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The relationships between synthetic zeolites and their natural counterparts that have been unveiled by theoretical studies have contributed to improving the properties and applications of zeolite-based materials in strategic areas such as industrial catalysis, environmental protection, and solar energy harvesting. To pinpoint the role of modeling in zeolite science, we discuss an example of computationally driven problem solving: can tetrahedral frameworks sustain straight (i.e., 180°) Si-O-Si bond angles? The true crystal symmetry of zeolite ferrierite (FER), especially in its all-silica form, had been intensely debated for 30 years before being solved in the Pmnn space group. Yet there are indications that an Immm structure with energetically unfavorable linear Si-O-Si linkages could be formed at high temperature. To gather insight, we perform density functional theory (DFT) optimizations and frequency calculations of all-silica ferrierite in both the Pmnn and Immm space groups. Our results indicate that Pmnn is more stable than Immm, in line with experiments. While the Pmnn structure is a true minimum in the energy profile of ferrierite, the Immm structure has four imaginary frequency vibrations, three of which are localized on the 180° Si-O-Si angles. This suggests that ferrierites with Immm symmetry may be classified as metastable phases. Such a designation is also supported by first-principles molecular dynamics on Immm FER, showing that the average value of 180° actually results from Si-O-Si angle inversion. An implication of this study with interesting geological and technological consequences is the association of straight Si-O-Si angles experimentally detected in open-framework or low-density silicates to an angle-inversion process occurring at the femtosecond scale. Such flexibility of the apparently flat Si-O-Si linkages might play an important role in sorption phenomena, which are ubiquitous in geological processes and industrial applications alike.

Pozzolanic reaction of volcanic ash with hydrated lime is thought to dominate the cementing fabric and durability of 2000-year-old Roman harbor concrete. Pliny the Elder, however, in first century CE emphasized rock-like cementitious processes involving volcanic ash (pulvis) \"that as soon as it comes into contact with the waves of the sea and is submerged becomes a single stone mass (fierem unum lapidem), impregnable to the waves and every day stronger\" (Naturalis Historia 35.166). Pozzolanic crystallization of Al-tobermorite, a rare, hydrothermal, calcium-silicate-hydrate mineral with cation exchange capabilities, has been previously recognized in relict lime clasts of the concrete. Synchrotron-based X-ray microdiffraction maps of cementitious microstructures in Baianus Sinus and Portus Neronis submarine breakwaters and a Portus Cosanus subaerial pier now reveal that Al-tobermorite also occurs in the leached perimeters of feldspar fragments, zeolitized pumice vesicles, and in situ phillipsite fabrics in relict pores. Production of alkaline pore fluids through dissolution-precipitation, cation-exchange and/or carbonation reactions with Campi Flegrei ash components, similar to processes in altered trachytic and basaltic tuffs, created multiple pathways to post-pozzolanic phillipsite and Al-tobermorite crystallization at ambient seawater and surface temperatures. Long-term chemical resilience of the concrete evidently relied on water-rock interactions, as Pliny the Elder inferred. Raman spectroscopic analyses of Baianus Sinus Al-tobermorite in diverse microstructural environments indicate a cross-linked structure with Al3+ substitution for Si4+ in Q3 tetrahedral sites, and suggest coupled [Al3++Na+] substitution and potential for cation exchange. The mineral fabrics provide a geoarchaeological prototype for developing cementitious processes through low-temperature rock-fluid interactions, subsequent to an initial phase of reaction with lime that defines the activity of natural pozzolans. These processes have relevance to carbonation reactions in storage reservoirs for CO2 in pyroclastic rocks, production of alkali-activated mineral cements in maritime concretes, and regenerative cementitious resilience in waste encapsulations using natural volcanic pozzolans.

