest, and open-source software/packages for Gaussian random field generation. To this end, first, we briefly introduce basic mathematical concepts and theories in the Gaussian random field, then seven commonly used Gaussian random field generation methods are systematically presented. The basic idea, mathematical framework of each generation method are introduced in detail and comparisons of these methods are summarized. Then, representative applications of the Gaussian random field in various areas, especially of engineering interest in recent two decades, are reviewed. For readers’ convenience, four representative example codes are provided, and several relevant up-to-date open-source software and packages that freely available from the Internet are introduced.
The CoLiS platform for the analysis of maintainer scripts in Debian software packages
The software packages of the Debian distribution include more than twenty-seven thousand maintainer scripts in total, almost all of them being written in the Posix shell language. These scripts are executed with root privileges at installation, update, and removal of a package, which makes them critical for system maintenance. While the Debian policy provides guidance for package maintainers producing the scripts, only few tools exist to check the compliance of a script to that policy. We present CoLiS , a software platform for discovering violations of non-trivial properties required by the Debian policy in maintainer scripts. We describe our methodology which is based on symbolic execution and feature tree constraints, and we give an overview of the toolchain. We obtain promising results: our toolchain is effective in analysing a large set of Debian maintainer scripts, and it has already detected over 150 policy violations that have led to bug reports, more than two-third of them now being fixed.
Comparing cardiovascular magnetic resonance strain software packages by their abilities to discriminate outcomes in patients with heart failure with preserved ejection fraction
Background Cardiovascular magnetic resonance (CMR) myocardial strain analysis using feature tracking (FT) is an increasingly popular method to assess cardiac function. However, different software packages produce different strain values from the same images and there is little guidance regarding which software package would be the best to use. We explored a framework under which different software packages could be compared and used based on their abilities to differentiate disease from health and differentiate disease severity based on outcome. Method To illustrate this concept, we compared 4-chamber left ventricular (LV) peak longitudinal strain (GLS) analyzed from retrospective electrocardiogram gated cine imaging performed on 1.5 T CMR scanners using three CMR post-processing software packages in their abilities to discriminate a group of 45 patients with heart failure with preserved ejection fraction (HFpEF) from 26 controls without cardiovascular disease and to discriminate disease severity based on outcomes. The three different post-processing software used were SuiteHeart, cvi42, and DRA-Trufistrain. Results All three software packages were able to distinguish HFpEF patients from controls. 4-chamber peak GLS by SuiteHeart was shown to be a better discriminator of adverse outcomes in HFpEF patients than 4-chamber GLS derived from cvi42 or DRA-Trufistrain. Conclusion We illustrated a framework to compare feature tracking GLS derived from different post-processing software packages. Publicly available imaging data sets with outcomes would be important to validate the growing number of CMR-FT software packages.
DG-Mapping: a novel software package for the analysis of any type of reentry and focal activation of simulated, experimental or clinical data of cardiac arrhythmia
In this work, we present the release of a novel easy to use software package called DGM or Directed-Graph-Mapping. DGM can automatically analyze any type of arrhythmia to find reentry or focal sources if the measurements are synchronized in time. Currently, DGM requires the local activation times (LAT) and the spatial coordinates of the measured electrodes. However, there is no requirement for any spatial organization of the electrodes, allowing to analyze clinical, experimental or computational data. DGM creates directed networks of the activation, which are analyzed with fast algorithms to search for reentry (cycles in the network) and focal sources (nodes with outgoing arrows). DGM has been mainly optimized to analyze atrial tachycardia, but we also discuss other applications of DGM demonstrating its wide applicability. The goal is to release a free software package which can allow researchers to save time in the analysis of cardiac data. An academic license is attached to the software, allowing only non-commercial use of the software. All updates of the software, user and installation guide will be published on a dedicated website www.dgmapping.com . Graphical Abstract Direct-Graph-Mapping is a method to automatically analyze a given arrhythmia by converting measured data of the electrodes in a directed network. DGM requires the local activation times (LAT) and the spatial coordinates of the measured electrodes. There is no requirement for any spatial organization of the electrodes, allowing to analyze clinical, experimental or computational data (see left). An example could be the LATs and coordinates from a CARTO file. DGM creates a directed network of the activation by (1) determining the neighbors of each node, 2 (2) allowing a directed arrow between two neighbors if propagation of the electrical wave is possible, (3) repeating this process for all nodes, (4) if necessary, redistributing the nodes more uniformly and repeating step (1)-(3). Two possible steps are (5) to visualize the wavefront by creating an average graph or (6) find the cycles in the network which represent the reentry loops. Focal sources are nodes with only outgoing arrows.
Comparing multiple statistical software for multiple-indicator, multiple-cause modeling: an application of gender disparity in adult cognitive functioning using MIDUS II dataset
Background The multiple-indicator, multiple-cause model (MIMIC) incorporates covariates of interest in the factor analysis. It is a special case of structural equation modeling (SEM), which is modeled under latent variable framework. The MIMIC model provides rigorous results and becomes broadly available in multiple statistical software. The current study introduces the MIMIC model and how it can be implemented using statistical software packages SAS CALIS procedure, R lavaan package, and M plus version 8.0. Methods In this paper, we first discussed the formulation of the MIMIC model with regard to model specification and identification. We then demonstrated the empirical application of the MIMIC model with the Midlife in the United States II (MIDUS II) Study ( N  = 4109) using SAS CALIS procedure, R lavaan package and M plus version 8.0 to examine gender disparities in cognitive functioning. The input, output, and diagram syntaxes of the three statistical software packages were also presented. Results In terms of data structure, all three statistical programs can be conducted using both raw data and empirical covariance matrix. SAS and R are comprehensive statistical analytic packages and encompass numerous data manipulation capacities. M plus is designed primarily for latent variable modeling and has far more modeling flexibility compared to SAS and R, but limited in data manipulation. Differences in model results from the three statistical programs are trivial. Overall, the results show that while men show better performance in executive function than women, women demonstrate better episodic memory than men. Conclusions Our study demonstrates the utility of the MIMIC model in its empirical application, fitted with three popular statistical software packages. Results from our models align with empirical findings from previous research. We provide coding procedures and examples with detailed explanations in the hopes of providing a concise tutorial for researchers and methodologists interested in incorporating latent constructs with multiple indicators and multiple covariates in their research projects. Future researchers are encouraged to adopt this flexible and rigorous modeling approach.
FAD Technique and Differentiation of a Composite Function
Different approaches to the calculation of the gradient of a composite function of several variables are compared, namely, exact analytically derived formulas, formulas based on the fast automatic differentiation (FAD) technique, and standard software packages implementing the ideas of the FAD technique. The approaches are compared as applied to a composite function representing the energy of a system of atoms with the Tersoff interatomic potential. The comparison criterion is the computer time required for computing the gradient of the function. The results show that the FAD technique is superior to the analytical formulas. The standard packages take nearly the same time to compute the function gradient as the FAD technique formulas.