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Heat shock protein 90 (Hsp90) is an ATP-dependent molecular chaperone which is essential in eukaryotes. It is required for the activation and stabilization of a wide variety of client proteins and many of them are involved in important cellular pathways. Since Hsp90 affects numerous physiological processes such as signal transduction, intracellular transport, and protein degradation, it became an interesting target for cancer therapy. Structurally, Hsp90 is a flexible dimeric protein composed of three different domains which adopt structurally distinct conformations. ATP binding triggers directionality in these conformational changes and leads to a more compact state. To achieve its function, Hsp90 works together with a large group of cofactors, termed co-chaperones. Co-chaperones form defined binary or ternary complexes with Hsp90, which facilitate the maturation of client proteins. In addition, posttranslational modifications of Hsp90, such as phosphorylation and acetylation, provide another level of regulation. They influence the conformational cycle, co-chaperone interaction, and inter-domain communications. In this review, we discuss the recent progress made in understanding the Hsp90 machinery.

Crops carrying broad-spectrum resistance loci provide an effective strategy for controlling infectious disease because these loci typically confer resistance to diverse races of a pathogen or even multiple species of pathogens. Despite their importance, only a few crop broad-spectrum resistance loci have been reported. Here, we report the identification and characterization of the rice bsr-k1 (broad-spectrum resistance Kitaake-1) mutant, which confers broad-spectrum resistance against Magnaporthe oryzae and Xanthomonas oryzae pv oryzae with no major penalty on key agronomic traits. Map-based cloning reveals that Bsr-k1 encodes a tetratricopeptide repeats (TPRs)-containing protein, which binds to mRNAs of multiple OsPAL (OsPAL1–7) genes and promotes their turnover. Loss of function of the Bsr-k1 gene leads to accumulation of OsPAL1–7 mRNAs in the bsr-k1 mutant. Furthermore, overexpression of OsPAL1 in wild-type rice TP309 confers resistance to M. oryzae, supporting the role of OsPAL1. Our discovery of the bsr-k1 allele constitutes a significant conceptual advancement and provides a valuable tool for breeding broad-spectrum resistant rice.

Penta-, Tetra-, and Octo-tricopeptide repeat (PPR, TPR, and OPR) proteins are nucleus-encoded proteins composed of tandem repeats of 35, 34, and 38–40 amino acids, respectively. They form helix-turn-helix structures that interact with mRNA or other proteins and participate in RNA stabilization, processing, maturation, and act as translation enhancers of chloroplast and mitochondrial mRNAs. These helical repeat proteins are unevenly present in plants and algae. While PPR proteins are more abundant in plants than in algae, OPR proteins are more abundant in algae. In Arabidopsis , maize, and rice there have been 450, 661, and 477 PPR proteins identified, respectively, which contrasts with only 14 PPR proteins identified in Chlamydomonas reinhardtii . Likewise, more than 120 OPR proteins members have been predicted from the nuclear genome of C. reinhardtii and only one has been identified in Arabidopsis thaliana . Due to their abundance in land plants, PPR proteins have been largely characterized making it possible to elucidate their RNA-binding code. This has even allowed researchers to generate engineered PPR proteins with defined affinity to a particular target, which has served as the basis to develop tools for gene expression in biotechnological applications. However, fine elucidation of the helical repeat proteins code in Chlamydomonas is a pending task. In this review, we summarize the current knowledge on the role PPR, TPR, and OPR proteins play in chloroplast gene expression in the green algae C. reinhardtii , pointing to relevant similarities and differences with their counterparts in plants. We also recapitulate on how these proteins have been engineered and shown to serve as mRNA regulatory factors for biotechnological applications in plants and how this could be used as a starting point for applications in algae.

