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Marine historical ecology provides a means to establish baselines to inform current fisheries management. Groupers (Epinephelidae) are key species for fisheries in the Mediterranean, which have been heavily overfished. Species abundance and distribution prior to the 20th century in the Mediterranean remains poorly known. To reconstruct the past biogeography of Mediterranean groupers, we investigated whether Zooarchaeology by Mass Spectrometry (ZooMS) can be used for identifying intra‐genus grouper bones to species level. We discovered 22 novel, species‐specific ZooMS biomarkers for groupers. Applying these biomarkers to Kinet Höyük, a Mediterranean archaeological site, demonstrated 4000 years of regional Epinephelus aeneus dominance and resiliency through millennia of fishing pressures, habitat degradation and climatic changes. Combining ZooMS identifications with catch size reconstructions revealed the Epinephelus aeneus capacity for growing 30 cm larger than hitherto documented, revising the maximum Total Length from 120 to 150 cm. Our results provide ecological baselines for a key Mediterranean fishery which could be leveraged to define and assess conservation targets.

Following decades of declines, populations of large fish recently started to increase in the North Sea, presumably due to reduced fishing pressure. However, population recovery may be too readily claimed, since standardised sampling of fish stocks commenced only in the 1970s, well after many species had already collapsed. A true recovery must be seen from a long-term perspective. The critically endangered common skate (Dipturus batis, Rajidae) species complex is an example of a large-bodied fish that mostly disappeared before standardised monitoring took place. Here, we put the recent increase in population size into a 120-year perspective, throughout three geographical divisions in the North Sea. We analysed a large range of mostly undisclosed historical data and contemporary sources. A reconstruction of Dutch commercial landings data confirms that the species used to be very abundant between 1901 and 1920, and shows how it steadily declined from 1920 onwards until it got extirpated around 1970. Based on a quantitative analysis of standardised catch numbers from fishery-independent surveys time, we conclude that the current abundance of the species is still below historical baselines and represents a local recovery at most. We further demonstrate a prominent and consistent pattern in size distribution, with larger (mature) individuals only occurring in the northern North Sea. A large dataset on historical stomach contents from the central North Sea confirmed the diet of young common skate, which consisted predominantly of shrimps. Our review exemplifies the importance of marine historical ecology to deduce the natural richness of the North Sea.

Forests cover approximately one-third of Central Europe. Oak (Quercus) and European beech (Fagus sylvatica,) are considered the natural dominants at low and middle elevations, respectively. Many coniferous forests (especially of Picea abies) occur primarily at midelevations, but these are thought to have resulted from forestry plantations planted over the past 200 years. Nature conservation and forestry policy seek to promote broadleaved trees over conifers. However, there are discrepancies between conservation guidelines (included in Natura 2000) and historical and palaeoecological data with regard to the distribution of conifers. Our aim was to bring new evidence to the debate on the conservation of conifers versus broadleaved trees at midelevations in Central Europe. We created a vegetation and land-cover model based on pollen data for a highland area of 11,300 km² in the Czech Republic and assessed tree species composition in the forests before the onset of modern forestry based on 18th-century archival sources. Conifers dominated the study region throughout the entire Holocene (approximately 40-60% of the area). Broadleaved trees were present in a much smaller area than envisaged by current ideas of natural vegetation. Rather than casting doubt on the principles of Central European nature conservation in general, our results highlight the necessity of detailed regional investigations and the importance of historical data in challenging established notions on the natural distribution of tree species. Aproximadamente un tercio de Europa Central esta cubierto por bosques. Encinos (Quercus) y hayas (Fagus sylvatica) son considerados los dominantes naturales en elevaciones bajas y medias, respectivamente. Muchos bosques de coniferas (especialmente Picea abies) ocurren como vegetación primaria en elevaciones medias, pero se piensa que resultaron de plantaciones forestales en los últimos 200 años. Las políticas de conservación de la naturaleza y forestales buscan promover árboles de hoja en lugar de coníferas. Sin embargo, hay discrepancias entre las directrices de conservación (incluidas en Natura 2000) y los datos históricos y paleoecológicos en relación con la distribución de coniferas. Nuestro objetivo fue aportar evidencias nuevas al debate sobre la conservación de coniferas versus árboles de hoja ancha en elevaciones medias en Europa Central. Creamos un modelo de vegetación y cobertura de suelo basado en datos de polen para tierras elevadas con superficie de 11,300 km² en la República Checa y evaluamos la composición de especies de árboles antes del desarrollo forestal moderno con base en fuentes en archivos del siglo 18. La zona de estudio (aproximadamente 40-60% de la superficie) fue dominada por coníferas durante el Holoceno. Árboles de hoja ancha estuvieron presentes en una superficie mucho menor que la considerada por las ideas actuales sobre la vegetación natural. En lugar de plantear dudas sobre los principios de la conservación de la naturaleza en general en Europa Central, nuestros resultados resaltan la necesidad de realizar investigaciones regionales detalladas así como la importancia de los datos históricos para cuestionar nociones establecidas sobre la distribución natural de especies de árboles.

