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result(s) for
"Torulaspora - classification"
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Winemaking and Bioprocesses Strongly Shaped the Genetic Diversity of the Ubiquitous Yeast Torulaspora delbrueckii
2014
The yeast Torulaspora delbrueckii is associated with several human activities including oenology, bakery, distillery, dairy industry, etc. In addition to its biotechnological applications, T. delbrueckii is frequently isolated in natural environments (plant, soil, insect). T. delbrueckii is thus a remarkable ubiquitous yeast species with both wild and anthropic habitats, and appears to be a perfect yeast model to search for evidence of human domestication. For that purpose, we developed eight microsatellite markers that were used for the genotyping of 110 strains from various substrates and geographical origins. Microsatellite analysis showed four genetic clusters: two groups contained most nature strains from Old World and Americas respectively, and two clusters were associated with winemaking and other bioprocesses. Analysis of molecular variance (AMOVA) confirmed that human activities significantly shaped the genetic variability of T. delbrueckii species. Natural isolates are differentiated on the basis of geographical localisation, as expected for wild population. The domestication of T. delbrueckii probably dates back to the Roman Empire for winemaking (∼ 1900 years ago), and to the Neolithic era for bioprocesses (∼ 4000 years ago). Microsatellite analysis also provided valuable data regarding the life-cycle of the species, suggesting a mostly diploid homothallic life. In addition to population genetics and ecological studies, the microsatellite tool will be particularly useful for further biotechnological development of T. delbrueckii strains for winemaking and other bioprocesses.
Journal Article
Torulaspora indica a novel yeast species isolated from coal mine soils
2012
Four yeast strains (APSS 805, APSS 806, APSS 815 and AP-18) belonging to a novel
Torulaspora
species were isolated from coal mine soils of Singareni in Andhra Pradesh state, India. Another strain (PBA-22) was isolated from agricultural field soil from Gujarat state, India. The vegetative cells of all these strains were round, haploid and produced asci by conjugation between independent cells or mother cell and bud, with rough ascospores, suggesting their possible relation to ascomycetous yeast genus
Torulaspora
. Phylogenetic analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene and Internal Transcribed Spacer (ITS) regions revealed that, among the five strains, three viz. APSS 805, APSS 806 and APSS 815 have identical sequences. The other two strains (AP-18 and PBA-22) differed from the other three strains in less than 1% nucleotide substitutions in the combined D1/D2 domain and ITS sequences, indicating that all of them (five strains) may belong to the same species. These five strains were closely related to
Torulaspora globosa,
but showed more than 3–7% sequence divergence from
T. globosa
and all other species in the genus
Torulaspora
in the combined sequence analysis of D1/D2 domain and ITS region of rRNA gene. In addition, these strains also showed distinct microsatellite finger-printing pattern from related species and differed in several physiological responses suggesting that these strains belong to a novel species of
Torulaspora
. We propose to name these strains as
Torulaspora indica
sp. nov., and designate APSS 805
T
= MTCC 9772
T
= CBS 12408
T
as the type strain of this novel species. The Mycobank number of the novel species is MB 563738.
Journal Article
Torulaspora quercuum sp. nov. and Candida pseudohumilis sp. nov., novel yeasts from human and forest habitats
by
Bai, Feng-Yan
,
Wang, Huamin
,
Li, Juan
in
Candida
,
Candida - classification
,
Candida - cytology
2009
Strains XZ-46A, XZ-105, XZ-129 and XZ-281T isolated from the oral cavities of healthy Tibetan volunteers were revealed to represent two novel ascomycetous yeast species by molecular taxonomic characterizations. Strain XZ-281T was most closely related to Candida humilis, but differed from the type strain of the species by eight (1.2%) substitutions in the 26S rRNA gene D1/D2 domain and by >100 (>20%) mismatches in the internal transcribed spacer (ITS) region. Strains XZ-46A, XZ-105 and XZ-129 had identical or similar D1/D2 and ITS sequences with each other and with strain 17YFT isolated from a leaf of an oak tree (Quercus sp.). The closest relative of this group was Torulaspora microellipsoides. They differed from the type strain of the species by five (0.9%) substitutions in the D1/D2 domain and >70 (>15%) mismatches in the ITS region. A sexual state was observed in strain 17YFT, but not in the other four oral strains. An anamorphic name Candida pseudohumilis sp. nov. is proposed for strain XZ-281T (=AS 2.3956T=CBS 11404T) and a teleomorphic name Torulaspora quercuum sp. nov. is proposed for strain 17YFT (=AS 2.3768T=CBS 11403T) and the other three oral strains.
