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Watermelon (Citrullus lanatus) is one of the most nutritional fruits that is widely distributed in the whole world. The nutritional compositions are mainly influenced by the genotype and environment. However, the metabolomics of different domestication status and different flesh colors watermelon types is not fully understood. In this study, we reported an extensive assessment of metabolomic divergence in the fruit flesh among Citrullus sp. and within Citrullus sp. We demonstrate that metabolic profiling was significantly different between the wild and cultivated watermelons, the apigenin 6-C-glucoside, luteolin 6-C-glucoside, chrysoeriol C-hexoside, naringenin C-hexoside, C-pentosyl-chrysoeriol O-hexoside, and sucrose are the main divergent metabolites. Correlation analysis results revealed that flavonoids were present in one tight metabolite cluster. The main divergent metabolites in different flesh-colored cultivated watermelon fruits are p-coumaric acid, 2,3-dihydroflavone, catechin, N-(3-indolylacetyl)-l-alanine, 3,4-dihydroxycinnamic acid, and pelargonidin o-hexoside. A total of 431 differentially accumulated metabolites were identified from pairwise comparative analyses. C. lanatus edible-seed watermelon (cultivars) and C. mucosospermus (wild) have similar fruit metabolic profiles and phenotypic traits, indicating that edible-seed watermelon may be a relative of wild species and a relatively primitive differentiation type of cultivated watermelon. Our data provide extensive knowledge for metabolomics-based watermelon improvement of Citrullus fruits meet their enhanced nutritive properties or upgraded germplasm utility values.

Different species of edible seed watermelons ( spp.) are cultivated in Asia and Africa for their colorful nutritious seeds. Consumer preference varies for watermelon seed coat color. Therefore, it is an important consideration for watermelon breeders. In 1940s, a genetic model of four genes, , , and , was proposed to elucidate the inheritance of seed coat color in watermelon. In this study, we developed three segregating F populations: Sugar Baby (dotted black seed, ) × plant introduction (PI) 482379 (green seed, ), Charleston Gray (dotted black seed, ) × PI 189225 (red seed, ), and Charleston Gray (dotted black seed, ) × UGA147 (clump seed, ) to re-examine the four-gene model and to map the four genes. In the dotted black × green population, the dotted black seed coat color ( ) is dominant to green seed coat color ( ). In the dotted black × red population, the dominant dotted black seed coat color and the recessive red seed coat color segregate for the and genes, where the gene is dominantly epistatic to the gene. However, the inheritance of the locus did not fit the four-gene model, thus we named it . In the dotted black × clump population, the clump seed coat color and the dotted black seed coat color segregate for and , where is recessively epistatic to . The , , , and loci were mapped on chromosomes 3, 5, 6, and 8, respectively, using QTL-seq and genotyping-by-sequencing (GBS). Kompetitive Allele Specific PCR (KASP™) assays and SNP markers linked to the four loci were developed to facilitate maker-assisted selection (MAS) for watermelon seed coat color.

Watermelon, one of the most important vegetable species in the world, is grown mostly for its fruit. However, there are also genotypes grown for their seeds in some parts of the world and that have snack potential due to their seed characteristics. This study was carried out to determine the morphological-molecular variation of edible-seeded watermelon genotypes and to identify markers associated with seed characteristics. Morphologically, 11 parameter measurements were made repeatedly. The highest value of the number of seed/fruit was determined in the HMKU-KR-15 genotype, and the highest value of 1000 seed weight was determined in the HMKU-KR-6 genotype. The lowest ease of cracking value and the highest weighted scaling score were detected in the HMKU-KR-20 genotype. In molecular research, a total of 135 bands in 24 genotypes were obtained using the inter-primary binding site (iPBS) marker technique and the polymorphism rate was calculated as 79.70%. Three main clusters emerged in cluster analysis. In structure analysis, it was determined that the genotypes consisted of two subpopulations. Seven markers were identified at levels of 29–46% related to seed characteristics. It has been determined that edible-seeded watermelon genotypes can be genetically distinguished using iPBS techniques. The results of this study can be used in breeding strategies to improve edible-seeded watermelon cultivars.

