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Microplastics may enter the soil in a wide range of shapes and polymers. However, little is known about the effects that microplastics of different shapes, polymers, and concentration may have on soil properties and plant performance. To address this, we selected 12 microplastics representing different shapes (fibers, films, foams, and fragments) and polymers, and mixed them each with soil at a concentration of 0.1, 0.2, 0.3, and 0.4%. A phytometer ( Daucus carota ) grew in each pot during 4 weeks. Shoot, root mass, soil aggregation, and microbial activity were measured. All shapes increased plant biomass. Shoot mass increased by ∼27% with fibers, ∼60% with films, ∼45% with foams, and by ∼54% with fragments, as fibers hold water in the soil for longer, films decrease soil bulk density, and foams and fragments can increase soil aeration and macroporosity, which overall promote plant performance. By contrast, all shapes decreased soil aggregation by ∼25% as microplastics may introduce fracture points into aggregates and due to potential negative effects on soil biota. The latter may also explain the decrease in microbial activity with, for example, polyethylene films. Our findings show that shape, polymer type, and concentration are key properties when studying microplastic effects on terrestrial systems.

As root exudation may be altered by drought stress, we investigated if biochar amendment could moderate these effects. In a pot experiment with maize, treatments amended with straw or wood biochar were exposed to different irrigation regimes: well-watered (irrigated to 90% of water holding capacity (WHC)), drought (no irrigation for 4 days), and recovery (irrigated to 90% of WHC for 4 days after drought). Photosynthesis was measured during plant growth. At harvest, the leaf water potential (LWP), plant biomass, rhizosphere and bulk soil NH4+ content, pH, multiple substrate-induced respiration (MSIR), and rhizosphere content of selected primary metabolites (as an indication of root exudation) were determined. While the plant biomass was unaffected by biochar amendment, biochar had positive effects on the LWP and photosynthetic parameters in the initial drought and recovery phases. Furthermore, soil pH and NH4+ content were affected by biochar and the C-substrate utilization (MSIR) increased in the biochar treatments, independently of irrigation. Both biochars significantly altered the rhizosphere content of primary metabolites, especially under full irrigation and drought, and it is suggested that direct and indirect effects of biochar application on soil properties are the cause of these changes. Biochar specifically increased the content of organic acids, and drought even had an additive effect on the content of succinic acid in the wood biochar treatment.

[This corrects the article DOI: 10.3389/fpls.2021.616645.].[This corrects the article DOI: 10.3389/fpls.2021.616645.].

Studies of biodiversity–ecosystem function in treed ecosystems have generally focused on aboveground functions. This study investigates intertrophic links between tree diversity and soil microbial community function and composition. We examined how microbial communities in surface mineral soil responded to experimental gradients of tree species richness (SR), functional diversity (FD), community‐weighted mean trait value (CWM), and tree identity. The site was a 4‐year‐old common garden experiment near Montreal, Canada, consisting of deciduous and evergreen tree species mixtures. Microbial community composition, community‐level physiological profiles, and respiration were evaluated using phospholipid fatty acid (PLFA) analysis and the MicroResp™ system, respectively. The relationship between tree species richness and glucose‐induced respiration (GIR), basal respiration (BR), metabolic quotient (qCO2) followed a positive but saturating shape. Microbial communities associated with species mixtures were more active (basal respiration [BR]), with higher biomass (glucose‐induced respiration [GIR]), and used a greater number of carbon sources than monocultures. Communities associated with deciduous tree species used a greater number of carbon sources than those associated with evergreen species, suggesting a greater soil carbon storage capacity. There were no differences in microbial composition (PLFA) between monocultures and SR mixtures. The FD and the CWM of several functional traits affected both BR and GIR. In general, the CWM of traits had stronger effects than did FD, suggesting that certain traits of dominant species have more effect on ecosystem processes than does FD. Both the functions of GIR and BR were positively related to aboveground tree community productivity. Both tree diversity (SR) and identity (species and functional identity—leaf habit) affected soil microbial community respiration, biomass, and composition. For the first time, we identified functional traits related to life‐history strategy, as well as root traits that influence another trophic level, soil microbial community function, via effects on BR and GIR. We demonstrate that both tree diversity and identity (species and functional identity—leaf habit) affected soil microbial community respiration, biomass, and composition. For the first time, we identified functional traits related to life‐history strategy, as well as root traits that influence another trophic level, soil microbial community function, via effects on BR and GIR.

