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"System Level Functions"
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Engineering Systems Integration
2012,2016
The first book to address the underlying premises of systems integration and how to exposit them into a practical and productive manner, this book prepares systems managers and systems engineers to consider their decisions in light of systems integration metrics. The book addresses two questions: Is there a way to express the interplay of human actions and the result of system interactions of a product with its environment, and are there methods that combine to improve the integration of systems? The systems integration theory and integration frameworks proposed in the book tie General Systems Theory with practice.
An Estimation of Precipitation Retention Time Using Depth Metres in the Northern Basin of Lake Biwa
by
Maho Iwaki
,
Naoshige Goto
,
Kazuhide Hayakawa
in
frequency response function
,
frequency response function; lake level response; paddy–waterway systems; precipitation retention time; terrestrial water storage
,
lake level response
2022
Journal Article
Half a century of rising extinction risk of coral reef sharks and rays
2023
Sharks and rays are key functional components of coral reef ecosystems, yet many populations of a few species exhibit signs of depletion and local extinctions. The question is whether these declines forewarn of a global extinction crisis. We use IUCN Red List to quantify the status, trajectory, and threats to all coral reef sharks and rays worldwide. Here, we show that nearly two-thirds (59%) of the 134 coral-reef associated shark and ray species are threatened with extinction. Alongside marine mammals, sharks and rays are among the most threatened groups found on coral reefs. Overfishing is the main cause of elevated extinction risk, compounded by climate change and habitat degradation. Risk is greatest for species that are larger-bodied (less resilient and higher trophic level), widely distributed across several national jurisdictions (subject to a patchwork of management), and in nations with greater fishing pressure and weaker governance. Population declines have occurred over more than half a century, with greatest declines prior to 2005. Immediate action through local protections, combined with broad-scale fisheries management and Marine Protected Areas, is required to avoid extinctions and the loss of critical ecosystem function condemning reefs to a loss of shark and ray biodiversity and ecosystem services, limiting livelihoods and food security.
Sharks and rays are vital coral reef species. This study shows that nearly two thirds (59%) of the 134 coral-reef associated species are threatened with extinction. The main cause of their decline is found to be overfishing, both targeted and unintentional, and extinction risk is greater for larger species found in nations with higher fishing pressure and weaker governance.
Journal Article
Cumulative stressors reduce the self-regulating capacity of coastal ecosystems
2021
Marine ecosystems are prone to tipping points, particularly in coastal zones where dramatic changes are associated with interactions between cumulative stressors (e.g., shellfish harvesting, eutrophication and sediment inputs) and ecosystem functions. A common feature of many degraded estuaries is elevated turbidity that reduces incident light to the seafloor, resulting from multiple factors including changes in sediment loading, sea-level rise and increased water column algal biomass. To determine whether cumulative effects of elevated turbidity may result in marked changes in the interactions between ecosystem components driving nutrient processing, we conducted a large-scale experiment manipulating sediment nitrogen concentrations in 15 estuaries across a national-scale gradient in incident light at the seafloor. We identified a threshold in incident light that was related to distinct changes in the ecosystem interaction networks (EIN) that drive nutrient processing. Above this threshold, network connectivity was high with clear mechanistic links to denitrification and the role of large shellfish in nitrogen processing. The EIN analyses revealed interacting stressors resulting in a decoupling of ecosystem processes in turbid estuaries with a lower capacity to denitrify and process nitrogen. This suggests that, as turbidity increases with sediment load, coastal areas can be more vulnerable to eutrophication. The identified interactions between light, nutrient processing and the abundance of large shellfish emphasizes the importance of actions that seek to manage multiple stressors and conserve or enhance shellfish abundance, rather than actions focusing on limiting a single stressor.
Journal Article
Structure, function and regulation of the hsp90 machinery
by
Buchner, Johannes
,
Li, Jing
in
85747 Garching Germany Login to access the Email id Crossref citations 19 PMC citations 11 DOI: 10.4103/2319-4170.113230 PMID: 23806880 Get Permissions Abstract Heat shock protein 90 (Hsp90) is an ATP-dependent molecular chaperone which is essential in eukaryotes. It is required for the activation and stabilization of a wide variety of client proteins and many of them are involved in important cellular pathways. Since Hsp90 affects numerous physiological processes such as signal transduction
,
a middle domain (M-domain)
,
a new model of the chaperone cycle emerges [Figure 3]A
2013
Heat shock protein 90 (Hsp90) is an ATP-dependent molecular chaperone which is essential in eukaryotes. It is required for the activation and stabilization of a wide variety of client proteins and many of them are involved in important cellular pathways. Since Hsp90 affects numerous physiological processes such as signal transduction, intracellular transport, and protein degradation, it became an interesting target for cancer therapy. Structurally, Hsp90 is a flexible dimeric protein composed of three different domains which adopt structurally distinct conformations. ATP binding triggers directionality in these conformational changes and leads to a more compact state. To achieve its function, Hsp90 works together with a large group of cofactors, termed co-chaperones. Co-chaperones form defined binary or ternary complexes with Hsp90, which facilitate the maturation of client proteins. In addition, posttranslational modifications of Hsp90, such as phosphorylation and acetylation, provide another level of regulation. They influence the conformational cycle, co-chaperone interaction, and inter-domain communications. In this review, we discuss the recent progress made in understanding the Hsp90 machinery.