Journal Article
Biodiversity of yeasts isolated during spontaneous fermentation of cool climate grape musts
by
Skotniczny Magdalena
,
Skoneczny Szymon
,
Satora Paweł
in
Biodiversity
,
Chemical composition
,
Fermentation
2021
Biodiversity of native yeasts, especially in winemaking, has hidden potential. In order to use the value of non-Saccharomyces strains in wine production and to minimise the possibility of its deterioration, it is necessary to thoroughly study the yeast cultures present on grape fruits and in grape must, as well as their metabolic properties. The aim of the study was to characterise the yeast microbiota found during spontaneous fermentation of grape musts obtained from grape varieties ‘Rondo’, ‘Regent’ and ‘Johanniter’. Grapes from two vineyards (Srebrna Góra and Zadora) located in southern Poland were used for the research. Succession of subsequent groups of yeasts was observed during the process. Metschnikowia pulcherrima yeasts were identified both at the beginning and the end of the process. Hanseniaspora uvarum, Wickerhamomyces onychis and Torulaspora delbrueckii strains were also identified during the fermentation. Torulaspora delbrueckii and Wickerhamomyces onychis strains were identified only in grape musts obtained from grapes of the Zadora vineyard. These strains may be characteristic of this vineyard and shape the identity of wines formed in it. Our research has provided specific knowledge on the biodiversity of yeast cultures on grapes and during their spontaneous fermentation. The research results presented indicate the possibility of using native strains for fermentation of grape musts, allowing to obtain a product with favourable chemical composition and sensory profile.
Journal Article
Not your ordinary yeast: non‐Saccharomyces yeasts in wine production uncovered
by
Pretorius, Isak S.
,
Jolly, Neil P.
,
Varela, Cristian
in
alcoholic fermentation
,
aroma
,
Bacteria - metabolism
2014
Saccharomyces cerevisiae and grape juice are ‘natural companions’ and make a happy wine marriage. However, this relationship can be enriched by allowing ‘wild’ non‐Saccharomyces yeast to participate in a sequential manner in the early phases of grape must fermentation. However, such a triangular relationship is complex and can only be taken to ‘the next level’ if there are no spoilage yeast present and if the ‘wine yeast’ – S. cerevisiae – is able to exert its dominance in time to successfully complete the alcoholic fermentation. Winemakers apply various ‘matchmaking’ strategies (e.g. cellar hygiene, pH, SO₂, temperature and nutrient management) to keep ‘spoilers’ (e.g. Dekkera bruxellensis) at bay, and allow ‘compatible’ wild yeast (e.g. Torulaspora delbrueckii, Pichia kluyveri, Lachancea thermotolerans and Candida/Metschnikowia pulcherrima) to harmonize with potent S. cerevisiae wine yeast and bring the best out in wine. Mismatching can lead to a ‘two is company, three is a crowd’ scenario. More than 40 of the 1500 known yeast species have been isolated from grape must. In this article, we review the specific flavour‐active characteristics of those non‐Saccharomyces species that might play a positive role in both spontaneous and inoculated wine ferments. We seek to present ‘single‐species’ and ‘multi‐species’ ferments in a new light and a new context, and we raise important questions about the direction of mixed‐fermentation research to address market trends regarding so‐called ‘natural’ wines. This review also highlights that, despite the fact that most frontier research and technological developments are often focussed primarily on S. cerevisiae, non‐Saccharomyces research can benefit from the techniques and knowledge developed by research on the former.
Journal Article
The effects of co- and sequential inoculation of Torulaspora delbrueckii and Pichia kluyveri on chemical compositions of durian wine
by
Huang, Dejian
,
Liu, Shao-Quan
,
Chua, Jian-Yong
in
Acetates - metabolism
,
Acetic acid
,
Acid production
2017
This is a first study on using two non-
Saccharomyces
yeasts,
Torulaspora delbrueckii
Biodiva and
Pichia kluyveri
FrootZen to produce durian wine via co-inoculation (Co-I) and sequential inoculation (Seq-I).