Wetlands support unique biodiversity and play a key role in carbon cycles, but have dramatically declined in extent worldwide. Restoration is imperative yet often challenging to counteract loss of functions. Nature-based solutions such as the creation of novel ecosystems may be an alternative restoration approach. Targeted restoration strategies that account for the effects of vegetation on greenhouse gas (GHG) fluxes can accelerate the carbon sink function of such systems. We studied the relationships between vegetation, bare soil, and GHG dynamics on Marker Wadden in the Netherlands, a newly-created 700-ha freshwater wetland archipelago created for nature and recreation. We measured CO2 and CH4 fluxes, and soil microbial activity, in three-year-old soils on vegetated, with distinct species, and adjacent bare plots. Our results show that CH4 fluxes positively related to organic matter and interacted between organic matter and water table in bare soils, while CH4 fluxes positively related to plant cover in vegetated plots. Similarly, Reco in bare plots negatively related to water table, but only related positively to plant cover in vegetated plots, without differences between vegetation types. Soil microbial activity was higher in vegetated soils than bare ones, but was unaffected by substrate type. We conclude that GHG exchange of this newly-created wetland is controlled by water table and organic matter on bare soils, but the effect of vegetation is more important yet not species-specific. Our results highlight that the soil and its microbial community are still young and no functional differentiation has taken place yet and warrants longer-term monitoring.

The composition and diversity of forest soil microbial communities may be affected by the composition of plant communities and characteristics of soils. The objective of our study was to compare microbial properties of soils under various types of temperate forests. The samples were taken from soil A horizons under dry and mesic pine forests, acidophilus and fertile beech forests, hornbeam and oak dominated deciduous forests and ash dominated riparian forest. The samples were analysed for pH and the contents of organic C and total N, P, K, Ca, Mg and Mn. Microbial analyses included determination of microbial biomass, basal respiration, community level physiological profiles (CLPPs) measured by MicroResp™ method and phospholipid fatty acid (PLFA) profiles. The soil microbial communities under the pine forests were lower, less active and exhibited different CLPPs and PLFA profiles than those under deciduous forests. The PLFA profiles and CLPPs were correlated to each other revealing that the observed different metabolic abilities under the pine and deciduous forest types resulted from differences in taxonomic composition of soil microbial communities. The CLPPs and PLFA profiles depended on soil texture and the contents of C org , N t , and P t indicating that in the temperate forests the taxonomic and functional composition of soil microbial communities are shaped by both the soil properties and the vegetation. The functional diversity of soil microbial communities was not related to plant diversity indicating that in temperate forests the number of plant species has little effect on the ability of soil microorganisms to degrade different organic compounds.

PurposeThe aim of study was to revisit the assumptions of the MicroResp™ method and to determine the factors that control the substrate induced respiration (SIR) profiles. The following hypotheses were addressed: (1) SIR changes as a result of substrate form, incubation duration and soil type and (2) prolonged incubation of soils within the MicroResp™ assay results in shifts in the microbial community composition and consequently produces different SIR profiles.Materials and methodsTwo different soils (paddy soil and forest soil) were selected, and combined MicroResp™ and high-throughput sequencing were used to explore the relationships between SIR patterns and microbial diversity during 72 h of incubation in the two distinct soil types.Results and discussionThe results confirmed that SIR pattern of soil was sensitive to substrate, incubation duration, and soil type. However, both soils showed similar responses to most substrates applied. Principal coordinates analysis showed that the SIR patterns shifted over 72 h in both soils. The structure of the microbial community in soils, when treated with D-glucose, L-arginine, or protocatechuic acid, shifted significantly after only 6 h incubation.ConclusionsThe results indicated the SIR profiles were determined by microbial community characteristics, incubation duration, and soil type. Especially, the duration of incubation should be carefully considered when applying MicroResp™ to soil, in which prolonged incubation (> 6 h) might prompt biases to microbial structure through growth and community alteration.

