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result(s) for
"dendrology"
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Forest growth and yield modeling
2011
\"Completely updated and expanded new edition of this widely cited book, Modelling Forest Growth and Yield, 2nd Edition synthesizes current scientific literature, provides insights in how models are constructed, gives suggestions for future developments, and outlines keys for successful implementation of models.The book describes current modeling approaches for predicting forest growth and yield and explores the components that comprise the various modeling approaches. It provides the reader with the tools for evaluating and calibrating growth and yield models and outlines the steps necessary for developing a forest growth and yield model\"--
Integrating high resolution drone imagery and forest inventory to distinguish canopy and understory trees and quantify their contributions to forest structure and dynamics
by
Emmert, Fabiano
,
Santos, Ana Paula Ferreira dos
,
Celes, Carlos Henrique Souza
in
BASIC BIOLOGICAL SCIENCES
,
Biology and Life Sciences
,
Canopies
2020
Tree growth and survival differ strongly between canopy trees (those directly exposed to overhead light), and understory trees. However, the structural complexity of many tropical forests makes it difficult to determine canopy positions. The integration of remote sensing and ground-based data enables this determination and measurements of how canopy and understory trees differ in structure and dynamics. Here we analyzed 2 cm resolution RGB imagery collected by a Remotely Piloted Aircraft System (RPAS), also known as drone, together with two decades of bi-annual tree censuses for 2 ha of old growth forest in the Central Amazon. We delineated all crowns visible in the imagery and linked each crown to a tagged stem through field work. Canopy trees constituted 40% of the 1244 inventoried trees with diameter at breast height (DBH) > 10 cm, and accounted for ~70% of aboveground carbon stocks and wood productivity. The probability of being in the canopy increased logistically with tree diameter, passing through 50% at 23.5 cm DBH. Diameter growth was on average twice as large in canopy trees as in understory trees. Growth rates were unrelated to diameter in canopy trees and positively related to diameter in understory trees, consistent with the idea that light availability increases with diameter in the understory but not the canopy. The whole stand size distribution was best fit by a Weibull distribution, whereas the separate size distributions of understory trees or canopy trees > 25 cm DBH were equally well fit by exponential and Weibull distributions, consistent with mechanistic forest models. The identification and field mapping of crowns seen in a high resolution orthomosaic revealed new patterns in the structure and dynamics of trees of canopy vs. understory at this site, demonstrating the value of traditional tree censuses with drone remote sensing.
Journal Article
Convolutional neural networks for segmenting xylem vessels in stained cross-sectional images
by
Lillo-Saavedra, Mario
,
Gonzalo-Martín, Consuelo
,
Caetano, Cristina
in
Anatomy
,
Artificial Intelligence
,
Artificial neural networks
2020
Xylem is a vascular tissue that conducts sap (water and dissolved minerals) from the roots to the rest of the plant while providing physical support and resources. Sap is conducted within dead hollow cells (called vessels in flowering plants) arranged to form long pipes. Once formed, vessels do not change their structure and last from years to millennia. Vessels’ configuration (size, abundance, and spatial pattern) constitutes a record of the plant–environment relationship, and therefore, a tool for monitoring responses at the plant and ecosystem level. This information can be extracted through quantitative anatomy; however, the effort to identify and measure hundreds of thousands of conductive cells is an inconvenience to the progress needed to have solid assessments of the anatomical–environment relationship. In this paper, we propose an automatic methodology based on convolutional neural networks to segment xylem vessels. It includes a post-processing stage based on the use of redundant information to improve the performance of the outcome and make it useful in different sample configurations. Three different neural networks were tested obtaining similar results (pixel accuracy about 90%), which indicates that the methodology can be effectively used for segmentation of xylem vessels into images with non-homogeneous variations of illumination. The development of accurate automatic tools using CNNs would reduce the entry barriers associated with quantitative xylem anatomy expanding the use of this technique by the scientific community.
Journal Article
Jananese flowering cherries
2019
The Japanese sato-zakura, literally “village cherries”, represent perhaps the most popular subject of dendrology and ornamental horticulture. The authors rose to the occasion to write an extraordinary account of Japanese cherries and shed more light on a still confused group of these aristocratic flowering trees. Kuitert teaches at the Kyoto University of Art and Design while Peterse is a dedicated plant breeder and researcher of the Japanese flowering cherries. Rarely do professors have the time, or take the time, needed to solely write such a thoroughly prepared text. Both Dutchmen paid attention to detail, and the result is a well-written, high-quality product.