T. delbrueckii
inhibited the growth of
P. kluyveri
and
P. kluyveri
also partly retarded the growth of
T. delbrueckii
in Co-I and Seq-I treatments. Co-I and Seq-I produced similar levels of ethanol to
T. delbrueckii
Biodiva monoculture. In addition, Seq-I increased malic acid degradation and higher succinic acid production. Compared with
T. delbrueckii
Biodiva, Co-I produced similar amounts of ethyl esters, higher alcohols and moderately increased levels of ethyl acetate. Seq-I 2th (
T. delbrueckii
inoculated after 2 days fermentation with
P. kluyveri
) and Seq-I 5th produced excessive amounts of ethyl acetate (≥ 80 mg/L) but relatively lower levels of higher alcohols. This study suggested that Co-I could complete alcoholic fermentation with more complex aromas and might be novel way for wine making.
Journal Article
Non-Conventional Yeast Strains Increase the Aroma Complexity of Bread
by
Rezaei, Mohammad Naser
,
Verstrepen, Kevin J.
,
Herrera-Malaver, Beatriz
in
Aroma
,
Bakeries
,
Baking yeast
2016
Saccharomyces cerevisiae is routinely used yeast in food fermentations because it combines several key traits, including fermentation efficiency and production of desirable flavors. However, the dominance of S. cerevisiae in industrial fermentations limits the diversity in the aroma profiles of the end products. Hence, there is a growing interest in non-conventional yeast strains that can help generate the diversity and complexity desired in today's diversified and consumer-driven markets. Here, we selected a set of non-conventional yeast strains to examine their potential for bread fermentation. Here, we tested ten non-conventional yeasts for bread fermentation, including two Saccharomyces species that are not currently used in bread making and 8 non-Saccharomyces strains. The results show that Torulaspora delbrueckii and Saccharomyces bayanus combine satisfactory dough fermentation with an interesting flavor profile. Sensory analysis and HS-SPME-GC-MS analysis confirmed that these strains produce aroma profiles that are very different from that produced by a commercial bakery strain. Moreover, bread produced with these yeasts was preferred by a majority of a trained sensory panel. These results demonstrate the potential of T. delbrueckii and S. bayanus as alternative yeasts for bread dough leavening, and provide a general experimental framework for the evaluation of more yeasts and bacteria.
Journal Article
In Vitro Probiotic Characterization of Yeasts with their Postbiotics' Antioxidant Activity and Biofilm Inhibition Capacity
by
Çakır, İbrahim
,
Aktepe, Yeşim
,
Aydın, Furkan
in
Antioxidants
,
Biofilms
,
Cronobacter sakazakii
2024
This study evaluated the in vitro probiotic potential and postbiotic properties of yeast strains isolated from traditional fermented foods, emphasizing antioxidant activity (AOA) and biofilm inhibition capacity (BIC). The yeasts were molecularly confirmed using start codon targeted polymorphisms as Kluyveromyces lactis (n = 17), Saccharomyces cerevisiae (n = 9), Pichia kudriavzevii (n = 6), P. fermentans (n = 4), Wickerhamomyces anomalus (n = 2), and Torulaspora delbrueckii (n = 1). The probiotic assessment of live cells included viability in simulated gastric and pancreatic juices, autoaggregation, hydrophobicity, and AOA, using S. boulardii MYA-796 as reference. Additionally, cell-free supernatants (CFS) were tested for AOA and BIC against Cronobacter sakazakii, Listeria monocytogenes, Pseudomonas aeruginosa, and Staphylococcus aureus. Several strains exhibited significantly higher in vitro probiotic characteristics compared to S. boulardii MYA-796 (P < 0.05), particularly in gastric and pancreatic survival, hydrophobicity, and AOA. Notably, CFS exhibited greater AOA than live cells and strong BIC, especially against L. monocytogenes and S. aureus. Multivariate analysis identified K. lactis TC11, S. cerevisiae M33T1-2, P. kudriavzevii S96, W. anomalus OB7Y1, and T. delbrueckii KY31 as having superior probiotic properties, attributed to enhanced gastric survival, autoaggregation, and AOA. CFS of S. cerevisiae M33T1-2 and T. delbrueckii KY31 demonstrated significant BIC, with over 60% inhibition across all tested pathogens.