Journal Article
Representing the function and sensitivity of coastal interfaces in Earth system models
by
Butman, David
,
Windham-Myers, Lisamarie
,
Rowland, Joel
in
631/158/2445
,
704/47
,
abiotic, aquatic, atmospheric, bacteria, biogeochemistry, biology, blue carbon, carbon, carbon cycling, circulation model, climate change, Coastal Biogeochemistry, coastal ecosystems, coastal model, continuum, cycling, dissolved, dissolved organic carbon, dissolved oxygen, disturbance, earth system model, ecosystem, eelgrass, emission, erosion, estuarine, estuary, exchange, export, feedback, extreme event, flood, flux, geology, genomic, global change, gradients, greenhouse gas, groundwater, hurricane, hydrogeology, hydrogeomorphic, Hydrologic Connectivity, hydrologic model, hydrology, inorganic, interface, inundation, marine, marsh, metabolism, microbial, microbes, mixing, model, ocean acidification, organic matter, organic carbon, organic, optical, outgassing, particulate, oxygen, Photosynthesis, pore-water, reactive transport, remote sensing, river, satellite, sea-level rise, seagrass, sea level rise, seawater, sediment, soil, sequestration, soil carbon, stock, stress, storm, terres
2020
Between the land and ocean, diverse coastal ecosystems transform, store, and transport material. Across these interfaces, the dynamic exchange of energy and matter is driven by hydrological and hydrodynamic processes such as river and groundwater discharge, tides, waves, and storms. These dynamics regulate ecosystem functions and Earth’s climate, yet global models lack representation of coastal processes and related feedbacks, impeding their predictions of coastal and global responses to change. Here, we assess existing coastal monitoring networks and regional models, existing challenges in these efforts, and recommend a path towards development of global models that more robustly reflect the coastal interface.
Coastal systems are hotspots of ecological, geochemical and economic activity, yet their dynamics are not accurately represented in global models. In this Review, Ward and colleagues assess the current state of coastal science and recommend approaches for including the coastal interface in predictive models.
Journal Article
Multistability and Transient Response of the Greenland Ice Sheet to Anthropogenic CO2 Emissions
by
Calov, Reinhard
,
Ganopolski, Andrey
,
Höning, Dennis
in
Anomalies
,
anthropogenic carbon emissions
,
Anthropogenic factors
2023
Understanding the future fate of the Greenland Ice Sheet (GIS) in the context of anthropogenic CO2 emissions is crucial to predict sea level rise. With the fully coupled Earth system model of intermediate complexity CLIMBER‐X, we study the stability of the GIS and its transient response to CO2 emissions over the next 10 Kyr. Bifurcation points exist at global temperature anomalies of 0.6 and 1.6 K relative to pre‐industrial. For system states in the vicinity of the equilibrium ice volumes corresponding to these temperature anomalies, mass loss rate and sensitivity of mass loss to cumulative CO2 emission peak. These critical ice volumes are crossed for cumulative emissions of 1,000 and 2,500 GtC, which would cause long‐term sea level rise by 1.8 and 6.9 m respectively. In summary, we find tipping of the GIS within the range of the temperature limits of the Paris agreement. Plain Language Summary With ongoing carbon dioxide emissions from the burning of fossil fuels, the atmosphere heats up, which has dramatic consequences for the ice sheets on Earth. In this study, we focus on the Greenland ice sheet (GIS), which holds so much ice that a complete melting would cause the global sea level to rise by 7 m. However, future mass loss of the GIS is challenging to predict because it is a non‐linear function of temperature and occurs over long timescales. For this reason, we use CLIMBER‐X, which is a coupled model of the whole Earth system. We find that the GIS features two critical volume thresholds, whose crossing would imply extensive further mass loss so that it would be difficult for the ice to grow back, even in thousands of years. Near these critical ice volumes, the mass loss rates are particularly high, and differences in the total carbon dioxide emission have a large impact. In summary, if cumulative emissions larger than 1,000 Gt carbon are released into the atmosphere, the GIS will shrink below a critical threshold and mass loss will inevitably continue until a substantial part of the ice sheet has melted. Key Points Bifurcation points exist at global mean temperature anomalies of 0.6 and 1.6 K relative to pre‐industrial Mass loss rate and sensitivity to cumulative CO2 emission peak near the equilibrium ice volumes belonging to these temperature anomalies Substantial long‐term mass loss of the Greenland ice sheet for cumulative emissions larger than 1,000 Gt carbon
Journal Article
Stability and Control of Large-Scale Dynamical Systems
2011,2012
Modern complex large-scale dynamical systems exist in virtually every aspect of science and engineering, and are associated with a wide variety of physical, technological, environmental, and social phenomena, including aerospace, power, communications, and network systems, to name just a few. This book develops a general stability analysis and control design framework for nonlinear large-scale interconnected dynamical systems, and presents the most complete treatment on vector Lyapunov function methods, vector dissipativity theory, and decentralized control architectures. Large-scale dynamical systems are strongly interconnected and consist of interacting subsystems exchanging matter, energy, or information with the environment. The sheer size, or dimensionality, of these systems necessitates decentralized analysis and control system synthesis methods for their analysis and design. Written in a theorem-proof format with examples to illustrate new concepts, this book addresses continuous-time, discrete-time, and hybrid large-scale systems. It develops finite-time stability and finite-time decentralized stabilization, thermodynamic modeling, maximum entropy control, and energy-based decentralized control. This book will interest applied mathematicians, dynamical systems theorists, control theorists, and engineers, and anyone seeking a fundamental and comprehensive understanding of large-scale interconnected dynamical systems and control.
