Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
LanguageLanguage
-
SubjectSubject
-
Item TypeItem Type
-
DisciplineDiscipline
-
YearFrom:-To:
-
More FiltersMore FiltersIs Peer Reviewed
Done
Filters
Reset
28
result(s) for
"multi-taxa"
Sort by:
Unraveling Biogeographic Boundaries Within the Sierra Madre Oriental, México: An Endemicity Analysis Using a Taxonomically Diverse Dataset
by
Hornung‐Leoni, Claudia T.
,
Castillo‐Cerón, Jesús M.
,
Goyenechea Mayer‐Goyenechea, Irene
in
areas of endemism
,
Biogeography
,
Datasets
2025
The Sierra Madre Oriental (SMO) is a significant mountain range and one of Mexico's 14 biogeographical provinces. Its delimitation has been debated. This study aims to analyze the distribution of plants, beetles, odonates, amphibians, reptiles, and mammals using an endemicity analysis to identify endemism areas and confirm the SMO's biogeographical units. Georeferenced data for 326 species distributed in the Sierra Madre Oriental were compiled using QGIS software, and an endemicity analysis (EA) was carried out with NDM‐VNDM to evaluate taxon distribution congruence in predefined grids. Different grid sizes and specific parameters were used to identify areas of endemism, with an Endemicity Index (EI) assigned to measure the consistency of these areas. Six main areas of endemism (EA) were identified: two in the northern region and four in the southern region of the SMO. These areas are supported by several taxa, except mammals, which did not significantly contribute to the identified AEs. The study suggests new boundaries within the SMO, establishing the Rio Verde as the natural barrier in the north rather than the Moctezuma River. The multi‐taxonomic analysis supports dividing the SMO into two subprovinces, proposing a new delimitation based on the distribution of species with different dispersal capacities. This new regionalization can be useful for prioritizing conservation areas and designing more effective strategies. Future research should include more distribution data of mammals and birds to strengthen these results and better define the subprovinces and biogeographical districts of the SMO. RESUMEN La Sierra Madre Oriental (SMO) es una importante cadena montañosa y una de las 14 provincias biogeográficas de México. Su delimitación ha sido objeto de debate. Este estudio tiene como objetivo analizar la distribución de plantas, escarabajos, odonatos, anfibios, reptiles y mamíferos utilizando un análisis de endemicidad para identificar áreas de endemismo y confirmar las unidades biogeográficas de la SMO. Se recopilaron datos georreferenciados para 326 especies distribuidas en la Sierra Madre Oriental utilizando el software QGIS, y se realizó un análisis de endemicidad (EA) con NDM‐VNDM para evaluar la congruencia de la distribución de los taxones en cuadrículas predefinidas. Se utilizaron diferentes tamaños de cuadrícula y parámetros específicos para identificar áreas de endemismo, asignando un Índice de Endemicidad (EI) para medir la consistencia de estas áreas. Se identificaron seis áreas principales de endemismo (AEs): dos en la región norte y cuatro en la región sur de la SMO. Estas áreas están respaldadas por varios taxones, excepto los mamíferos, que no contribuyeron significativamente a las AEs identificadas. El estudio sugiere nuevos límites dentro de la SMO, estableciendo el Río Verde como la barrera natural en el norte en lugar del Río Moctezuma. El análisis multi‐taxón apoya la división de la SMO en dos subprovincias, proponiendo una nueva delimitación basada en la distribución de especies con diferentes capacidades de dispersión. Esta nueva regionalización puede ser útil para priorizar áreas de conservación y diseñar estrategias más efectivas. Las investigaciones futuras deberían incluir más datos de distribución de mamíferos y aves para fortalecer estos resultados y definir mejor las subprovincias y distritos biogeográficos de la SMO. We provide boundaries of the Sierra Madre Oriental in Mexico through a multi‐taxa endemicity analysis.
Journal Article
Functional biogeography of marine vertebrates in Atlantic Ocean reefs
by
Luiz, Osmar J.
,
Bender, Mariana G.
