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result(s) for
"glycorandomization"
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Chemoselective Aza-Michael Addition of Enolizable Heterocyclic Imine-Thiols to Levoglucosenone
by
Witczak, Zbigniew J.
,
Mahato, Rubi
,
Bielski, Roman
in
aza-Michael addition
,
Communication
,
Crystals
2026
Heterocyclic sulfur and nitrogen containing compounds capable of forming an equilibrium: thiol/imine = thione/amine (N=C-S-H ⇌ H-N-C=S) were reacted with levoglucosenone (LG) in the presence of triethylamine. Unexpectedly, the only isolated products were the result of the aza-Michael addition. No S-adducts were detected. All products were crystalline with good to excellent yields. The structure of products was determined using NMR, MS, and single-crystal X-ray analysis.
Journal Article
Sweet antibiotics - the role of glycosidic residues in antibiotic and antitumor activity and their randomization
by
Křen, Vladimír
,
Řezanka, Tomáš
in
Aglycones
,
Animals
,
Anti-Bacterial Agents - chemical synthesis
2008
A large number of antibiotics are glycosides. In numerous cases the glycosidic residues are crucial to their activity; sometimes, glycosylation only improves their pharmacokinetic parameters. Recent developments in molecular glycobiology have improved our understanding of aglycone vs. glycoside activities and made it possible to develop new, more active or more effective glycodrugs based on these findings - a very illustrative recent example is vancomycin. The majority of attention has been devoted to glycosidic antibiotics including their past, present, and probably future position in antimicrobial therapy. The role of the glycosidic residue in the biological activity of glycosidic antibiotics, and the attendant targeting and antibiotic selectivity mediated by glycone and aglycone in antibiotics some antitumor agents is discussed here in detail. Chemical and enzymatic modifications of aglycones in antibiotics, including their synthesis, are demonstrated on various examples, with particular emphasis on the role of specific and mutant glycosyltransferases and glycorandomization in the preparation of these compounds. The last section of this review describes and explains the interactions of the glycone moiety of the antibiotics with DNA and especially the design and structure-activity relationship of glycosidic antibiotics, including their classification based on their aglycone and glycosidic moiety. The new enzymatic methodology 'glycorandomization' enabled the preparation of glycoside libraries and opened up new ways to prepare optimized or entirely novel glycoside antibiotics.
Journal Article
Creation of the First Anomeric D/L-Sugar Kinase by Means of Directed Evolution
2003
Chemoenzymatic routes toward complex glycoconjugates often depend on the availability of sugar-1-phosphates. Yet the chemical synthesis of these vital components is often tedious, whereas natural enzymes capable of anomeric phosphorylation are known to be specific for one or only a few monosaccharides. Herein we describe the application of directed evolution and a high-throughput multisugar colorimetric screen to enhance the catalytic capabilities of the Escherichia coli galactokinase GalK. From this approach, one particular GalK mutant carrying a single amino acid exchange (Y371H) displayed a surprisingly substantial degree of kinase activity toward sugars as diverse as D-galacturonic acid, D-talose, L-altrose, and L-glucose, all of which failed as wild-type GalK substrates. Furthermore, this mutant provides enhanced turnover of the small pool of sugars converted by the wild-type enzyme. Comparison of this mutation to the recently solved structure of Lactococcus lactis GalK begins to provide a blueprint for further engineering of this vital class of enzyme. In addition, the rapid access to such promiscuous sugar C-1 kinases will significantly enhance accessibility to natural and unnatural sugar-1-phosphates and thereby impact both in vitro and in vivo glycosylation methodologies, such as natural product glycorandomization.
Journal Article
Expanding Pyrimidine Diphosphosugar Libraries Via Structure-Based Nucleotidylyltransferase Engineering
by
Thorson, Jon S.
,
Barton, William A.
,
Nikolov, Dimitar B.
in
Active sites
,
Amino Acid Substitution
,
Amino acids
2002
In vitro \"glycorandomization\" is a chemoenzymatic approach for generating diverse libraries of glycosylated biomolecules based on natural product scaffolds. This technology makes use of engineered variants of specific enzymes affecting metabolite glycosylation, particularly nucleotidylyltransferases and glycosyltransferases. To expand the repertoire of UDP/dTDP sugars readily available for glycorandomization, we now report a structure-based engineering approach to increase the diversity of α-D-hexopyranosyl phosphates accepted by Salmonella enterica LT2 α-D-glucopyranosyl phosphate thymidylyltransferase (Ep). This article highlights the design rationale, determined substrate specificity, and structural elucidation of three \"designed\" mutations, illustrating both the success and unexpected outcomes from this type of approach. In addition, a single amino acid substitution in the substrate-binding pocket (L89T) was found to significantly increase the set of α-D-hexopyranosyl phosphates accepted by Epto include α-D-allo-, α-D-altro-, and α-D-talopyranosyl phosphate. In aggregate, our results provide valuable blueprints for altering nucleotidylyltransferase specificity by design, which is the first step toward in vitro glycorandomization.
Journal Article
Harnessing Sugar Biosynthesis and Glycosylation to Redesign Natural Products and to Increase Structural Diversity
by
Méndez, Carmen
,
Salas, José A.
,
Olano, Carlos
in
deoxysugar biosynthesis
,
deoxysugar modification
,
deoxysugar transfer
2014
Natural products are frequently glycosylated with saccharide chains of different length. These saccharide moieties contribute to create structural biodiversity and participate in specific interactions with the biological target that determine the activity of the natural product. Combinatorial biosynthesis and glycorandomization approaches are being used to generate derivatives with different sugars in their architecture. These approaches take advantage of substrate flexibility exhibited by glycosyltransferases involved in the biosynthesis of natural products, mainly regarding the sugar donor but also with respect to the aglycone acceptor. Therefore, the possibility exists of redesigning the glycosylation pattern of natural products, thus increasing structural diversity and improving or modifying biological activity.
Book Chapter