Surface impacts of the Quasi Biennial Oscillation
by
Gray, Lesley J.
,
Anstey, James A.
,
Lu, Hua
in
Anomalies
,
Atmospheric circulation
,
Atmospheric forcing
2018
Teleconnections between the Quasi Biennial Oscillation (QBO) and the Northern Hemisphere zonally averaged zonal winds, mean sea level pressure (mslp) and tropical precipitation are explored. The standard approach that defines the QBO using the equatorial zonal winds at a single pressure level is compared with the empirical orthogonal function approach that characterizes the vertical profile of the equatorial winds. Results are interpreted in terms of three potential routes of influence, referred to as the tropical, subtropical and polar routes. A novel technique is introduced to separate responses via the polar route that are associated with the stratospheric polar vortex, from the other two routes. A previously reported mslp response in January, with a pattern that resembles the positive phase of the North Atlantic Oscillation under QBO westerly conditions, is confirmed and found to be primarily associated with a QBO modulation of the stratospheric polar vortex. This mid-winter response is relatively insensitive to the exact height of the maximum QBO westerlies and a maximum positive response occurs with westerlies over a relatively deep range between 10 and 70 hPa. Two additional mslp responses are reported, in early winter (December) and late winter (February/March). In contrast to the January response the early and late winter responses show maximum sensitivity to the QBO winds at ∼ 20 and ∼ 70 hPa respectively, but are relatively insensitive to the QBO winds in between (∼ 50 hPa). The late winter response is centred over the North Pacific and is associated with QBO influence from the lowermost stratosphere at tropical/subtropical latitudes in the Pacific sector. The early winter response consists of anomalies over both the North Pacific and Europe, but the mechanism for this response is unclear. Increased precipitation occurs over the tropical western Pacific under westerly QBO conditions, particularly during boreal summer, with maximum sensitivity to the QBO winds at 70 hPa. The band of precipitation across the Pacific associated with the Inter-tropical Convergence Zone (ITCZ) shifts southward under QBO westerly conditions. The empirical orthogonal function (EOF)-based analysis suggests that this ITCZ precipitation response may be particularly sensitive to the vertical wind shear in the vicinity of 70 hPa and hence the tropical tropopause temperatures.
Journal Article
Magnetism and charge density wave order in kagome FeGe
by
Hashimoto, Makoto
,
Rotenberg, Eli
,
Birgeneau, Robert J
in
Band structure of solids
,
Banded structure
,
Charge density waves
2023
Electron correlations often lead to emergent orders in quantum materials, and one example is the kagome lattice materials where topological states exist in the presence of strong correlations between electrons. This arises from the features of the electronic band structure that are associated with the kagome lattice geometry: flat bands induced by destructive interference of the electronic wavefunctions, topological Dirac crossings and a pair of van Hove singularities. Various correlated electronic phases have been discovered in kagome lattice materials, including magnetism, charge density waves, nematicity and superconductivity. Recently, a charge density wave was discovered in the magnetic kagome FeGe, providing a platform for understanding the interplay between charge order and magnetism in kagome materials. Here we observe all three electronic signatures of the kagome lattice in FeGe using angle-resolved photoemission spectroscopy. The presence of van Hove singularities near the Fermi level is driven by the underlying magnetic exchange splitting. Furthermore, we show spectral evidence for the charge density wave as gaps near the Fermi level. Our observations point to the magnetic interaction-driven band modification resulting in the formation of the charge density wave and indicate an intertwined connection between the emergent magnetism and charge order in this moderately correlated kagome metal.The observation of band structure features typical of the kagome lattice in FeGe suggests that an interplay of magnetism and electronic correlations determines the physics of this material.
Journal Article