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result(s) for
"Taccaceae"
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Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots
by
Iles, William J. D.
,
Lam, Vivienne K. Y.
,
Sass, Chodon
in
aquatic origin
,
Aquatic plants
,
Araceae
2018
Premise of the Study We present the first plastome phylogeny encompassing all 77 monocot families, estimate branch support, and infer monocot‐wide divergence times and rates of species diversification. Methods We conducted maximum likelihood analyses of phylogeny and BAMM studies of diversification rates based on 77 plastid genes across 545 monocots and 22 outgroups. We quantified how branch support and ascertainment vary with gene number, branch length, and branch depth. Key Results Phylogenomic analyses shift the placement of 16 families in relation to earlier studies based on four plastid genes, add seven families, date the divergence between monocots and eudicots+Ceratophyllum at 136 Mya, successfully place all mycoheterotrophic taxa examined, and support recognizing Taccaceae and Thismiaceae as separate families and Arecales and Dasypogonales as separate orders. Only 45% of interfamilial divergences occurred after the Cretaceous. Net species diversification underwent four large‐scale accelerations in PACMAD‐BOP Poaceae, Asparagales sister to Doryanthaceae, Orchidoideae‐Epidendroideae, and Araceae sister to Lemnoideae, each associated with specific ecological/morphological shifts. Branch ascertainment and support across monocots increase with gene number and branch length, and decrease with relative branch depth. Analysis of entire plastomes in Zingiberales quantifies the importance of non‐coding regions in identifying and supporting short, deep branches. Conclusions We provide the first resolved, well‐supported monocot phylogeny and timeline spanning all families, and quantify the significant contribution of plastome‐scale data to resolving short, deep branches. We outline a new functional model for the evolution of monocots and their diagnostic morphological traits from submersed aquatic ancestors, supported by convergent evolution of many of these traits in aquatic Hydatellaceae (Nymphaeales).
Journal Article
A few-gene plastid phylogenetic framework for mycoheterotrophic monocots
by
Merckx, Vincent S.F.T.
,
Lam, Vivienne K.Y.
,
Graham, Sean W.
in
achlorophyllous plants
,
Asparagales
,
Burmanniaceae
2016
PREMISE OF THE STUDY: Few-gene studies with broad taxon sampling have provided major insights into phylogeny and underpin plant classification. However, they have typically excluded heterotrophic plants because of loss, pseudogenization, or rapid evolution of plastid genes. Here we performed a phylogenetic survey of three commonly retained plastid genes to assess their utility in placing mycoheterotrophs. METHODS: We surveyed accD, clpP, and motK for 34 taxa from seven monocot families that include full mycoheterotrophs and a broad sampling of photosynthetic taxa. After screening for weak contaminants, we conducted phylogenetic analyses and characterized among-lineage rate variation. KEY RESULTS: Likelihood analyses strongly supported local placements of fully mycoheterotrophic taxa for Corsiaceae, Iridaceae, Orchidaceae, and Petrosaviaceae, in positions consistent with other studies. Depression of likelihood bootstrap support values near mycoheterotrophic clades was alleviated when each mycoheterotrophic family was considered separately. Triuridaceae (Sciaphilo) monophyly was recovered in a partitioned likelihood analysis, and the family then placed as sister to Cyclanthaceae-Pandanaceae. Burmanniaceae placed in Dioscoreales with weak to strong support depending on analysis details, and we inferred a plastid-based phylogeny for the family. Thismiaceae species may retain a plastid genome, based on accD retention. The inferred position of Thismiaceae is unstable, but was close to Taccaceae (Dioscoreales) in some analyses. CONCLUSIONS: Long branches/elevated substitution rates, missing genes, and occasional contaminants are challenges for plastid-based phylogenetic inference with full mycoheterotrophs. However, most mycoheterotrophs can be readily integrated into the broad picture of plant phylogeny using several plastid genes and broad taxonomic sampling.
Journal Article
Tacca khanhhoaensis V.S. Dang & Vuong (Taccaceae), a new species from southern Vietnam
2018
Taccakhanhhoaensis V.S. Dang & Vuong (Taccaceae) is described as a new species from Hon Ba Nature Reserve in southern Vietnam. This species is morphologically similar to T.chantrieri and T.ampliplacenta but differs from its allies by several salient characters: size of leaves and petioles, inflorescent much shorter leaves, number of flowers, stigma lobes, buds colour. A description, conservation assessment, together with photographs and a key to the species of Tacca in Vietnam are presented.