,
Waechter, Luiza S.
in
Algae
,
Anthropogenic factors
,
Aquatic reptiles
2022
Aim Marine vertebrates play key functional roles on reef ecosystems. Despite their phylogenetic distance, different vertebrate lineages could play similar functions on reefs, which has been overlooked by current research on marine functional biogeography. We provide the first comprehensive assessment of the functional structure and inventory of ecosystem functions delivered by 224 vertebrates—marine mammals, sea turtles, sharks, rays and bony fish—in Atlantic Ocean reefs. Location Atlantic Ocean reefs. Methods We compiled six species‐level traits and investigated geographical patterns of functional richness (FRic), functional uniqueness (FUn) and specialization (FSpe) in 83 assemblages. Additionally, we simulate the effects of marine vertebrate species’ extinction on functional diversity metrics. Results Sharks, rays and bony fish species had the highest overlap in functional space (30.94%), while turtles overlapped mainly with bony fishes (1.76%). The functional structure of vertebrate assemblages is not homogeneous across the Atlantic. While functional richness peaks in the Caribbean (a “functional hotspot”), this region depicts low‐to‐intermediate functional uniqueness and functional specialization levels. Despite the large proportion of threatened top predator species (53.1%), mainly large‐bodied sharks, it is the loss of mesopredator species that will severely impact (up to 94% of functional loss) the functional space of vertebrate assemblages in Atlantic Ocean reefs. Main conclusions Our study reveals that functional richness patterns of vertebrate assemblages differ across Atlantic Ocean reefs. Despite the low values of functional uniqueness and specialization in some reef assemblages, reef functioning can still be compromised due to species’ extinctions. The impact of mesopredators’ loss over the functional structure of vertebrate assemblages is worrisome since this group holds a considerable proportion of threatened species (20.1%) and is next in line considering the anthropogenic impacts over high trophic level species.
Journal Article
Parallel, targeted analysis of environmental samples via high‐throughput quantitative PCR
by
Wilcox, Taylor M.
,
Engkjer, Cory
,
Eby, Lisa A.
in
Assaying
,
Cost analysis
,
Deoxyribonucleic acid
2020
When analyzing environmental samples for DNA from multiple taxa, researchers must usually decide between iterative analyses with single‐taxon assays—which are reliable and sensitive, but also laborious to apply—and approaches such as metabarcoding that can simultaneously target multiple species, but which are less sensitive for detection across taxa. Here, we test an intermediate approach that allows efficient, parallel assessment of taxon‐specific qPCR assays via high‐throughput quantitative PCR (HT‐qPCR). Based on an assessment of over 500 environmental samples, we found that sensitivity and specificity of our HT‐qPCR approach were similar (concordance 0.900–1.000) to values achieved through single‐species qPCR in six out of seven assays tested. Thus, HT‐qPCR may provide analyses of similar quality as single‐species qPCR analyses for environmental DNA, but at a lower cost per taxon. We see this approach as being a valuable addition to the eDNA sampling toolbox, particularly for situations where reliable inferences are needed for a defined suite of rare invasive or imperiled taxa. High‐throughput quantitative PCR (HT‐qPCR) enables highly parallel assessment of environmental samples across several to dozens of validated, taxon‐specific qPCR assays. Based on an assessment of >500 environmental samples, we found that sensitivity and specificity of our HT‐qPCR approach were similar to those achieved through single‐species qPCR, facilitating analyses of similar quality but at a lower cost per taxon.