An updated and expanded data set that consists of 214 plagioclase-liquid equilibrium pairs from 40 experimental studies in the literature is used to recalibrate the thermodynamic model for the plagioclase-liquid hygrometer of Lange et al. (2009); the updated model is applicable to metaluminous and alkaline magmas. The model is based on the crystal-liquid exchange reaction between the anorthite (CaAl2Si2O8) and albite (NaAlSi3O8) components, and all available volumetric and calorimetric data for the pure end-member components are used in the revised model. The activities of the crystalline plagioclase components are taken from Holland and Powell (1992). Of the 214 experiments, 107 are hydrous and 107 are anhydrous. Four criteria were applied for inclusion of experiments in the final data set: (1) crystallinities <30%; (2) pure-H2O fluid saturated; (3) compositional totals (including H2O component) of 97-101% for hydrous quenched glasses and 98.5-101 for anhydrous quenched glasses; and (4) melt viscosities ≤5.2 log10 Pa·s. The final data set spans a wide range in liquid composition (45-80 wt% SiO2; 1-10 wt% Na2O+K2O), plagioclase composition (An17-95), temperature (750-1244°C), pressure (0-350 MPa), and H2O content (0-8.3 wt%). The water solubility model of Zhang et al. (2007) was applied to all hydrous experiments. The standard error estimate on the hygrometer model is 0.35 wt% H2O, and all liquid compositions are fitted equally well. Application of the model as a thermometer recovers temperatures to within ±12°, on average. Tests of the hygrometer on anhydrous piston-cylinder experiments in the literature, not included in the regression, show that the model is accurate at all pressures where plagioclase is stable. Applications of the hygrometer are made to natural rhyolites (Bishop Tuff, Katmai, and TobaTuff) with reported H2O analyses in quartz-hosted melt inclusions from the literature; the results show agreement. Applications of the hygrometer/thermometer are additionally made to natural rhyolites from Iceland and Glass Mountain, California. The updated model can be downloaded either as a program in Excel format or as a MatLab script from the Data Repository.

It is well known that trace element sensitivity in electron probe microanalysis (EPMA) is limited by intrinsic random variation in the X-ray continuum background and weak signals at low concentrations. The continuum portion of the background is produced by deceleration of the electron beam by the Coulombic field of the specimen atoms. In addition to the continuum, the background also includes interferences from secondary emission lines, \"holes\" in the continuum from secondary Bragg diffraction, non-linear curvature of the wavelength-dispersive spectrometer (WDS) continuum and other background artifacts. Typically, the background must be characterized with sufficient precision (along with the peak intensity of the emission line of interest, to obtain the net intensity for subsequent quantification), to attain reasonable accuracy for quantification of the elements of interest. Traditionally we characterize these background intensities by measuring on either side of the emission line and interpolate the intensity underneath the peak to obtain the net intensity. Instead, by applying the mean atomic number (MAN) background calibration curve method proposed in this paper for the background intensity correction, such background measurement artifacts are avoided through identification of outliers within a set of standards. We divide the analytical uncertainty of the MAN background calibration between precision errors and accuracy errors. The precision errors of the MAN background calibration are smaller than direct background measurement, if the mean atomic number of the sample matrix is precisely known. For a simple matrix and a suitable blank standard, a high-precision blank correction can offset the accuracy component of the MAN uncertainty. Use of the blank-corrected-MAN background calibration can further improve our measurement precision for trace elements compared to traditional off-peak measurements because the background determination is not limited by continuum X-ray counting statistics. For trace element mapping of a simple matrix, the background variance due to major element heterogeneity is exceedingly small and high-precision two-dimensional background correction is possible.