Journal Article
Diversity of culturable yeasts in phylloplane of sugarcane in Thailand and their capability to produce indole-3-acetic acid
by
Kawasaki, Hiroko
,
Kaewwichian, Rungluk
,
Limtong, Savitree
in
Acetic acid
,
Analysis
,
Applied Microbiology
2014
Yeasts were isolated by the enrichment technique from the phylloplane of 94 samples of sugarcane leaf collected from seven provinces in Thailand. All sugarcane leaf samples contained yeasts and 158 yeast strains were obtained. On the basis of the D1/D2 domain of the large subunit rRNA gene sequence analysis, 144 strains were identified to 24 known species in 14 genera belonging to the Ascomycota
viz
.
Candida akabanensis
,
Candida dendronema
,
Candida mesorugosa
,
Candida michaelii
,
Candida nivariensis
,
Candida rugosa
,
Candida orthopsilosis
,
Candida quercitrusa
,
Candida tropicalis
,
Candida xylopsoci
,
Cyberlindnera fabianii
,
Cyberlindnera rhodanensis
,
Debaryomyces nepalensis
,
Hannaella
aff.
coprosmaensis
,
Hanseniaspora guilliermondii
,
Kluyveromyces marxianus
,
Lachancea thermotolerans
,
Lodderomyces elongisporus
,
Metschnikowia koreensis
,
Meyerozyma caribbica
,
Millerozyma koratensis
,
Pichia kudriavzevii
,
Torulaspora delbrueckii
and
Wickerhamomyces edaphicus,
and 12 species in six genera of the Basidiomycota
viz
. Cryptococcus flavescens
,
Cryptococcus laurentii
,
Cryptococcus rajasthanensis
,
Kwoniella heveanensis
,
Rhodosporidium fluviale
,
Rhodosporidium paludigenum
,
Rhodotorula mucilaginosa
,
Rhodotorula sesimbrana
,
Rhodotorula taiwanensis
,
Sporidiobolus ruineniae
,
Sporobolomyces carnicolor
and
Sporobolomyces nylandii.
Seven strains were identical or similar to four undescribed species. Another seven strains represented four novels species in the genus
Metschnikowia
,
Nakazawaea
,
Wickerhamomyces
and
Yamadazyma
. The results revealed 69 % of the isolated strains were ascomycete yeasts and 31 % were basidiomycete yeast. The most prevalent species was
M. caribbica
with a 23 % frequency of occurrence followed by
Rh. taiwanensis
(11 %) and
C. tropicalis
(10 %). All strains were assessed for indole-3-acetic acid (IAA) producing capability showing that 69 strains had the capability of producing IAA when cultivated in yeast extract peptone dextrose broth supplemented with 1 g/L
l
-tryptophan. The highest IAA concentration of 565.1 mg/L was produced by
R. fluviale
DMKU-RK253.
Journal Article
From grape berries to wine: population dynamics of cultivable yeasts associated to “Nero di Troia” autochthonous grape cultivar
by
Spano, Giuseppe
,
Garofalo, Carmela
,
Tristezza, Mariana
in
Acids
,
Analysis
,
Applied Microbiology
2016
The aim of this work was to study the biodiversity of yeasts isolated from the autochthonous grape variety called “Uva di Troia”, monitoring the natural diversity from the grape berries to wine during a vintage. Grapes were collected in vineyards from two different geographical areas and spontaneous alcoholic fermentations (AFs) were performed. Different restriction profiles of ITS–5.8S rDNA region, corresponding to
Saccharomyces cerevisiae
,
Issatchenkia orientalis
,
Metschnikowia pulcherrima
,
Hanseniaspora uvarum
,
Candida zemplinina
,
Issatchenkia terricola
,
Kluyveromyces thermotolerans
,
Torulaspora delbrueckii
,
Metschnikowia chrysoperlae
,
Pichia fermentans
,
Hanseniaspora opuntiae
and
Hanseniaspora guilliermondii
, were observed. The yeast occurrences varied significantly from both grape berries and grape juices, depending on the sampling location. Furthermore, samples collected at the end of AF revealed the great predominance of
Saccharomyces cerevisiae
, with a high intraspecific biodiversity. This is the first report on the population dynamics of ‘cultivable’ microbiota diversity of “Uva di Troia” cultivar from the grape to the corresponding wine (“Nero di Troia”), and more general for Southern Italian oenological productions, allowing us to provide the basis for an improved management of wine yeasts (with both non-
Saccharomyces
and
Saccharomyces
) for the production of typical wines with desired unique traits. A certain geographical-dependent variability has been reported, suggesting the need of local based formulation for autochthonous starter cultures, especially in the proportion of the different species/strains in the design of mixed microbial preparations.
Journal Article