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• Warming-induced desiccation of the fertile topsoil layer could lead to decreased nutrient diffusion, mobility, mineralization and uptake by roots. Increased vertical decoupling between nutrients in topsoil and water availability in subsoil/bedrock layers under warming could thereby reduce cumulative nutrient uptake over the growing season. • We used a Mediterranean semiarid shrubland as model system to assess the impacts of warming-induced topsoil desiccation on plant water- and nutrient-use patterns. A 6 yr manipulative field experiment examined the effects of warming (2.5°C), rainfall reduction (30%) and their combination on soil resource utilization by Helianthemum squamatum shrubs. • A drier fertile topsoil (‘growth pool’) under warming led to greater proportional utilization of water from deeper, wetter, but less fertile subsoil/bedrock layers (‘maintenance pool’) by plants. This was linked to decreased cumulative nutrient uptake, increased nonstomatal (nutritional) limitation of photosynthesis and reduced water-use efficiency, above-ground biomass growth and drought survival. • Whereas a shift to greater utilization of water stored in deep subsoil/bedrock may buffer the negative impact of warming-induced topsoil desiccation on transpiration, this plastic response cannot compensate for the associated reduction in cumulative nutrient uptake and carbon assimilation, which may compromise the capacity of plants to adjust to a warmer and drier climate.

Soil organic carbon (SOC) changes under future climate warming are difficult to quantify in situ. Here we apply an innovative approach combining space-for-time substitution with meta-analysis to SOC measurements in 113,013 soil profiles across the globe to estimate the effect of future climate warming on steady-state SOC stocks. We find that SOC stock will reduce by 6.0 ± 1.6% (mean±95% confidence interval), 4.8 ± 2.3% and 1.3 ± 4.0% at 0–0.3, 0.3–1 and 1–2 m soil depths, respectively, under 1 °C air warming, with additional 4.2%, 2.2% and 1.4% losses per every additional 1 °C warming, respectively. The largest proportional SOC losses occur in boreal forests. Existing SOC level is the predominant determinant of the spatial variability of SOC changes with higher percentage losses in SOC-rich soils. Our work demonstrates that warming induces more proportional SOC losses in topsoil than in subsoil, particularly from high-latitudinal SOC-rich systems. The response of soil organic carbon to climate warming may be soil depth-dependent, but remains unquantified in situ. Here the authors show that warming induces more proportional soil carbon losses in topsoil than in subsoil, particularly from high-latitudinal carbon-rich soils.

Soil organic carbon (SOC) persistence is predominantly governed by mineral protection, consequently, soil mineral-associated (MAOC) and particulate organic carbon (POC) turnovers have different impacts on the vulnerability of SOC to climate change. Here, we generate the global MAOC and POC maps using 8341 observations and then infer the turnover times of MAOC and POC by a data-model integration approach. Global MAOC and POC storages are 975 964 987 Pg C (mean with 5% and 95% quantiles) and 330 323 337 Pg C, while global mean MAOC and POC turnover times are 129 45 383 yr and 23 5 82 yr in the top meter, respectively. Climate warming-induced acceleration of MAOC and POC decomposition is greater in subsoil than that in topsoil. Overall, the global atlas of MAOC and POC turnover, together with the global distributions of MAOC and POC stocks, provide a benchmark for Earth system models to diagnose SOC-climate change feedback. Separating soil organic carbon into mineral-associated and particulate organic carbon enables a more accurate prediction of soil vulnerability to climate change. The authors generate the global atlas of stocks and turnover times of these two fractions.

Background Even with extensive root growth, plants may fail to access subsoil water and nutrients when root-restricting soil layers are present. Biopores, created from decaying roots or soil fauna, reduce penetration resistance and channel root growth into the deeper soil. Further positive effects on plants result from biopore traits, as the pore walls are enriched in nutrients, microbial abundance, and activity relative to bulk soil. However, negative effects on plant growth have also been observed due to root clumping in biopores, less root-soil contact than in the surrounding bulk soil and leaching of nutrients. Scope We discuss methods for biopore research, properties of biopores and their impact plant performance based on a literature review and own data. We elucidate potential implications of altered root-soil contact for plant growth and the consequences of root growth in pores for the rhizosphere microbiome. Conclusions Biopores play an important but ambiguous role in soils. The effects of biopores on plant growth depend on soil properties such as compaction and moisture in an as-yet-unresolved manner. However, pore properties and root-soil contact are key parameters affecting plant yield. Knowledge gaps exist on signaling pathways controlling root growth in pores and on mechanisms modifying rhizosphere properties inside biopores. The degree to which negative effects of biopores on plant growth are compensated in the bulk soil is also unclear. Answering these questions requires interdisciplinary research efforts and novel imaging methods to improve our dynamic understanding of root growth and rhizosphere processes within biopores and at the rhizosphere-biopore interface.

Soil organic carbon (SOC) in shrublands is an important component of global carbon cycling. However, there is a dearth of large-scale systematic observations of SOC stocks at different soil depths, and it remains uncertain whether and how the relative importance of biotic and abiotic variables in regulating SOC stocks changes with soil depth. Here, we quantified large-scale patterns and controlling factors of SOC storage per area (SOCD, kg m−2) for both topsoils (0–30 cm) and subsoils (30–100 cm) by taking full advantage of a consistent stratified random sampling study of one-meter soil profiles across 1211 sites in Chinese shrublands. We found that subsoils stored about 53.30% of total SOCD, falling into the range of previously reported values for terrestrial ecosystems. SoilGrids250m model-derived assessments overestimated SOCD by 13.72 and 65.49% for topsoils and subsoils, respectively. The effects of climate means and seasonality on SOCD were equally strong in both topsoils and subsoils. The predominant effects of edaphic properties on SOCD were more robust in subsoils than in topsoils. Belowground biomass of shrublands was the only significant predictor of topsoil SOCD, but it did not predict subsoil SOCD accurately. These findings have refined our understanding of the pivotal role of shrublands in SOC storage and sequestration potential and could serve as an ecologically valuable baseline for large-scale improvement and validation of depth-dependent SOC dynamics for multilayer SOC modules in Earth Systems Models.

