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"adaptive correlation coefficient"
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Research on Noise Reduction and Analysis of Reciprocating Friction Vibration Signals Based on the Complementary Ensemble Empirical Mode Decomposition
by
Liu, Zongxiao
,
Wei, Haijun
,
Yu, Yier
in
adaptive correlation coefficient
,
Algorithms
,
Comparative analysis
2026
This paper presents an adaptive noise reduction method based on Complementary Ensemble Empirical Mode Decomposition (CEEMD) to address the non-stationary characteristics and noise interference present in friction vibration signals from mechanical equipment. and friction testing machine simulation experiments. The performance of CEEMD and Ensemble Empirical Mode Decomposition (EEMD) was compared through MATLAB R2023b simulations and experiments conducted on a friction testing machine. CEEMD achieved a computational efficiency 85.6% higher than that of EEMD and effectively reduced mode aliasing. Among them, the adaptive correlation coefficient screening method performed well in signal reconstruction, and the high correlation (correlation coefficient > 0.8) between the denoised signal and the laboratory noise signal was verified using the multi-scale permutation entropy (MPE) theory, which is of great significance for early diagnosis of mechanical faults, prediction of equipment life and timely maintenance decisions.
Journal Article
Leaf area index estimation model for UAV image hyperspectral data based on wavelength variable selection and machine learning methods
2021
Background
To accurately estimate winter wheat leaf area index (LAI) using unmanned aerial vehicle (UAV) hyperspectral imagery is crucial for crop growth monitoring, fertilization management, and development of precision agriculture.
Methods
The UAV hyperspectral imaging data, Analytical Spectral Devices (ASD) data, and LAI were simultaneously obtained at main growth stages (jointing stage, booting stage, and filling stage) of various winter wheat varieties under various nitrogen fertilizer treatments. The characteristic bands related to LAI were extracted from UAV hyperspectral data with different algorithms including first derivative (FD), successive projections algorithm (SPA), competitive adaptive reweighed sampling (CARS), and competitive adaptive reweighed sampling combined with successive projections algorithm (CARS_SPA). Furthermore, three modeling machine learning methods including partial least squares regression (PLSR), support vector machine regression (SVR), and extreme gradient boosting (Xgboost) were used to build LAI estimation models.
Results
The results show that the correlation coefficient between UAV and ASD hyperspectral data is greater than 0.99, indicating the UAV data can be used for estimation of wheat growth information. The LAI bands selected by using different algorithms were slightly different among the 15 models built in this study. The Xgboost model using nine consecutive characteristic bands selected by CARS_SPA algorithm as input was proved to have the best performance. This model yielded identical results of coefficient of determination (0.89) for both calibration set and validation set, indicating a high accuracy of this model.
Conclusions
The Xgboost modeling method in combine with CARS_SPA algorithm can reduce input variables and improve the efficiency of model operation. The results provide reference and technical support for nondestructive and rapid estimation of winter wheat LAI by using UAV.
Journal Article
Serum Vitamin D Level and Rheumatoid Arthritis Disease Activity: Review and Meta-Analysis
by
Liu, Jian
,
Lin, Jin
,
Davies, Michael L.
in
25-Hydroxyvitamin D
,
Adaptive immunity
,
Adaptive search techniques
2016
The evidence from epidemiological studies concerning the relationship between serum vitamin D concentrations and rheumatoid arthritis (RA) is inconsistent. This meta-analysis is aimed at determining the magnitude of the correlation between this common autoimmune disease and vitamin D, an important nutrient known to dampen adaptive immune responses.
Through multiple search strategies, relevant literature was identified and evaluated for quality before May 16 2015. Data extracted from eligible studies was synthesized to calculate pooled correlation coefficient (r), mean difference (MD) and odds ratio (OR). The Venice criteria were applied to assess the credibility of the evidence for each statistically significant association.
