Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
4
result(s) for
"UDiTaS"
Sort by:
UDiTaS™, a genome editing detection method for indels and genome rearrangements
by
Giannoukos, Georgia
,
Skor, Maxwell N.
,
Bothmer, Anne
in
Animal Genetics and Genomics
,
Biomedical and Life Sciences
,
CRISPR/CAS9
2018
Background
Understanding the diversity of repair outcomes after introducing a genomic cut is essential for realizing the therapeutic potential of genomic editing technologies. Targeted PCR amplification combined with Next Generation Sequencing (NGS) or enzymatic digestion, while broadly used in the genome editing field, has critical limitations for detecting and quantifying structural variants such as large deletions (greater than approximately 100 base pairs), inversions, and translocations.
Results
To overcome these limitations, we have developed a Uni-Directional Targeted Sequencing methodology, UDiTaS, that is quantitative, removes biases associated with variable-length PCR amplification, and can measure structural changes in addition to small insertion and deletion events (indels), all in a single reaction. We have applied UDiTaS to a variety of samples, including those treated with a clinically relevant pair of
S. aureus
Cas9 single guide RNAs (sgRNAs) targeting
CEP290
, and a pair of
S. pyogenes
Cas9 sgRNAs at T-cell relevant loci. In both cases, we have simultaneously measured small and large edits, including inversions and translocations, exemplifying UDiTaS as a valuable tool for the analysis of genome editing outcomes.
Conclusions
UDiTaS is a robust and streamlined sequencing method useful for measuring small indels as well as structural rearrangements, like translocations, in a single reaction. UDiTaS is especially useful for pre-clinical and clinical application of gene editing to measure on- and off-target editing, large and small.
Journal Article
Bold and Beautiful: Udita Goswami
2006
My home in Mumbai. And when I'm in my hometown, Dehradun, it's a place called 'Machan' which is very peaceful and quiet.
Newspaper Article
Arshad Warsi asks 'Kisse Pyaar Karoon'
2005
The story revolves around three best friends, Sid ([Arshad Warsi]), John ([Aashish Choudhary]) and Amit (Yash Tonk). Their life is full of fun, frolic and adventure, but it takes a twist when John meets Sheetal ([Udita Goswami]), who wishes to hook him for all his wealth. Sid and Amit understand her intentions and decide to bring John back. From there begins the roller coaster of rib-tickling comedy.
Newspaper Article
Judge Juhi
2012
The musical about starcrossed lovers is a slapstick comedy loaded with (mostly) mindless gags. Those who are looking for something intelligent and a story that makes sense should avoid this film, which stars Tusshar Kapoor and a host of familiar supporting actors. This is a movie that will appeal more to those who enjoy the fast-food films like Housefull, No Entry and Yamla Pagla Deewana. The funny moments and nice musical numbers balance out a silly story and over-acting. Watch this, but with your brain switched off.
Newspaper Article