In this study, we use micro-X-ray absorption near-edge structures (µ-XANES) spectroscopy at the S K-edge to investigate the oxidation state of S in natural magmatic-hydrothermal apatite (Durango, Mexico, and Mina Carmen, Chile) and experimental apatites crystallized from volatile-saturated lamproitic melts at 1000 °C and 300 MPa over a broad range of oxygen fugacities [log(fO2)=FMQ, FMQ+1.2, FMQ+3; FMQ = fayalite-magnetite-quartz solid buffer]. The data are used to test the hypothesis that S oxidation states other than S6+ may substitute into the apatite structure. Peak energies corresponding to sulfate S6+ (∼2482 eV), sulfite S4+ (∼2478 eV), and sulfide S2- (∼2470 eV) were observed in apatite, and the integrated areas of the different sulfur peaks correspond to changes in fO2 and bulk S content. Here, multiple tests confirmed that the S oxidation state in apatite remains constant when exposed to the synchrotron beam, at least for up to 1 h exposure (i.e., no irradiation damages). To our knowledge, this observation makes apatite the first mineral to incorporate reduced (S2-), intermediate (S4+), and oxidized (S6+) S in variable proportions as a function of the prevailing fO2 of the system. Apatites crystallized under oxidizing conditions (FMQ+1.2 and FMQ+3), where the S6+/STotal peak area ratio in the coexisting glass (i.e., quenched melt) is ∼1, are dominated by S6+ with a small contribution of S4+, whereas apatites crystallizing at reduced conditions (FMQ) contain predominantly S2-, lesser amounts of S6+, and possibly traces of S4+. A sulfur oxidation state vs. S concentration analytical line transect across hydrothermally altered apatite from the Mina Carmen iron oxide-apatite (IOA) deposit (Chile) demonstrates that apatite can become enriched in S4+ relative to S6+, indicating metasomatic overprinting via a SO2-bearing fluid or vapor phase. This XANES study demonstrates that as the fO2 increases from FQM to FMQ+1.2 to FMQ+3 the oxidation state of S in igneous apatite changes from S2- dominant to S6+ > S4+ to S6+ >> S4+ Furthermore, these results suggest that spectroscopic studies of igneous apatite have potential to trace the oxidation state of S in magmas. The presence of three S oxidations states in apatite may in part explain the non-Henrian partitioning of S between apatite and melt. Our study reveals the potential to use the S signature of apatite to elucidate both oxygen and sulfur fugacity in magmatic and hydrothermal systems.

Crystal chemical algorithms were used to estimate the chemical composition of selected mineral phases observed with the CheMin X-ray diffractometer onboard the NASA Curiosity rover in Gale crater, Mars. The sampled materials include two wind-blown soils, Rocknest and Gobabeb, six mudstones in the Yellowknife Bay formation (John Klein and Cumberland) and the Murray formation (Confidence Hills, Mojave2, and Telegraph Peak), as well as five sandstones, Windjana and the samples of the unaltered Stimson formation (Big Sky and Okoruso) and the altered Stimson formation (Greenhorn and Lubango). The major mineral phases observed with the CheMin instrument in the Gale crater include plagioclase, sanidine, P21/c and C2/c clinopyroxene, orthopyroxene, olivine, spinel, and alunite-jarosite group minerals. The plagioclase analyzed with CheMin has an overall estimated average of An40(11) with a range of An30(8) to An63(6). The soil samples, Rocknest and Gobabeb, have an average of