A total of 24 reports involving 3489 patients were selected for analysis. RA patients had lower vitamin D levels than healthy controls (MD:-16.52 nmol/L, 95% confidence intervals [CI]:-18.85 to -14.19 nmol/L). There existed a negative relationship between serum 25-hydroxyvitamin D (25OHD) level and disease activity index, e.g. 25OHD vs. Disease Activity Score in 28 joints (DAS28): r = -0.13, 95% CI -0.16 to -0.09; 25OHD vs. C-reactive protein: r = -0.12, 95% CI -0.23 to -0.00. Additionally, latitude-stratified subgroup analysis yielded a relatively stronger negative correlation between 25OHD and DAS28 in low-latitude areas. This inverse relationship also appeared more significant in developing countries than in developed countries. No publication bias was detected.
RA patients had lower vitamin D values than healthy controls. There was a negative association between serum vitamin D and RA disease activity. However, more strictly controlled studies are needed to validate these findings.
Journal Article
Filtering procedures for untargeted LC-MS metabolomics data
by
Dudoit, Sandrine
,
Carlsson, Henrik
,
Whitehead, Todd
in
Adaptive filters
,
Algorithms
,
Automation
2019
Background
Untargeted metabolomics datasets contain large proportions of uninformative features that can impede subsequent statistical analysis such as biomarker discovery and metabolic pathway analysis. Thus, there is a need for versatile and data-adaptive methods for filtering data prior to investigating the underlying biological phenomena. Here, we propose a data-adaptive pipeline for filtering metabolomics data that are generated by liquid chromatography-mass spectrometry (LC-MS) platforms. Our data-adaptive pipeline includes novel methods for filtering features based on blank samples, proportions of missing values, and estimated intra-class correlation coefficients.
Results
Using metabolomics datasets that were generated in our laboratory from samples of human blood, as well as two public LC-MS datasets, we compared our data-adaptive filtering method with traditional methods that rely on non-method specific thresholds. The data-adaptive approach outperformed traditional approaches in terms of removing noisy features and retaining high quality, biologically informative ones. The R code for running the data-adaptive filtering method is provided at
https://github.com/courtneyschiffman/Metabolomics-Filtering
.
Conclusions
Our proposed data-adaptive filtering pipeline is intuitive and effectively removes uninformative features from untargeted metabolomics datasets. It is particularly relevant for interrogation of biological phenomena in data derived from complex matrices associated with biospecimens.
Journal Article
Two-stage motion artefact reduction algorithm for electrocardiogram using weighted adaptive noise cancelling and recursive Hampel filter
by
Ghaleb, Fuad A.
,
Kamat, Maznah Bte
,
Rohani, Mohd Foad
in
Acceleration
,
Adaptive algorithms
,
Adaptive filters
2018
The presence of motion artefacts in ECG signals can cause misleading interpretation of cardiovascular status. Recently, reducing the motion artefact from ECG signal has gained the interest of many researchers. Due to the overlapping nature of the motion artefact with the ECG signal, it is difficult to reduce motion artefact without distorting the original ECG signal. However, the application of an adaptive noise canceler has shown that it is effective in reducing motion artefacts if the appropriate noise reference that is correlated with the noise in the ECG signal is available. Unfortunately, the noise reference is not always correlated with motion artefact. Consequently, filtering with such a noise reference may lead to contaminating the ECG signal. In this paper, a two-stage filtering motion artefact reduction algorithm is proposed. In the algorithm, two methods are proposed, each of which works in one stage. The weighted adaptive noise filtering method (WAF) is proposed for the first stage. The acceleration derivative is used as motion artefact reference and the Pearson correlation coefficient between acceleration and ECG signal is used as a weighting factor. In the second stage, a recursive Hampel filter-based estimation method (RHFBE) is proposed for estimating the ECG signal segments, based on the spatial correlation of the ECG segment component that is obtained from successive ECG signals. Real-World dataset is used to evaluate the effectiveness of the proposed methods compared to the conventional adaptive filter. The results show a promising enhancement in terms of reducing motion artefacts from the ECG signals recorded by a cost-effective single lead ECG sensor during several activities of different subjects.