Background Long non-coding RNAs (lncRNAs) have been demonstrated to play vital roles in cancer development and progression. However, their biological roles and function mechanisms in liver cancer remain largely unknown. Methods RNA-seq was performed with clinical hepatoma tissues and paired adjacent normal liver tissues to identify differentially expressed lncRNAs. qPCR was utilized to examine the expression levels of lncRNAs. We studied the function of TLNC1 in cell growth and metastasis of hepatoma with both cell and mouse models. RNA-seq, RNA pull-down coupled with mass spectrometry, RNA immunoprecipitation, dual luciferase reporter assay, and surface plasmon resonance analysis were used to analyze the functional mechanism of TLNC1. Results Based on the intersection of our own RNA-seq, TCGA RNA-seq, and TCGA survival analysis data, TLNC1 was identified as a potential tumorigenic lncRNA of liver cancer. TLNC1 significantly enhanced the growth and metastasis of hepatoma cells both in vitro and in vivo. TLNC1 exerted its tumorigenic function through interaction with TPR and inducing the TPR-mediated transportation of p53 from nucleus to cytoplasm, thus repressing the transcription of p53 target genes and finally contributing to the progression of liver cancer. Conclusions TLNC1 is a promising prognostic factor of liver cancer, and the TLNC1-TPR-p53 axis can serve as a potential therapeutic target for hepatoma treatment.

The catalytic partial oxidation of methane (POM) is aimed at the mitigation of CH4 (a highly potent greenhouse gas) from the environment and the synthesis of syngas with a high H2/CO ratio. Herein, to enhance the POM reaction, Ni‐supported phosphate‐modified‐zirconia were synthesized with promotor “Ce” to achieve high H2/CO ratio (2.4–3.2). The catalysts were characterized by surface area and porosity, X‐ray diffraction, RAMAN, temperature‐programmed experiments (TPR, CO2‐TPD, and TPO), and TEM. Increasing the ceria addition over 10Ni/PO4 + ZrO2 resulted in lower crystallinity, higher dispersion of active sites, and enhanced the surface area of catalyst. The unique and prominent reducibility and basicity of NiO‐species and surface oxide ions, respectively, are particularly notable at 4 wt.% ceria loading. At a reaction temperature of 600°C, the highest concentration of active sites and a unique concentration of moderate strength basic sites can be achieved with 4 wt.% ceria loading over 10Ni/PO4 + ZrO2. This leads to 44% conversion of CH4, 36% yield of H2, 35% yield of CO2, and H2/CO ratio of 3.16 for the POM reaction. The cyclic H2TPR‐O2TPO‐H2TPR experiment confirms the reorganization of the active site towards high temperature under oxidizing gas O2 and reducing gas H2 gas stream during the POM reaction. PO4 + ZrO2 is found excellent support for stabilizing Ni (active sites) derived from NiO and Ni2P2P7. Upon promotional addition of 4 wt% ceria over Ni/PO4 + ZrO2, the concentration of moderate strength basic sites and reducible species have grown which induce the highest activity majorly through an indirect pathway of partial oxidation of methane.

Zn- and Mn-doped Cerium-oxide based catalyst textured as a solid solutional as well as interfacial form was compared in CO 2 hydrogenation reaction to understand the role of texture as well as dopant type. Ce 0.9 M 0.1 O 2 (M = Zn, Mn) solid solution was prepared by hydrothermal method and CeO 2 supported 10 mol% metal oxide (Metal = Zn, Mn) were prepared by wet impregnation method, where the catalysts were characterized by XRD, N 2 adsorption/desorption isotherm, TEM, Raman spectra, HAADF-STEM and H 2 -TPR. During the CO 2 activation reaction, CO was the major product with minor amounts of methane, ethane, methanol and ethanol. In the case of the Zn-doped CeO 2 catalyst, the presence of Zn improved catalytic activity in both solid solutional and interfacial form due to the synergetic effect of Zn-Ce-based oxide. However, for MnOx/CeO 2 catalysts, the CO 2 consumption rate significantly decreased for 10 mol% MnOx/CeO 2 , Ce 0.9 Mn 0.1 O 2 and Mn 3 O 4 , where the MnO x addition inhibits the reduction of CeO 2 . In the case of the pure CeO 2 , DRIFTS spectra show that formate intermediate formed by reaction between activated CO 2 and OH transformed into methoxy species through formaldehyde intermediates, which leads to the formation of small amount of methanol and ethanol. Graphic Abstract