An56(8) while the Murray, Yellowknife Bay, unaltered Stimson, and altered Stimson formations have averages of An38(2), An37(5), An45(7), and An35(6), respectively. Alkali feldspar, specifically sanidine, average composition is Or74(17) with fully disordered Al/Si. Sanidine is most abundant in the Wind-jana sample (∼26 wt% of the crystalline material) and is fully disordered with a composition of Or87(5). The P21/c clinopyroxene pigeonite observed in Gale crater has a broad compositional range {[Mg0.95(12)-1.54(17)Fe0.18(17)-1.03(9)Ca0.00-0.28(6)]Σ2Si2O6} with an overall average of Mg1.18(19)Fe0.72(7)Ca0.10(9)Si2O6. The soils have the lowest Mg and highest Fe compositions [Mg0.95(5)Fe1.02(7)Ca0.03(4)Si2O6] of all of the Gale samples. Of the remaining samples, those of the Stimson formation exhibit the highest Mg and lowest Fe [average = Mg1.45(7)Fe0.35(13)Ca0.19(6)Si2O6]. Augite, C2/c clinopyroxene, is detected in just three samples, the soil samples [average = Mg0.92(5)Ca0.72(2)Fe0.36(5)Si2O6] and Windjana (Mg1.03(7)Ca0.75(4)Fe0.21(9)Si2O6). Orthopyroxene was not detected in the soil samples and has an overall average composition of Mg0.79(6)Fe1.20(6)Ca0.01(2)Si2O6 and a range of [Mg0.69(7)-0.86(20)Fe1.14(20)-1.31(7)Ca0.00-0.04(4)]Σ2Si2O6, with Big Sky exhibiting the lowest Mg content [Mg0.69(7)Fe1.31(7)Si2O6] and Okoruso exhibiting the highest [Mg0.86(20)Fe1.14(20)Si2O6]. Appreciable olivine was observed in only three of the Gale crater samples, the soils and Windjana. Assuming no Mn or Ca, the olivine has an average composition of Mg1.19(12)Fe0.81(12)SiO4 with a range of 1.08(3) to 1.45(7) Mg apfu. The soil samples [average = Mg1.11(4)Fe0.89SiO4] are significantly less magnesian than Windjana [Mg1.35(7)Fe0.65(7)SiO4]. We assume magnetite (Fe3O4) is cation-deficient (Fe3-x∎xO4) in Gale crater samples [average = Fe2.83(5)∎0.14O4; range 2.75(5) to 2.90(5) Fe apfu], but we also report other plausible cation substitutions such as Al, Mg, and Cr that would yield equivalent unit-cell parameters. Assuming cation-deficient magnetite, the Murray formation [average = Fe2.77(2)∎0.23O4] is noticeably more cation-deficient than the other Gale samples analyzed by CheMin. Note that despite the presence of Ti-rich magnetite in martian meteorites, the unit-cell parameters of Gale magnetite do not permit significant Ti substitution. Abundant jarosite is found in only one sample, Mojave2; its estimated composition is (K0.51(12)Na0.49)(Fe2.68(7)Al0.32)(SO4)2(OH)6. In addition to providing composition and abundances of the crystalline phases, we calculate the lower limit of the abundance of X-ray amorphous material and the composition thereof for each of the samples analyzed with CheMin. Each of the CheMin samples had a significant proportion of amorphous SiO2, except Windjana that has 3.6 wt% SiO2. Excluding Windjana, the amorphous materials have an SiO2 range of 24.1 to 75.9 wt% and an average of 47.6 wt%. Windjana has the highest FeOT (total Fe content calculated as FeO) at 43.1 wt%, but most of the CheMin samples also contain appreciable Fe, with an average of 16.8 wt%. With the exception of the altered Stimson formation samples, Greenhorn and Lubango, the majority of the observed SO3 is concentrated in the amorphous component (average = 11.6 wt%). Furthermore, we provide average amorphous-component compositions for the soils and the Mount Sharp group formations, as well as the limiting element for each CheMin sample.