Journal Article
Early stratification of radiotherapy response by activatable inflammation magnetic resonance imaging
by
Wang, Zhantong
,
Zhou, Zijian
,
Tang, Longguang
in
631/1647/245/1628
,
631/67/2321
,
639/301/357/354
2020
Tumor heterogeneity is one major reason for unpredictable therapeutic outcomes, while stratifying therapeutic responses at an early time may greatly benefit the better control of cancer. Here, we developed a hybrid nanovesicle to stratify radiotherapy response by activatable inflammation magnetic resonance imaging (aiMRI) approach. The high Pearson’s correlation coefficient
R
values are obtained from the correlations between the
T
1
relaxation time changes at 24–48 h and the ensuing adaptive immunity (
R
= 0.9831) at day 5 and the tumor inhibition ratios (
R
= 0.9308) at day 18 after different treatments, respectively. These results underscore the role of acute inflammatory oxidative response in bridging the innate and adaptive immunity in tumor radiotherapy. Furthermore, the aiMRI approach provides a non-invasive imaging strategy for early prediction of the therapeutic outcomes in cancer radiotherapy, which may contribute to the future of precision medicine in terms of prognostic stratification and therapeutic planning.
Non-invasive approaches to stratify early responses to therapy are of great value to improve cancer patient management. Here the authors design a hybrid nanovesicle-based activatable inflammation magnetic resonance method for the early prediction of response to radiotherapy.
Journal Article
Adaptive frequency modulation optimization algorithm for supporting power grid of large-scale energy storage power station based on small samples
2024
Addressing frequency instability issues stemming from scarce modulation resources and limited willingness to modulate in large-scale energy storage power station grids, this paper introduces a small-sample-based adaptive optimization algorithm for frequency modulation. Leveraging cross-correlation coefficients of small sample nodes, it analyzes and extracts frequency modulation characteristics, optimizing existing fluctuations to enhance adaptive control efficiency. Experimental outcomes demonstrate its effectiveness in adaptively optimizing frequency modulation, yielding low modulation and initial disturbances across varying scenarios, thereby showcasing robust adaptive optimization performance.
Journal Article
Accuracy and Reliability of the Kinect Version 2 for Clinical Measurement of Motor Function
2016
The introduction of low cost optical 3D motion tracking sensors provides new options for effective quantification of motor dysfunction.
The present study aimed to evaluate the Kinect V2 sensor against a gold standard motion capture system with respect to accuracy of tracked landmark movements and accuracy and repeatability of derived clinical parameters.
Nineteen healthy subjects were concurrently recorded with a Kinect V2 sensor and an optical motion tracking system (Vicon). Six different movement tasks were recorded with 3D full-body kinematics from both systems. Tasks included walking in different conditions, balance and adaptive postural control. After temporal and spatial alignment, agreement of movements signals was described by Pearson's correlation coefficient and signal to noise ratios per dimension. From these movement signals, 45 clinical parameters were calculated, including ranges of motions, torso sway, movement velocities and cadence. Accuracy of parameters was described as absolute agreement, consistency agreement and limits of agreement. Intra-session reliability of 3 to 5 measurement repetitions was described as repeatability coefficient and standard error of measurement for each system.
Accuracy of Kinect V2 landmark movements was moderate to excellent and depended on movement dimension, landmark location and performed task. Signal to noise ratio provided information about Kinect V2 landmark stability and indicated larger noise behaviour in feet and ankles. Most of the derived clinical parameters showed good to excellent absolute agreement (30 parameters showed ICC(3,1) > 0.7) and consistency (38 parameters showed r > 0.7) between both systems.