Plant roots have a profound effect on soil microbial activity, particularly in the rhizosphere. Hence, it is important to understand the potential effects of genetically modified (GM) crops on soil microbial activity and related processes such as litter decomposition. In this study, we compared the effects of GM potato Modena on soil microbial activity and carbon (C) and nitrogen (N) mineralization to effects induced by Modena’s parental isoline (Karnico) and a conventional potato cultivar (Aventra). A field experiment was conducted at two sites to assess microbial catabolic diversity (using MicroRespᵀᴹ) in the rhizosphere and in bulk soil, during flowering and senescence of the potato plants. In a laboratory experiment with soil and potato litter from the field experiment, we investigated whether the cultivars had modified the activity of soil microbial communities to such an extent that this affected C and N mineralization. Results of the field experiment showed no GM-induced effects on microbial catabolic diversity, while effects of field site location and sampling date were significant. Multivariate analysis including plant traits and soil characteristics revealed that microbial catabolic activities in rhizosphere soil were strongly correlated with soil organic matter and tuber sucrose content, whereas in bulk soil, they were primarily correlated with soil moisture. In the laboratory experiment, we found that Modena induced a “home-field advantage” in N mineralization, yet this effect was inconsistent across locations and was also observed for other cultivars. Based on our data and results from previous studies, we conclude that the effects of GM cultivar Modena on soil microbial activity and litter decomposition fall within the normal range of effects found for conventional potato cultivars.

This study aimed at quantifying the consequences of reduced precipitation and plant diversity on soil microbial community functioning in a Mediterranean shrubland of southern France. Across a natural gradient of shrub species diversity, we established a total of 92 plots (4 x 4 m) with and without a moderate rain exclusion treatment of about 12 % of total precipitation. Shrub diversity included all possible combinations of the four dominant species (Cistus albidus, Quercus coccifera, Rosmarinus officinalis, and Ulex parviflorus). Respective leaf litter mixtures of these species combinations were exposed in all plots over 2 years. We quantified how litter species richness and the reduction in precipitation affected the soil microbial substrate utilization (measured by CO2 evolution using the MicroResp method) on soil samples collected underneath each individual litter mixture after 1 and 2 years of decomposition. Moderate precipitation reduction had a minor impact, but litter species richness and the dissimilarity in phenolic concentrations (estimated using Rao's quadratic entropy) showed a positive effect on the diversity of substrates metabolized by the microbial communities. Moreover, litter species richness increased soil microbial activity by increasing the catabolic diversity of the soil microbial community. These effects were mostly driven by the presence of Quercus and Ulex leaf litter, which at the same time reduced microbial metabolic dominance, while the presence of Rosmarinus had opposite effects. Our data suggest that plant species loss can have stronger effects on the functioning of soil microbial communities than moderate drought, with potentially important feedbacks on biogeochemical cycling in Mediterranean shrubland ecosystems.

Parasitic plants are important drivers of community and ecosystem properties. In this study, we identify different mechanisms by which mistletoe (Viscum album subsp. austriacum) can affect soil chemical and biological properties at different temporal stages of parasitism. We quantified the effect of parasitism on host growth and the number of frugivorous mutualists visiting the host canopy. Then we collected, identified, and weighed the organic matter input underneath tree canopies and analyzed its nutrient content. Simultaneously, we analyzed soil samples under tree canopies and examined the chemical properties, microbial abundance, and functional evenness of heterotrophic microbial communities. Mistletoe increased the amount, quality, and diversity of organic matter input beneath the host canopy, directly through its nutrient-rich litter and indirectly through a reduction in host litterfall and an increase in bird-derived debris. All these effects gave rise to enriched hotspots able to support larger and more functionally even soil microbial communities beneath parasitized hosts, the effects of which were accentuated after host death. We conclude that mistletoe, together with the biotic interactions it mediates, plays a key role in intensifying soil resource availability, regulating the functional evenness, abundance, and spatial distribution of soil microbial communities.