Historical archives hold untapped potential for understanding long-term biodiversity change. This study introduces computational approaches to historical ecology, combining archival research, text analysis, and spatial mapping to reconstruct past biodiversity patterns. Using the 1845 Bavarian Animal Observation Dataset (AOD1845), a comprehensive survey of vertebrate species across 119 districts, we transform 5400 prose records into structured ecological data. Our analyses reveal how species distributions, habitat associations, and human–wildlife interactions were shaped by land use and environmental pressures in pre-industrial Bavaria. Beyond documenting ecological baselines, the study captures early perceptions of habitat loss and species decline. We emphasise the critical role of historical expertise in interpreting archival sources and avoiding anachronisms when integrating historical data with modern biodiversity frameworks. By bridging the humanities and environmental sciences, this work shows how digitised archives and computational methods can open new frontiers for conservation science, restoration ecology, and Anthropocene studies. The findings advocate for the systematic mobilisation of historical datasets to better understand biodiversity change over time.

The deep-time dynamics of coupled socio-ecological systems at different spatial scales is viewed as a key framework to understand trends and mechanisms that have led to the Anthropocene. By integrating archeological and paleoenvironmental records, we test the hypothesis that Chilean societies progressively escalated their capacity to shape national biophysical systems as socio-cultural complexity and pressures on natural resources increased over the last three millennia. We demonstrate that Pre-Columbian societies intentionally transformed Chile’s northern and central regions by continuously adjusting socio-cultural practices and/or incorporating technologies that guaranteed resource access and social wealth. The fact that past human activities led to cumulative impacts on diverse biophysical processes, not only contradicts the notion of pristine pre-Industrial Revolution landscapes, but suggests that the Anthropocene derives from long-term processes that have operated uninterruptedly since Pre-Columbian times. Moreover, our synthesis suggests that most of present-day symptoms that describe the Anthropocene are rooted in pre-Columbian processes that scaled up in intensity over the last 3000 years, accelerating after the Spanish colonization and, more intensely, in recent decades. The most striking trend is the observed coevolution between the intensity of metallurgy and heavy-metal anthropogenic emissions. This entails that the Anthropocene cannot be viewed as a universal imprint of human actions that has arisen as an exclusive consequence of modern industrial societies. In the Chilean case, this phenomenon is intrinsically tied to historically and geographically diverse configurations in society-environment feedback relationships. Taken collectively with other case studies, the patterns revealed here could contribute to the discussion about how the Anthropocene is defined globally, in terms of chronology, stratigraphic markers and attributes. Furthermore, this deep-time narrative can potentially become a science-based instrument to shape better-informed discourses about the socio-environmental history in Chile. More importantly, however, this research provides crucial “baselines” to delineate safe operating spaces for future socio-ecological systems.

Norwegian wild reindeer Rangifer tarandus tarandus are divided into 23 virtually isolated populations, primarily due to the abandonment of traditional migration and movement corridors caused by the development of infrastructures. By conducting a nation-wide, interdisciplinary pre-post study on a temporal scale spanning centuries, we modelled current reindeer movements with respect to archaeological findings to quantify long-term changes in area use related to anthropogenic disturbance. The location of 3,113 pitfall traps and hunting blinds, built 600–2000 years ago and used until 350–400 years ago, testified the location of traditional movement corridors. Current movement routes were delineated using Brownian Bridge Movement Models based on 147 reindeer GPS-monitored during 10 years. Using Path Analysis we quantified direct, indirect and total effects of different infrastructures within multiple scales (1, 5, and 10 km-radius buffers) on the current probability of use of ancient movement corridors. Tourist cabins and roads had the strongest long-term direct effects at most scales: 1 tourist cabin and 1 km road within a 1 km-radius buffer would lead, respectively, to complete area abandonment, and to a 46 % decrease in the probability of use. Power lines and private cabins had significant indirect effects on area use through their effect on roads, while hiking trails and, in particular, hydroelectric dams had highly variable effects, not significant at a nation-wide scale. Finally, we provide a flexible tool to estimate the potential long-term direct and cumulative effects of different types of infrastructures at the desired spatial scale to be used for the development of future sustainable land management plans.