Journal Article
Genetic Diversity and Geographic Differentiation in Tacca chantrieri (Taccaceae): an Autonomous Selfing Plant with Showy Floral Display
2006
BACKGROUND: and Aims Despite considerable investment in elaborate floral displays, Tacca chantrieri populations are predominantly selfing. It is hypothesized that this species might possess considerable spatial or temporal variation in outcrossing rates among populations. To test this hypothesis, genetic variability and genetic differentiation within and among T. chantrieri populations were investigated to find out if they are in agreement with expectations based on a predominantly inbred mating system. METHODS: Genetic diversity was quantified using inter-simple sequence repeats (ISSR) in 303 individuals from 13 populations taken from known locations of T. chantrieri in China, and from one population in Thailand. Key Results Of the 113 primers screened, 24 produced highly reproducible ISSR bands. Using these primers, 160 discernible DNA fragments were generated, of which 145 (90·62 %) were polymorphic. This indicated considerable genetic variation at the species level. However, there were relatively low levels of polymorphism at population levels, with percentages of polymorphic bands (PPB) ranging from 8·75 % to 55 %. A high level of genetic differentiation among populations was detected based on different measures (Nei's genetic diversity analysis: GST = 0·5835; AMOVA analysis: FST = 0·6989). Furthermore, based on levels of genetic differentiation, the 14 populations clustered into two distinct groups separated by the Tanaka Line. CONCLUSIONS: High levels of differentiation among populations and low levels of diversity within populations at large spatial scales are consistent with earlier small-scale studies of mating patterns detected by allozymes which showed that T. chantrieri populations are predominantly selfing. However, it appears that T. chantrieri has a mixed-mating system in which self-fertilization predominates, but there is occasional outcrossing. Significant genetic differences between the two distinct regions might be attributed to vicariance along the Tanaka Line. Finally, possible mechanisms of geographic patterns based on genetic differentiation of T. chantrieri are discussed.
Journal Article
Tacca ampliplacenta (Taccaceae), a New Species from Yunnan, China
2008
Tacca ampliplacenta L. Zhang &. Q.-J. Li sp. nova (Taccaceae) is described and illustrated from Yunnan province, China. It is distinguished by the following characters: the petioles, peduncles, and flowers are red wine coloured instead of dark purple; the bracts are very similar to T. chantrieri, but the fruits have different intumescent placentas, which fill the fruit cavity; and the stalk of the infructescence is rich in flexible fibre and very tough. Its flowering period (July–August) is rather late as compared with that of the sympatric T. chantrieri (April–June). This phenological difference may play an important role in reproductive isolation between the two species.
Journal Article
Notas sobre la familia Taccaceae (Liliidae) y su presencia en Colombia
by
Fernández Alonso José Luis
,
Liesner Ronald L.
,
Prieto C. Adriana
in
corología
,
distribución
,
ecología
2000
The Taccaceae (Liliidae) are known in Colombia only from an old and obscure collection of Tacca parkeri Seem. Two new localities from the department of Guainía are here reported. This variable species is widely distributed in the Guayana region and the Amazonian lowlands. Some comments about morphological variability, flowering time and distribution of this species are also included.Se documenta la presencia de la familia Taccaceae (Liliidae) en Colombia, conocida solo por un impreciso registro de Tacca parkeri Seem., con la adición de dos nuevas localidades provenientes del departamento del Guainía. La especie, muy variable, se encuentra ampliamente distribuida en la región Guayana y en zonas bajas de la cuenca amazónica. Se adiciona información sobre variabilidad morfológica, período de floración y distribución de esta especie.
Journal Article
The Chemistry and Biological Activities of Natural Products from Northern African Plant Families: From Taccaceae to Zygophyllaceae
by
Malange, Yvette I.
,
Njume, Leonel E.
,
Ntie-Kang, Fidele
in
Africa
,
Africans
,
bioactive properties
2016
Traditional medicinal practices have a profound influence on the daily lives of people living in developing countries, particularly in Africa, since the populations cannot generally afford the cost of Western medicines. We have undertaken to investigate the correlation between the uses of plants in Traditional African medicine and the biological activities of the derived natural products, with the aim to validate the use of traditional medicine in Northern African communities. The literature is covered for the period 1959–2015 and part III of this review series focuses on plant families with names beginning with letters T to Z. The authors have focused on curating data from journals in natural products and phytomedicine. Within each journal home page, a query search based on country name was conducted. All articles “hits” were then verified, one at a time, that the species was harvested within the Northern African geographical regions. The current data partly constitutes the bases for the development of the Northern African natural compounds database. The review discusses 284 plant-based natural compounds from 34 species and 11 families. It was observed that the ethnobotanical uses of less than 40 % of the plant species surveyed correlated with the bioactivities of compounds identified.
Graphical Abstract
Journal Article