Journal Article
Extraordinary 21st Century Drought in the Po River Basin (Italy)
by
Tootle, Glenn
,
Formetta, Giuseppe
,
Gong, Jiaqi
in
21st century
,
Aquatic resources
,
Automation
2024
Recent research identified 2022 as being the year of lowest seasonal April–May–June–July (AMJJ) observed streamflow for the Po River Basin (PRB) in the past two centuries. Expanding upon this research, we applied filters (2-year to 30-year filters) to the AMJJ observed streamflow and identified the late 20th and 21st century as displaying extreme drought. In this study, we introduce PALEO-RECON, an automated reconstruction tool developed to leverage tree ring-based proxies and streamline regression processes. Using PALEO-RECON, we reconstructed the AMJJ streamflow, applying traditional regression techniques and using a nested approach in which 30-, 40-, and 50-year windows within the ~200-year observed streamflow record (1807 to 2022) were evaluated to capture uncertainty. Focusing on the 21st century (2000 to 2022), while several droughts in the ~2000-year paleo record may have exceeded the 2000 to 2022 drought, the recent PRB drought ending in 2022 was the lowest 23-year period in approximately 500 years, acknowledging that uncertainty increases as we move further back in time. When examining paleo and observed AMJJ streamflow records, deficit and surplus periods were evaluated, focusing on the potential “whiplash” between drought and pluvial events. We observed an increase in the frequency of whiplash events, which may be associated with a changing climate.
Journal Article
CentralBark Image Dataset and Tree Species Classification Using Deep Learning
2024
The task of tree species classification through deep learning has been challenging for the forestry community, and the lack of standardized datasets has hindered further progress. Our work presents a solution in the form of a large bark image dataset called CentralBark, which enhances the deep learning-based tree species classification. Additionally, we have laid out an efficient and repeatable data collection protocol to assist future works in an organized manner. The dataset contains images of 25 central hardwood and Appalachian region tree species, with over 19,000 images of varying diameters, light, and moisture conditions. We tested 25 species: elm, oak, American basswood, American beech, American elm, American sycamore, bitternut hickory, black cherry, black locust, black oak, black walnut, eastern cottonwood, hackberry, honey locust, northern red oak, Ohio buckeye, Osage-orange, pignut hickory, sassafras, shagbark hickory silver maple, slippery elm, sugar maple, sweetgum, white ash, white oak, and yellow poplar. Our experiment involved testing three different models to assess the feasibility of species classification using unaltered and uncropped images during the species-classification training process. We achieved an overall accuracy of 83.21% using the EfficientNet-b3 model, which was the best of the three models (EfficientNet-b3, ResNet-50, and MobileNet-V3-small), and an average accuracy of 80.23%.
Journal Article
Growth-Mortality Relationships in Piñon Pine (Pinus edulis) during Severe Droughts of the Past Century: Shifting Processes in Space and Time
2014
The processes leading to drought-associated tree mortality are poorly understood, particularly long-term predisposing factors, memory effects, and variability in mortality processes and thresholds in space and time. We use tree rings from four sites to investigate Pinus edulis mortality during two drought periods in the southwestern USA. We draw on recent sampling and archived collections to (1) analyze P. edulis growth patterns and mortality during the 1950s and 2000s droughts; (2) determine the influence of climate and competition on growth in trees that died and survived; and (3) derive regression models of growth-mortality risk and evaluate their performance across space and time. Recent growth was 53% higher in surviving vs. dying trees, with some sites exhibiting decades-long growth divergences associated with previous drought. Differential growth response to climate partly explained growth differences between live and dead trees, with responses wet/cool conditions most influencing eventual tree status. Competition constrained tree growth, and reduced trees' ability to respond to favorable climate. The best predictors in growth-mortality models included long-term (15-30 year) average growth rate combined with a metric of growth variability and the number of abrupt growth increases over 15 and 10 years, respectively. The most parsimonious models had high discriminatory power (ROC>0.84) and correctly classified ∼ 70% of trees, suggesting that aspects of tree growth, especially over decades, can be powerful predictors of widespread drought-associated die-off. However, model discrimination varied across sites and drought events. Weaker growth-mortality relationships and higher growth at lower survival probabilities for some sites during the 2000s event suggest a shift in mortality processes from longer-term growth-related constraints to shorter-term processes, such as rapid metabolic decline even in vigorous trees due to acute drought stress, and/or increases in the attack rate of both chronically stressed and more vigorous trees by bark beetles.
Journal Article
Environmental Sensitivity in AI Tree Bark Detection: Identifying Key Factors for Improving Classification Accuracy
by
Benes, Bedrich
,
Warner, Charles
,
Gazo, Rado
in
Accuracy
,
Artificial intelligence
,
Artificial neural networks
2025
Accurate tree species identification through bark characteristics is essential for effective forest management, but traditionally requires extensive expertise. This study leverages artificial intelligence (AI), specifically the EfficientNet-B3 convolutional neural network, to enhance AI-based tree bark identification, focusing on northern red oak (Quercus rubra), hackberry (Celtis occidentalis), and bitternut hickory (Carya cordiformis) using the CentralBark dataset. We investigated three environmental variables—time of day (lighting conditions), bark moisture content (wet or dry), and cardinal direction of observation—to identify sources of classification inaccuracies. Results revealed that bark moisture significantly reduced accuracy by 8.19% in wet conditions (89.32% dry vs. 81.13% wet). In comparison, the time of day had a significant impact on hackberry (95.56% evening) and northern red oak (80.80% afternoon), with notable chi-squared associations (p < 0.05). Cardinal direction had minimal effect (4.72% variation). Bitternut hickory detection consistently underperformed (26.76%), highlighting morphological challenges. These findings underscore the need for targeted dataset augmentation with wet and afternoon images, alongside preprocessing techniques like illumination normalization, to improve model robustness. Enhanced AI tools will streamline forest inventories, support biodiversity monitoring, and bolster conservation in dynamic forest ecosystems.