Vapor phase catalytic transfer hydrogenation (CTH) of aqueous levulinic acid (LA) with formic acid as hydrogen source over different copper catalysts is reported. The Cu–SiO 2 showed the highest LA conversion (56%) and selectivity to γ-valerolactone (GVL, 87%) at 250 °C. Analysis indicates that the presence of acid sites are responsible for the cleavage of C–O bonds forming angelicalactone intermediate followed by its hydrogenation to GVL over copper species. Even though the acid sites are necessary a quantitative correlation between acid sites and LA conversion was not observed. Characterization indicated that the higher conversion over Cu–SiO 2 can be related to metal support interaction as evident from higher reduction temperature of copper species in H 2 -TPR compared to other catalysts. Graphical Abstract

The recurrent repeats having conserved stretches of amino acids exists across all domains of life. Subsequent repetition of single sequence motif and the number and length of the minimal repeating motifs are essential characteristics innate to these proteins. The proteins with tandem peptide repeats are essential for providing surface to mediate protein-protein interactions for fundamental biological functions. Plants are enriched in tandem repeat containing proteins typically distributed into various families. This has been assumed that the occurrence of multigene repeats families in plants enable them to cope up with adverse environmental conditions and allow them to rapidly acclimatize to these conditions. The evolution, structure, and function of repeat proteins have been studied in all kingdoms of life. The presence of repeat proteins is particularly profuse in multicellular organisms in comparison to prokaryotes. The precipitous expansion of repeat proteins in plants is presumed to be through internal tandem duplications. Several repeat protein gene families have been identified in plants. Such as Armadillo (ARM), Ankyrin (ANK), HEAT, Kelch-like repeats, Tetratricopeptide (TPR), Leucine rich repeats (LRR), WD40, and Pentatricopeptide repeats (PPR). The structure and functions of these repeat proteins have been extensively studied in plants suggesting a critical role of these repeating peptides in plant cell physiology, stress and development. In this review, we illustrate the structural, functional, and evolutionary prospects of prolific repeat proteins in plants.

Different low-cost cobalt precursors (acetate, chloride) and thermal treatments (air calcination/H2 reduction versus direct H2-activation) were investigated to alter the interaction between cobalt and silica. H2-activated catalysts prepared from cobalt chloride had large Co0 particles (XRD, chemisorption) formed by weak interactions between cobalt chloride and silica (temperature programmed reduction (TPR), TPR with mass spectrometry (TPR-MS), TPR with extended X-ray absorption fine structure (EXAFS) and X-ray absorption near edge spectroscopy (XANES) techniques) and retained Cl-blocked active sites, resulting in poor activity. In contrast, unpromoted Co/SiO2 catalysts derived from cobalt acetate had strong interactions between Co species and silica (TPR/TPR-MS, TPR-EXAFS/XANES); adding Pt increased the extent of the Co reduction. For these Pt-promoted catalysts, the reduction of uncalcined catalysts was faster, resulting in larger Co0 clusters (19.5 nm) in comparison with the air-calcined/H2-activated catalyst (7.8 nm). Both catalysts had CO conversions 25% higher than that of the Pt-promoted catalyst prepared in the traditional manner (air calcination/H2 reduction using cobalt nitrate) and three times higher than that of the traditional unpromoted Co/silica catalyst. The retention of residual cobalt carbide (observed in XANES) from cobalt acetate decomposition impacted performance, resulting in a higher C1–C4 selectivity (32.2% for air-calcined and 38.7% for uncalcined) than that of traditional catalysts (17.5–18.6%). The residual carbide also lowered the α-value and olefin/paraffin ratio. Future work will focus on improving selectivity through oxidation–reduction cycles.