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39,118 result(s) for "Spectral analysis"
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De-biasing the dynamic mode decomposition for applied Koopman spectral analysis of noisy datasets
The dynamic mode decomposition (DMD)—a popular method for performing data-driven Koopman spectral analysis—has gained increased popularity for extracting dynamically meaningful spatiotemporal descriptions of fluid flows from snapshot measurements. Often times, DMD descriptions can be used for predictive purposes as well, which enables informed decision-making based on DMD model forecasts. Despite its widespread use and utility, DMD can fail to yield accurate dynamical descriptions when the measured snapshot data are imprecise due to, e.g., sensor noise. Here, we express DMD as a two-stage algorithm in order to isolate a source of systematic error. We show that DMD’s first stage, a subspace projection step, systematically introduces bias errors by processing snapshots asymmetrically. To remove this systematic error, we propose utilizing an augmented snapshot matrix in a subspace projection step, as in problems of total least-squares, in order to account for the error present in all snapshots. The resulting unbiased and noise-aware total DMD (TDMD) formulation reduces to standard DMD in the absence of snapshot errors, while the two-stage perspective generalizes the de-biasing framework to other related methods as well. TDMD’s performance is demonstrated in numerical and experimental fluids examples. In particular, in the analysis of time-resolved particle image velocimetry data for a separated flow, TDMD outperforms standard DMD by providing dynamical interpretations that are consistent with alternative analysis techniques. Further, TDMD extracts modes that reveal detailed spatial structures missed by standard DMD.
LSWAVE: a MATLAB software for the least-squares wavelet and cross-wavelet analyses
The least-squares wavelet analysis (LSWA) is a robust method of analyzing any type of time/data series without the need for editing and preprocessing of the original series. The LSWA can rigorously analyze any non-stationary and equally/unequally spaced series with an associated covariance matrix that may have trends and/or datum shifts. The least-squares cross-wavelet analysis complements the LSWA in the study of the coherency and phase differences of two series of any type. A MATLAB software package including a graphical user interface is developed for these methods to aid researchers in analyzing pairs of series. The package also includes the least-squares spectral analysis, the antileakage least-squares spectral analysis, and the least-squares cross-spectral analysis to further help researchers study the components of interest in a series. We demonstrate the steps that users need to take for a successful analysis using three examples: two synthetic time series, and a Global Positioning System time series.
State-space multitaper time-frequency analysis
Time series are an important data class that includes recordings ranging from radio emissions, seismic activity, global positioning data, and stock prices to EEG measurements, vital signs, and voice recordings. Rapid growth in sensor and recording technologies is increasing the production of time series data and the importance of rapid, accurate analyses. Time series data are commonly analyzed using time-varying spectral methods to characterize their nonstationary and often oscillatory structure. Current methods provide local estimates of data features. However, they do not offer a statistical inference framework that applies to the entire time series. The important advances that we report are state-space multitaper (SS-MT) methods, which provide a statistical inference framework for time-varying spectral analysis of nonstationary time series. We model nonstationary time series as a sequence of second-order stationary Gaussian processes defined on nonoverlapping intervals. We use a frequency-domain random-walk model to relate the spectral representations of the Gaussian processes across intervals. The SS-MT algorithm efficiently computes spectral updates using parallel 1D complex Kalman filters. An expectation–maximization algorithm computes static and dynamic model parameter estimates. We test the framework in time-varying spectral analyses of simulated time series and EEG recordings from patients receiving general anesthesia. Relative to standard multitaper (MT), SS-MT gave enhanced spectral resolution and noise reduction (>10 dB) and allowed statistical comparisons of spectral properties among arbitrary time series segments. SS-MT also extracts time-domain estimates of signal components. The SS-MT paradigm is a broadly applicable, empirical Bayes’ framework for statistical inference that can help ensure accurate, reproducible findings from nonstationary time series analyses.
How Well Do Multisatellite Products Capture the Space–Time Dynamics of Precipitation? Part I
As more global satellite-derived precipitation products become available, it is imperative to evaluate them more carefully for providing guidance as to how well precipitation space–time features are captured for use in hydrologic modeling, climate studies, and other applications. Here we propose a space–time Fourier spectral analysis and define a suite of metrics that evaluate the spatial organization of storm systems, the propagation speed and direction of precipitation features, and the space–time scales at which a satellite product reproduces the variability of a reference “ground-truth” product (“effective resolution”). Wedemonstrate how the methodology relates to our physical intuition using the case study of a storm system with rich space–time structure. We then evaluate five high-resolution multisatellite products (CMORPH, GSMaP, IMERG-Early, IMERG-Final, and PERSIANN-CCS) over a period of 2 years over the southeastern United States. All five satellite products show generally consistent space–time power spectral density when compared to a reference ground gauge–radar dataset (GV-MRMS), revealing agreement in terms of average morphology and dynamics of precipitation systems. However, a deficit of spectral power at wavelengths shorter than 200 km and periods shorter than 4 h reveals that all satellite products are excessively “smooth.” The products also show low levels of spectral coherence with the gauge–radar reference at these fine scales, revealing discrepancies in capturing the location and timing of precipitation features. From the space–time spectral coherence, the IMERG-Final product shows superior ability in resolving the space– time dynamics of precipitation down to 200-km and 4-h scales compared to the other products.