Granite-related wolframite-quartz veins are the world's most important tungsten mineralization and production resource. Recent progress in revealing their hydrothermal processes has been greatly facilitated by the use of infrared microscopy and laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) analysis of both quartz- and wolframite-hosted fluid inclusions. However, owing to the paucity of detailed petrography, previous fluid inclusion studies on coexisting wolframite and quartz are associated with a certain degree of ambiguity. To better understand the fluid processes forming these two minerals, free-grown crystals of intergrown wolframite and quartz from the giant Yaogangxian W deposit in South China were studied using integrated in situ analytical methods including cathodoluminescence (CL) imaging, infrared microthermometry, Raman microspectroscopy, and fluid inclusion LA-ICP-MS analysis. Detailed crystal-scale petrography with critical help from CL imaging shows repetition of quartz, wolframite, and muscovite in the depositional sequence, which comprises a paragenesis far more complex than previous comparable studies. The reconstruction of fluid history in coexisting wolframite and quartz recognizes at least four successive fluid inclusion generations, two of which were entrapped concurrently with wolframite deposition. Fluctuations of fluid temperature and salinity during precipitation of coexisting wolframite and quartz are reflected by our microthermometry results, according to which wolframite-hosted fluid inclusions do not display higher homogenization temperature or salinity than those in quartz. However, LA-ICP-MS analysis shows that both primary fluid inclusions in wolframite and quartz-hosted fluid inclusions associated intimately with wolframite deposition are characterized by strong enrichment in Sr and depletion in B and As compared to quartz-hosted fluid inclusions that are not associated with wolframite deposition. The chemical similarity between the two fluid inclusion generations associated with wolframite deposition implies episodic tungsten mineralization derived from fluids exhibiting distinct chemical signatures. Multiple chemical criteria including incompatible elements and Br/Cl ratios of fluid inclusions in both minerals suggest a magmatic-sourced fluid with the possible addition of sedimentary and meteoric water. Combined with microthermometry and Raman results, fluid chemical evolution in terms of B, As, S, Sr, W, Mn, Fe, and carbonic volatiles collectively imply fluid phase separation and mixing with sedimentary fluid may have played important roles in wolframite deposition, whereas fluid cooling and addition of Fe and Mn do not appear to be the major driving factor. This study also shows that fluid inclusions in both wolframite and coexisting quartz may contain a substantial amount of carbonic volatiles (CO2 ± CH4) and H3BO3. Ignoring the occurrence of these components can result in significant overestimation of apparent salinity and miscalculation of LA-ICP-MS elemental concentrations. We suggest that these effects should be considered critically to avoid misinterpretation of fluid inclusion data, especially for granite-related tungsten-tin deposits.

Elastic geobarometry for host-inclusion systems can provide new constraints to assess the pressure and temperature conditions attained during metamorphism. Current experimental approaches and theory are developed only for crystals immersed in a hydrostatic stress field, whereas inclusions experience deviatoric stress. We have developed a method to determine the strains in quartz inclusions from Raman spectroscopy using the concept of the phonon-mode Gruneisen tensor. We used ab initio Hartree-Fock/Density Functional Theory to calculate the wavenumbers of the Raman-active modes as a function of different strain conditions. Least-squares fits of the phonon-wavenumber shifts against strains have been used to obtain the components of the mode Gruneisen tensor of quartz (γ1m and γ3m) that can be used to calculate the strains in inclusions directly from the measured Raman shifts. The concept is demonstrated with the example of a natural quartz inclusion in eclogitic garnet from Mir kimberlite and has been validated against direct X-ray diffraction measurement of the strains in the same inclusion.

The geologic carbon cycle plays a fundamental role in controlling Earth's climate and habitability. For billions of years, stabilizing feedbacks inherent in the cycle have maintained a surface environment that could sustain life. Carbonation/decarbonation reactions are the primary mechanisms for transferring carbon between the solid Earth and the ocean-atmosphere system. These processes can be broadly represented by the reaction: CaSiO3(wollastonite) + CO2(gas)⇌CaCO3(calcite) + SiO2(quartz). This class of reactions is therefore critical to Earth's past and future habitability. Here, we summarize their significance as part of the Deep Carbon Observatory's \"Earth in Five Reactions\" project. In the forward direction, carbonation reactions like the one above describe silicate weathering and carbonate formation on Earth's surface. Recent work aims to resolve the balance between silicate weathering in terrestrial and marine settings both in the modern Earth system and through Earth's history. Rocks may also undergo carbonation reactions at high temperatures in the ultramafic mantle wedge of a subduction zone or during retrograde regional metamorphism. In the reverse direction, the reaction above represents various prograde metamorphic decarbonation processes that can occur in continental collisions, rift zones, subduction zones, and in aureoles around magmatic systems. We summarize the fluxes and uncertainties of major carbonation/decarbonation reactions and review the key feedback mechanisms that are likely to have stabilized atmospheric CO2 levels. Future work on planetary habitability and Earth's past and future climate will rely on an enhanced understanding of the long-term carbon cycle.