Climate change is driving the tropicalization of temperate ecosystems by shifting the range edges of numerous species poleward. Over the past few decades, mangroves have rapidly displaced salt marshes near multiple poleward mangrove range limits, including in northeast Florida. It is uncertain whether such mangrove expansions are due to anthropogenic climate change or natural climate variability. We combined historical accounts from books, personal journals, scientific articles, logbooks, photographs, and maps with climate data to show that the current ecotone between mangroves and salt marshes in northeast Florida has shifted between mangrove and salt marsh dominance at least 6 times between the late 1700s and 2017 due to decadal-scale fluctuations in the frequency and intensity of extreme cold events. Model projections of daily minimum temperature from 2000 through 2100 indicate an increase in annual minimum temperature by 0.5 °C/decade. Thus, although recent mangrove range expansion should indeed be placed into a broader historical context of an oscillating system, climate projections suggest that the recent trend may represent a more permanent regime shift due to the effects of climate change.

Historical ecology has revolutionized our understanding of fisheries and cultural landscapes, demonstrating the value of historical data for evaluating the past, present, and future of Earth’s ecosystems. Despite several important studies, Indigenous fisheries generally receive less attention from scholars and managers than the 17th–20th century capitalist commercial fisheries that decimated many keystone species, including oysters. We investigate Indigenous oyster harvest through time in North America and Australia, placing these data in the context of sea level histories and historical catch records. Indigenous oyster fisheries were pervasive across space and through time, persisting for 5000–10,000 years or more. Oysters were likely managed and sometimes “farmed,” and are woven into broader cultural, ritual, and social traditions. Effective stewardship of oyster reefs and other marine fisheries around the world must center Indigenous histories and include Indigenous community members to co-develop more inclusive, just, and successful strategies for restoration, harvest, and management. ‘Commercial fisheries have decimated keystone species, including oysters in the past 200 years. Here, the authors examine how Indigenous oyster harvest in North America and Australia was managed across 10,000 years, advocating for effective future stewardship of oyster reefs by centering Indigenous peoples.’

Marine heatwaves threaten the persistence of kelp forests globally. However, the observed responses of kelp forests to these events have been highly variable on local scales. Here, we synthesize distribution data from an environmentally diverse region to examine spatial patterns of canopy kelp persistence through an unprecedented marine heatwave. We show that, although often overlooked, temperature variation occurring at fine spatial scales (i.e., a few kilometers or less) can be a critical driver of kelp forest persistence during these events. Specifically, though kelp forests nearly all persisted toward the cool outer coast, inshore areas were >3°C warmer at the surface and experienced extensive kelp loss. Although temperatures remained cool at depths below the thermocline, kelp persistence in these thermal refugia was strongly constrained by biotic interactions, specifically urchin populations that increased during the heatwave and drove transitions to urchin barrens in deeper rocky habitat. Urchins were, however, largely absent from mixed sand and cobble benthos, leading to an unexpected association between bottom substrate and kelp forest persistence at inshore sites with warm surface waters. Our findings demonstrate both that warm microclimates increase the risk of habitat loss during marine heatwaves and that biotic interactions modified by these events will modulate the capacity of cool microclimates to serve as thermal refugia.

Alexander von Humboldt’s Tableau Physique (1807) has been one of the most influential diagrams in the history of environmental sciences. In particular, detailed observations of the altitudinal distribution of plant species in the equatorial Andes, depicted on a cross-section of Mt. Chimborazo, allowed Humboldt to establish the concept of vegetation belt, thereby laying the foundations of biogeography. Surprisingly, Humboldt’s original data have never been critically revisited, probably due to the difficulty of gathering and interpreting dispersed archives. By unearthing and analyzing overlooked historical documents, we show that the top section of the Tableau Physique, above the tree line, is an intuitive construct based on unverified and therefore partly false field data that Humboldt constantly tried to revise in subsequent publications. This finding has implications for the documentation of climate change effects in the tropical Andes. We found that Humboldt’s primary plant data above tree line were mostly collected on Mt. Antisana, not Chimborazo, which allows a comparison with current records. Our resurvey at Mt. Antisana revealed a 215- to 266-m altitudinal shift over 215 y. This estimate is about twice lower than previous estimates for the region but is consistent with the 10- to 12-m/decade upslope range shift observed worldwide. Our results show the cautious approach needed to interpret historical data and to use them as a resource for documenting environmental changes. They also profoundly renew our understanding of Humboldt’s scientific thinking, methods, and modern relevance.