Leaf Spectral Analysis for Detection and Differentiation of Three Major Rice Diseases in the Philippines
Monitoring the plant’s health and early detection of disease are essential to facilitate effective management, decrease disease spread, and minimize yield loss. Spectroscopic techniques in remote sensing offer less laborious methods and high spatiotemporal scale to monitor diseases in crops. Spectral measurements during the development of disease infection may reveal differences among diseases and determine the stage it can be effectively detected. In this study, spectral analysis was performed over the visible and near-infrared (400–850 nm) portions of the spectrum to detect and differentiate three major rice diseases in the Philippines, namely tungro, BLB, and blast disease. Reflectance of infected rice leaves was recorded repeatedly from inoculation to the late stage of each disease. Results show that spectral reflectance is characteristically affected by each disease, resulting in different spectral, signature sensitivity, and first-order derivatives. Red and red-edge wavelength ranges are the most sensitive to the three diseases. Near-infrared wavelengths decreased as tungro and blast diseases progressed. In addition, the spectral reflectance was resampled to common reflectance sensitivity bands of optical sensors and used in the cluster analysis. It showed that BLB and blast can be detected in the early disease stage on the IRRI Standard Evaluation System (SES) scale of 1 and 3, respectively. Alternatively, tungro was detected in its later stage, with an 11–30% height reduction and no distinct yellow to yellow-orange discoloration (5 SES scale). Three regression techniques, Partial Least Square, Random Forest, and Support Vector Regression were performed separately on each disease to develop models predicting its severity. The validation results of the PLSR and SVR models in tungro and blast show accuracy levels that are promising to be used in estimating the severity of the disease in leaves while RFR shows the best results for BLB. Early disease detection and regression models from spectral measurements and analysis for disease severity estimation can help in disease monitoring and proper disease management implementation.
Mortality risk assessment using deep learning-based frequency analysis of electroencephalography and electrooculography in sleep
Abstract Study Objectives To assess whether the frequency content of electroencephalography (EEG) and electrooculography (EOG) during nocturnal polysomnography (PSG) can predict all-cause mortality. Methods Power spectra from PSGs of 8716 participants, including from the MrOS Sleep Study and the Sleep Heart Health Study, were analyzed in deep learning-based survival models. The best-performing model was further examined using SHapley Additive Explanation (SHAP) for data-driven sleep-stage specific definitions of power bands, which were evaluated in predicting mortality using Cox Proportional Hazards models. Results Survival analyses, adjusted for known covariates, identified multiple EEG frequency bands across all sleep stages predicting all-cause mortality. For EEG, we found an all-cause mortality hazard ratio (HR) of 0.90 (CI: 95% 0.85 to 0.96) for 12–15 Hz in N2, 0.86 (CI: 95% 0.82 to 0.91) for 0.75–1.5 Hz in N3, and 0.87 (CI: 95% 0.83 to 0.92) for 14.75–33.5 Hz in rapid-eye-movement sleep. For EOG, we found several low-frequency effects including an all-cause mortality HR of 1.19 (CI: 95% 1.11 to 1.28) for 0.25 Hz in N3, 1.11 (CI: 95% 1.03 to 1.21) for 0.75 Hz in N1, and 1.11 (CI: 95% 1.03 to 1.20) for 1.25–1.75 Hz in wake. The gain in the concordance index (C-index) for all-cause mortality is minimal, with only a 0.24% increase: The best single mortality predictor was EEG N3 (0–0.5 Hz) with a C-index of 77.78% compared to 77.54% for confounders alone. Conclusions Spectral power features, possibly reflecting abnormal sleep microstructure, are associated with mortality risk. These findings add to a growing literature suggesting that sleep contains incipient predictors of health and mortality. Graphical Abstract Graphical Abstract
Underwater Hyperspectral Imaging (UHI): A Review of Systems and Applications for Proximal Seafloor Ecosystem Studies
Marine ecosystem monitoring requires observations of its attributes at different spatial and temporal scales that traditional sampling methods (e.g., RGB imaging, sediment cores) struggle to efficiently provide. Proximal optical sensing methods can fill this observational gap by providing observations of, and tracking changes in, the functional features of marine ecosystems non-invasively. Underwater hyperspectral imaging (UHI) employed in proximity to the seafloor has shown a further potential to monitor pigmentation in benthic and sympagic phototrophic organisms at small spatial scales (mm–cm) and for the identification of minerals and taxa through their finely resolved spectral signatures. Despite the increasing number of studies applying UHI, a review of its applications, capabilities, and challenges for seafloor ecosystem research is overdue. In this review, we first detail how the limited band availability inherent to standard underwater cameras has led to a data analysis “bottleneck” in seafloor ecosystem research, in part due to the widespread implementation of underwater imaging platforms (e.g., remotely operated vehicles, time-lapse stations, towed cameras) that can acquire large image datasets. We discuss how hyperspectral technology brings unique opportunities to address the known limitations of RGB cameras for surveying marine environments. The review concludes by comparing how different studies harness the capacities of hyperspectral imaging, the types of methods required to validate observations, and the current challenges for accurate and replicable UHI research.