Watermelon (Citrullus lanatus) is an economically important fruit crop grown for consumption of its large edible fruit flesh. Pentatricopeptide-repeat (PPR) encoding genes, one of the large gene families in plants, are important RNA-binding proteins involved in the regulation of plant growth and development by influencing the expression of organellar mRNA transcripts. However, systematic information regarding the PPR gene family in watermelon remains largely unknown. In this comprehensive study, we identified and characterized a total of 422 C. lanatus PPR (ClaPPR) genes in the watermelon genome. Most ClaPPRs were intronless and were mapped across 12 chromosomes. Phylogenetic analysis showed that ClaPPR proteins could be divided into P and PLS subfamilies. Gene duplication analysis suggested that 11 pairs of segmentally duplicated genes existed. In-silico expression pattern analysis demonstrated that ClaPPRs may participate in the regulation of fruit development and ripening processes. Genotyping of 70 lines using 4 single nucleotide polymorphisms (SNPs) from 4 ClaPPRs resulted in match rates of over 0.87 for each validated SNPs in correlation with the unique phenotypes of flesh color, and could be used in differentiating red, yellow, or orange watermelons in breeding programs. Our results provide significant insights for a comprehensive understanding of PPR genes and recommend further studies on their roles in watermelon fruit growth and ripening, which could be utilized for cultivar development of watermelon.

World’s vegetable oil demand is increasing day by day and oil seed supply is limited to a dozen oil seed crops on commercial scale. Efforts were made to explore the potential of water melon a traditionally grown native crop of Indian arid zone having oil content over 30% and seed yield potential of 500–600 kg per hectare under rainfed conditions. An analysis was carried out to explore the suitability of watermelon [Citrullus lanatus (Thunb.)] oil for human consumption on the basis of fatty acid (FA) composition in selected genotypes. Total oil content ranged between 10.0 and 31.0%. Eleven FA were identified in seed oil. Linoleic, stearic, palmitic and oleic acid were found as major FA while myristic, heptadecanoic, arachidic, 9-hexadecenoic and 14-eicosenoic acid was present in traces. Linoleic acid single polyunsaturated FA contributor found in the range of 43.95% (WM-44) to 55.29% (WM-18). Saturated FA content ranged between 32.24 and 37.61%. Significant genetic variation was observed for mono-unsaturated FA. Metabolic capacity to inter-conversion of FA and nutritive value of watermelon oil was described on the basis of ratio of FA group. Total phenolics, antioxidant activity, peroxide value and oxidizability were also estimated along with oxidative stability of oil. Multivariate analysis showed that, oil content has positive correlation with linoleic acid. The Euclidean based UPGMA clustering revealed that genotypes WM-18 is most suitable for trait specific breeding program for high linoleic acid (n–6), desaturation ratio and oleic desaturation ratio with higher oil content and lowest palmitic acid.

Watermelon seed oil characteristics were evaluated to determine whether this oil could be exploited as an edible oil. Hexane extraction of watermelon seeds produced yields of 50% (w/w) oil. The refractive index, saponification and iodine value were 1.4712 (at 25 °C), 200 mg KOH/g and 156 g I/100 g, respectively. The acid and peroxide values were 2.4 mg KOH/g and 3.24 mequiv/kg, respectively. The induction time of the oil was also 5.14 h at 110 °C, which was measured for the first time. Total unsaturation contents of the oil was 81.6%, with linoleic acid (18:2) being the dominant fatty acid (68.3%). Considering that the watermelon seed oil was highly unsaturated, the relatively high induction time might indicate the presence of natural antioxidants. In addition, the influence of extraction parameters on extraction of oil from watermelon seed with hexane as a solvent was studied at several temperatures (40, 50, and 60 °C), times (1, 2, and 3 h) and solvent/kernel ratios (1:1, 2:1, and 3:1). The oil yield was primarily affected by the solvent/kernel ratio and then time and temperature, respectively. The protein content of the oil-free residue was 47%.