Given that this system is low-cost, portable and does not require any sensors to be attached to the body, it could provide numerous advantages when compared to established marker- or wearable sensor based system. The Kinect V2 has the potential to be used as a reliable and valid clinical measurement tool.
Journal Article
An integrated EMD adaptive threshold denoising method for reduction of noise in ECG
2020
Electrocardiogram (ECG) denoising is a biomedical research area of great importance. In this paper, an integrated empirical mode decomposition adaptive threshold denoising method (IEMD-ATD) is proposed for processing ECGs. Three methods are included in the IEMD-ATD. First, an integrated EMD method based on a framework of complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN) is proposed to improve the decomposition quality and stability of raw ECGs. Second, a new grouping method for intrinsic mode functions (IMFs) is developed based on the energy and eigenperiod of IMFs. The grouping method is able to determine the boundaries among high-frequency noise predominant IMFs, useful information predominant IMFs and IMFs with low-frequency noises. Finally, an adaptive threshold denoising method is derived and used for denoising high-frequency noise predominant IMFs. There are two main contributions: 1) an adaptive threshold determination method based on the 3[sigma] criterion and 2) a peak filtering denoising method for retaining useful information contained in the values smaller than the threshold. Synthetic and real ECG data in the MIT-BIH database are utilised in experiments to illustrate the effectiveness of IEMD-ATD for ECG denoising. The results indicate that IEMD-ATD offers better performance in improving the signal-to-noise ratio (SNR) and correlation coefficient compared with the existing EMD denoising methods. Our method offers obvious advantages, especially in retaining detailed information on the QRS complex of the ECG, which is significant for the feature extraction of ECG signals and for pathological diagnosis.
Journal Article
Detection of tomato water stress based on terahertz spectroscopy
2023
China’s tomato cultivation area is nearly 15 thousand km 2 , and its annual tomato output is about 55 million tons, accounting for 7% of its total vegetable production. Because of the high drought sensitivity of tomatoes, water stress inhibits their nutrient uptake, leading to a decrease in tomato quality and yield. Therefore, the rapid, accurate and non-destructive detection of water status is important for scientifically and effectively managing tomato water and fertilizer, improving the efficiency of water resource utilization, and safeguarding tomato yield and quality. Because of the extreme sensitivity of terahertz spectroscopy to water, we proposed a tomato leaf moisture detection method based on terahertz spectroscopy and made a preliminary exploration of the relationship between tomato water stress and terahertz spectral data. Tomato plants were grown at four levels of water stress. Fresh tomato leaves were sampled at fruit set, moisture content was calculated, and spectral data were collected through a terahertz time-domain spectroscope. The raw spectral data were smoothed using the Savitzky–Golay algorithm to reduce interference and noise. Then the data were divided by the Kennard–Stone algorithm and the sample set was partitioned based on the joint X-Y distance (SPXY) algorithm into a calibration set and a prediction set at a ratio of 3:1. SPXY was found to be the better approach for sample division. On this basis, the stability competitive adaptive re-weighted sampling algorithm was used to extract the feature frequency bands of moisture content, and a multiple linear regression model of leaf moisture content was established under the single dimensions of power, absorbance and transmittance. The absorbance model was the best, with a prediction set correlation coefficient of 0.9145 and a root mean square error of 0.1199. To further improve the modeling accuracy, we used a support vector machine (SVM) to establish a tomato moisture fusion prediction model based on the fusion of three-dimensional terahertz feature frequency bands. As water stress intensified, the power and absorbance spectral values both declined, and both were significantly and negatively correlated with leaf moisture content. The transmittance spectral value increased gradually with the intensification of water stress, showing a significant positive correlation. The SVM-based three-dimensional fusion prediction model showed a prediction set correlation coefficient of 0.9792 and a root mean square error of 0.0531, indicating that it outperformed the three single-dimensional models. Hence, terahertz spectroscopy can be applied to the detection of tomato leaf moisture content and provides a reference for tomato moisture detection.
Journal Article