CCTV‐Hyperspectral Imaging for Suspended Sediment Transport (HISST): Proof‐of‐Concept for a Continuous Day‐and‐Night Monitoring Approach
Effective sediment monitoring is crucial for managing dynamic river environments where suspended sediment transport varies over time. However, manual sampling and turbidity sensor‐based methods provide limited spatial coverage and can be labor‐intensive. Remote sensing offers non‐contact spatial measurements but generally has low temporal resolution. To overcome these challenges, we propose closed‐circuit television‐hyperspectral imaging for suspended sediment transport (CCTV‐HISST). This framework consists of a hyperspectral CCTV system integrated with a machine learning framework and enables continuous, high‐frequency monitoring of suspended sediment concentration (SSC) during the daytime, at sunset, and overnight. Combining hyperspectral imaging with low‐light adaptability, the system can detect subtle spectral variations in sediments under natural and artificial lighting. We conducted 15 experiments using three sediment types (high‐visibility silt, low‐visibility sand, and their mixture) under controlled shallow‐water conditions in an outdoor flume. Experiments were categorized by light source: sunlight for daytime, combined sunlight and halogen lighting at sunset, and halogen lighting at night. This proof‐of‐concept study suggests that the proposed machine learning framework, light classification and adaptive regression, achieved 99% accuracy in light classification and strong agreement with field SSC measurements, even in untrained cases. Validation using field spectrometry and laser diffraction sensor data further confirmed the reliability of the proposed system. This study highlights the potential of CCTV‐HISST as a scalable, noncontact alternative for real‐time monitoring by adaptively detecting suspended sediments and quantifying their concentration across a range of light conditions. Future studies can extend its applicability to natural rivers by addressing limitations related to water depth and SSC variability.
Comparison of coseismic velocity changes estimated by cross-correlation of ambient seismic noise for earthquakes in south Korea and Japan
Ambient noise cross-correlation has been widely used to observe post-earthquake temporal velocity variations. Comparative studies are essential for assessing seismic hazards and clarifying the relationship between velocity variation and magnitude. However, very few comparative studies by earthquake magnitude have been conducted, particularly for magnitudes smaller than 6. In 2016 and 2017, southeastern Korea experienced the two most damaging earthquakes of the past 250 years: the Pohang earthquake ( M 5.4) and Gyeongju earthquake ( M 5.8). This study compared the coseismic velocity variations of these earthquakes with those observed in the M 7.3 Kumamoto and M 6.6 Tottori earthquakes, which occurred in Japan in 2016. In this study, the moving window cross-spectral analysis revealed different curves for bidirectional cross-correlations, a difference that has not been addressed in previous studies. This discrepancy was most likely caused by data deficiencies due to prolonged aftershocks or by instability from small-magnitude earthquakes recorded by surface seismometers in Korea. The average velocity decrease between forward and reverse order pairs correlated well with earthquake magnitude, except in the case of the Korean earthquake. Our devised measure based on aftershock activity suggests that the large decrease in the Pohang earthquake was due to non-coseismic noise in addition to instability.
Discrimination of the Cognitive Function of Community Subjects Using the Arterial Pulse Spectrum and Machine-Learning Analysis
Early identification of cognitive impairment would allow affected patients to receive care at earlier stage. Changes in the arterial stiffness have been identified as a prominent pathological feature of dementia. This study aimed to verify if applying machine-learning analysis to spectral indices of the arterial pulse waveform can be used to discriminate different cognitive conditions of community subjects. 3-min Radial arterial blood pressure waveform (BPW) signals were measured noninvasively in 123 subjects. Eight machine-learning algorithms were used to evaluate the following 4 pulse indices for 10 harmonics (total 40 BPW spectral indices): amplitude proportion and its coefficient of variation; phase angle and its standard deviation. Significant differences were noted in the spectral pulse indices between Alzheimer’s-disease patients and control subjects. Using them as training data (AUC = 70.32% by threefold cross-validation), a significant correlation (R2 = 0.36) was found between the prediction probability of the test data (comprising community subjects at two sites) and the Mini-Mental-State-Examination score. This finding illustrates possible physiological connection between arterial pulse transmission and cognitive function. The present findings from pulse-wave and machine-learning analyses may be useful for discriminating cognitive condition, and hence in the development of a user-friendly, noninvasive, and rapid method for the early screening of dementia.