Journal Article
A global meta-analyses of the response of multi-taxa diversity to grazing intensity in grasslands
2019
Livestock grazing is an important component and driver of biodiversity in grassland ecosystems. While numerous studies and a few meta-analyses had been conducted on the response of single taxon diversity to grazing in grasslands, a synthesis of how multi-taxa diversity is affected has been largely missing, especially reflecting its changes along a grazing intensity gradient. We performed a comprehensive meta-analyses of 116 published studies on the species richness (SR) and Shannon−Wiener index (H′) of plants, arthropods, and microbes to examine the response of biodiversity to grazing intensity in temperate grasslands globally. This quantitative assessment showed that the response of SR and H′ to grazing intensity agreed with the intermediate disturbance hypothesis in grasslands; SR and H′ increased with light and moderate grazing intensities, while they decreased at heavy intensity. In addition, plant SR increased markedly with light and moderate grazing and declined with heavy grazing intensity; however, H′ increased at light intensity and declined at moderate and heavy intensities. Moreover, the SR and H′ of microbes were enhanced at light and moderate grazing and were significantly reduced with heavy intensity. The SR and H′ of arthropods monotonously declined with increasing grazing intensity. Importantly, structural equation modeling showed that grazing resulted in enhanced plant SR mainly through its negative effects on plant biomass. Grazing had negative effects on plant coverage and arthropod abundance so that arthropod SR declined with increased grazing intensity. Moreover, increased grazing intensity caused an increase in soil pH, decrease in soil moisture, and then a decrease in microbe SR. Our findings confirm that different taxa exhibit diverse responses to changes in grazing intensity, and the way that grazing intensity affects diversity also varied with different taxa. We strongly recommend considering the requirements of multi-taxa diversity when applying grazing management and including arthropods and microbes in monitoring schemes.
Journal Article
Ecological networks act as extensions of protected areas for arthropod biodiversity conservation
2012
1. Landscape-scale ecological networks (ENs) are composed of linear corridors and are widely used to mitigate the adverse effects of intensive land use. One drawback with ENs used for conservation is that being small or linear they result in more edge relative to interior than would be the case naturally. Furthermore, there is little evidence to date that ENs do conserve indigenous biodiversity. 2. Here, we use five arthropod taxa at many sites over two geographical areas within South Africa with different elevations and grassland types to test the conservation value of remnant grassland ENs in a plantation forestry context. In particular, the relative value of arthropod biodiversity in exotic plantation blocks, their edges and the interiors of ENs among the plantations were compared with those in neighbouring protected areas (PAs). We use the effects that the plantation blocks have on the adjacent PAs as a reference for comparing the ENs among the plantations. Arthropods were selected to represent biodiversity, as they are small, diverse, habitat sensitive, resource dependent, ecologically important and can be sampled in large numbers. 3. In total, 10 422 individuals from 244 species were sampled. Importantly, there were no significant differences in species richness, abundance or assemblage composition between EN interior zones and PA interior zones in both geographical areas. 4. Using earlier established edge zones of 32 m, we found that plantation blocks had the lowest species richness and abundance compared with either grassland edge zones (< 32 m from the edge) or grassland interior zones (≥ 32 m from the edge). 5. Synthesis and applications. Ecological networks are established to conserve biodiversity in areas of intensive land use. Provided that ecological networks are wide enough (i.e. > 64 m) to overcome edge effects, they can support similar levels and quality of arthropod biodiversity as protected areas. Remnant grassland ecological networks in agroforestry can provide natural finger-like extensions from neighbouring protected areas and therefore have conservation value.
Journal Article
Spatial distribution of life‐history traits and their response to environmental gradients across multiple marine taxa
by
Reygondeau, Gabriel
,
Denderen, P. Daniel
,
Cheung, William W. L.
in
adults
,
Animal behavior
,
Biodiversity
2018
Trait‐based approaches enable comparison of community composition across multiple organism groups. Yet, little is known about the degree to which empirical trait responses found for one taxonomic group can be generalized across organisms. In this study, we investigated the spatial variability of marine community‐weighted mean traits and compared their environmental responses across multiple taxa and habitats, including pelagic zooplankton (copepods), demersal fish, and benthic infaunal invertebrates. We used extensive, spatially explicit datasets collected from scientific surveys in the North Sea and examined community composition of these groups using a trait‐based approach. In order to cover the key biological characteristics of an organism, we considered three life‐history traits (adult size, offspring size, and fecundity) and taxon‐specific feeding traits. While many of the traits co‐varied in space and notably demonstrated a south–north gradient, none of the traits showed a consistent spatial distribution across all groups. However, traits are often correlated as a result of trade‐offs. When studying spatial patterns of multiple traits variability in fish and copepods, we showed a high spatial correlation. This also applied to a lesser extent to fish and benthic infauna, whereas no correlation was found between benthic infauna and copepods. The result suggested a decoupling in the community traits between strictly benthic and strictly pelagic species. The strongest drivers of spatial variability for many community traits are the gradients in temperature seasonality, primary productivity, fishing effort, and depth. Spatial variability in benthic traits also co‐varied with descriptors of the seabed habitat. Overall, results showed that trait responses to environmental gradients cannot be generalized across organism groups, pointing toward potential complex responses of multi‐taxa communities to environmental changes and highlighting the need for cross‐habitat multi‐trait analyses to foresee how environmental change will affect community structure and biodiversity at large.