Journal Article
Examining long-term fuel and land use patterns at Ziyaret Tepe, Türkiye using an integrated analysis of seeds, wood charcoal, and dung spherulites
2024
This study presents the results of a combined dendrological, macrobotanical, and dung spherulite analysis of flotation samples collected from Bronze Age, Late Assyrian, and post-Assyrian contexts at the site of Ziyaret Tepe, located on the southern bank of the Tigris River in southeastern Anatolia. The results of this study show shifting fuel resource exploitation between pre-urbanized phases of the site (ca. 3000–1600 BCE), the urbanized Late Assyrian occupation (882–611 BCE), and the ruralized post-Assyrian (ca. 611 BCE–1500 CE) re-occupations of the site. During the Late Assyrian period, Ziyaret Tepe is thought to have been the location of the city of Tušhan, an important provincial capital of the Neo-Assyrian empire. Evidence for local deforestation near the Tigris River and expanding reliance on dung fuel use during this period indicate overexploitation of fuel resources as larger populations and extractive imperial economic policies placed heavier pressure on local land use. Qualitative dendrological data provides evidence for the intensification of fuelwood harvesting during this period, while textual evidence documented an expansive program of timbering to the north of the site intended to fuel imperial construction projects in the Assyrian heartland. Following the abandonment of Tušhan and the collapse of the Neo-Assyrian empire, local fuel resource exploitation during subsequent occupations of the site shifted towards the direct management of wood fuel resources and increasing reliance on rural pastoralism.
Journal Article
Present-day central African forest is a legacy of the 19th century human history
by
Doucet, Jean-Louis
,
Morin-Rivat, Julie
,
Gourlet-Fleury, Sylvie
in
19th century
,
Africa, Central
,
anthropogenic disturbance
2017
The populations of light-demanding trees that dominate the canopy of central African forests are now aging. Here, we show that the lack of regeneration of these populations began ca. 165 ya (around 1850) after major anthropogenic disturbances ceased. Since 1885, less itinerancy and disturbance in the forest has occurred because the colonial administrations concentrated people and villages along the primary communication axes. Local populations formerly gardened the forest by creating scattered openings, which were sufficiently large for the establishment of light-demanding trees. Currently, common logging operations do not create suitable openings for the regeneration of these species, whereas deforestation degrades landscapes. Using an interdisciplinary approach, which included paleoecological, archaeological, historical, and dendrological data, we highlight the long-term history of human activities across central African forests and assess the contribution of these activities to present-day forest structure and composition. The conclusions of this sobering analysis present challenges to current silvicultural practices and to those of the future. The world’s forests contain trillions of trees. Some of those trees require more light than others to mature, and certain species can only grow to reach the forest canopy if they have access to sunlight throughout their whole life. Central Africa is home to the second largest tropical rainforest in the world. Previous studies showed that few young trees of light-demanding species were growing to replace the old trees in this forest. As a result this population is aging and at risk of disappearing, which is a major concern. Many light-demanding tree species in the Central African forest are cut down for their valuable timber. However, if young trees do not grow to replace the mature ones that are logged, even logging operations that follow national and international environmental rules cannot guarantee the sustainability of these trees. As such, Morin-Rivat et al. set out to understand what changed in the Central African forest in the past to stop the regeneration of the light-demanding trees. The analyses focused on four species classified as light-demanding trees in part of Central Africa called the northern Congo Basin. Most of the trees in these species were about 165 years old. This was the case even though the different species grow at different rates, and it means that they all grew from young trees that settled in the middle of the 19th century. So what was it that changed after this period to stop this population of light-demanding trees in the Central African forest from regenerating? By combining information from a number of datasets and historical records, Morin-Rivat et al. arrived at the following conclusion. Before the mid-19th century, many people lived in the forest and their activities created clearings that turned the forest into a relatively patchy landscape. However from about 1850 onwards, when Europeans started to colonize the region, people and villages were moved out of the forests and closer to rivers and roads for administrative and commercial purposes. Moreover, many people were killed in conflicts or died because of newly introduced diseases, which also led to fewer people in the forest. As a result, the forest became less disturbed. With fewer clearings, fewer light-demanding trees would have had enough access to sunlight to grow to maturity. The findings of Morin-Rivat et al. show that disturbance is needed to maintain certain forest habitats and tree species, including light-demanding species of tree. As common logging operations do not create openings large enough to guarantee that such species will be able to establish themselves naturally, complementary treatments are needed. These might include selectively logging mature trees around young members of light-demanding species, or planting threatened species.
Journal Article