Background and aims To assess the impacts of soil microbes and plant genotype on the composition of maize associated bacterial communities. Methods Two genotypes of Brazilian maize were planted indoors on sterile sand, a deep underground subsoil, and a nutrient-rich topsoil from the Amazon jungle (terra preta). DNA was extracted from rhizospheres, phyllospheres, and surface sterilized roots for 16S rDNA fingerprinting and next generation sequencing. Results Neither plant genotype nor soil type appeared to influence bacterial diversity in phyllospheres or endospheres. Rhizospheres showed strikingly similar 16S rDNA ordination of both fingerprinting and sequencing data, with soil type driving grouping patterns and genotype having a significant impact only on sterile sand. Rhizospheres grown in non-sterile soils contained greater bacterial diversity than sterile-sand grown ones, however the dominant OTUs (species of Proteobacteria and Bacteroidetes) were found in all rhizospheres suggesting seeds as a common source of inoculum. Rhizospheres of the commercial hybrid appeared to contain less bacterial diversity than the landrace. Conclusions Maize rhizospheres receive diverse bacteria from soil, are influenced by the genotype or treatment of the seed, and are dominated by species of Proteobacteria, Actinobacteria, Bacteroidetes, and Firmicutes. As many dominant 16S rDNA sequences were observed in rhizospheres grown in both sterile and non-sterile substrate, we conclude that the most common bacterial cells in juvenile maize rhizospheres are seed transmitted.

Dissolved organic carbon (DOC) from Oa horizons has been proposed to be an important contributor for subsoil organic carbon stocks. We investigated the fate of DOC by directly injecting a DOC solution from ¹³C labelled litter into three soil depths at beech forest sites. Fate of injected DOC was quantified with deep drilling soil cores down to 2 m depth, 3 and 17 months after the injection. 27 ± 26% of the injected DOC was retained after 3 months and 17 ± 22% after 17 months. Retained DOC was to 70% found in the first 10 cm below the injection depth and on average higher in the topsoil than in the subsoil. After 17 months DOC in the topsoil was largely lost (– 19%) while DOC in the subsoil did not change much (– 4.4%). Data indicated a high stabilisation of injected DOC in the subsoils with no differences between the sites. Potential mineralisation as revealed by incubation experiments however, was not different between DOC injected in topsoil or subsoils underlining the importance of environmental factors in the subsoil for DOC stabilisation compared to topsoil. We conclude that stability of DOC in subsoil is primary driven by its spatial inaccessibility for microorganisms after matrix flow while site specific properties did not significantly affect stabilisation. Instead, a more fine-textured site promotes the vertical transport of DOC due to a higher abundance of preferential flow paths.

AimsTree species mixing is an essential measure used to increase soil carbon (C) sinks and enhance nutrient cycling, while enzyme catalysis is the rate-limiting step of soil C mineralization and nutrient release. The study aimed to determine how mixing affects soil C and nitrogen (N) hydrolases kinetics in subtropical plantations.MethodsThe topsoil (0–15 cm) and subsoil (45–60 cm) from two monoculture coniferous plantations and two mixed plantations formed by replanting broad-leaved trees in the two coniferous plantations were collected to analyze the maximum activity (Vmax), half-saturation constant (Km) and catalytic efficiency (Vmax/Km) of four hydrolases involved in C (β-glucosidase, BG; cellobioside, CB) and N (β-N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP) cycling.ResultsMixing decreased the Vmax of BG but increased the Vmax of NAG in the topsoil, indicating the differential response of C and N enzyme activities to mixing. The Km of NAG and LAP increased, while the Vmax/Km of CB and NAG decreased after mixing in the topsoil. Mixing decreased the Vmax of CB and NAG and the Vmax/Km of BG and CB in the subsoil. The Vmax/Km values of C and N hydrolases were negatively correlated with SOC, total N and mineral N and positively correlated with the aromatic/aliphatic compound ratio, which illustrated that the hydrolases kinetics were mediated by changes in soil quality.ConclusionMixing decreased the catalytic efficiency of soil C and N hydrolases in subtropical plantations, although the mixing effect on soil hydrolase kinetic parameters depended on the enzyme type and soil depth.

Aims Grain yields of summer maize are significantly affected by different nitrogen (N) rates and depths through regulating root growth and distribution in soil. Understanding of effects of the deep placement of N on the root and shoot growth, grain yield and N use efficiency in summer maize are limited. Methods In this study, four N rates: 225, 191.25, 157.5 and 0 kg ha −1 applied at four depths: 5, 10, 15, and 20 cm were studied. Soil N content, root dry weight, root length density, biomass, grain yield and N use efficiency of maize were measured. Results Compared to 225 kg N ha −1 applied at a depth of 5 cm, a 15% reduction in the N application rate at a depth of 15 cm induced a larger root length density in the subsoil, as well as a larger rooting depth. It also facilitated maintaining a higher level of biomass and N accumulation during the later growth period, which increased the N assimilation of grain and enhanced grain yield by 3.9%, N recovery efficiency by 66.7%, N agronomic efficiency by 38.5%, and partial factor productivity of N by 22.1%. Conclusions Overall, this study demonstrates that reducing the recommended N application rate of 225 kg ha −1 by 15% but applying it at a depth of 15 cm might be considered an efficient fertilization method that increases agricultural productivity and N use efficiency.