Journal Article
Exploring the mesofilter as a novel operational scale in conservation planning
by
Samways, Michael J.
,
Pryke, James S.
,
Crous, Casparus J.
in
abiotic surrogate
,
Animal, plant and microbial ecology
,
Applied ecology
2013
1. Increased emphasis is being placed on developing effective biodiversity conservation tools for practical conservation planning. The mesofilter is such a biodiversity planning tool, but has yet to be fully explored to appreciate its effectiveness. The key premise of the mesofilter is that ecosystems contain certain physical elements that are specifically associated with a diversity of species. Identifying such mesofilters could therefore complement existing conservation planning tools such as coarse and fine filters. 2. To explore the value of the mesofilter as an operational scale in conservation planning, we studied 18 remnant patches of endangered montane grassland in KwaZulu-Natal, South Africa, using the physical landscape feature of patch rockiness as an abiotic surrogate for biodiversity. The objective was to determine whether the mesofilter of rockiness can predict variation in species richness and composition for three dominant grassland taxa (plants, butterflies and grasshoppers) at the landscape scale. 3. Variable levels of rockiness had significant interactions with all three focal taxa. Higher species richness of all taxa was closely associated with higher levels of rockiness in a patch. The rocky mesofilter only predicted significant differences in species composition for butterflies. Elevation was also important, possibly another mesofilter for plants and grasshoppers in this landscape. 4. Synthesis and applications. The results indicate that the use of an abiotic surrogate such as rockiness can predict biodiversity value across multiple taxa. The mesofilter is therefore a valuable surrogacy and congruency tool for practical biodiversity conservation across this landscape and would likely have similar value if explored elsewhere. It also has value in the design and management of protected areas.
Journal Article
Temporal Biotic Homogenisation Patterns due to Urbanisation Are Taxon-Dependent
by
Iwachido, Yuki
,
Yamamoto, Sumire
,
Sasaki, Takehiro
in
Biodiversity
,
Birds
,
Butterflies & moths
2025
ABSTRACT Aim Accelerated urbanisation poses a major threat to global biodiversity. However, few studies have explored patterns of temporal biotic homogenisation due to urbanisation across multiple taxa. Location Tokyo, Japan. Methods We examined the temporal changes in species richness and composition in 15 remnant green spaces across the Tokyo metropolitan area, Japan, focusing on native species of three taxa (plants: 15 sites, birds: 7 sites and butterflies: 7 sites). First, we compared gamma diversity and species composition (dispersion and composition) between two surveys at a regional scale that included all study sites. Furthermore, we assessed temporal change in alpha diversity (species richness over time) and temporal beta diversity (changes in species composition over time) at each green space. We also clarified the relationships between those indices and environmental variables. To determine the species more impacted by urbanisation, we examined the relationship between the rate of species loss and their traits related to dispersal and adaptation. Results Gamma diversity decreased from the first to the second survey regardless of taxa. However, the pattern of temporal diversity changes due to urbanisation varied among taxa. For plants, temporal changes in alpha diversity decreased with the number of years between surveys. For birds, temporal beta diversity increased with the number of years between surveys. For butterflies, the dispersion of species composition at the regional scale decreased slightly from the first to the second survey. Annual herb and water‐dispersal plant species, as well as bird species with higher diet specialisation, were more prone to loss due to urbanisation. Main Conclusions Our findings demonstrate that patterns of temporal biotic homogenisation due to urbanisation vary among taxa. Therefore, enhancing species diversity within each green space and promoting species composition differences among green spaces are necessary to maximise multi‐taxa diversity in urban areas.
Journal Article
Factors influencing carrion communities are only partially consistent with those of deadwood necromass
2023
Research on decomposer communities has traditionally focused on plant litter or deadwood. Even though carrion forms highly nutrient-rich necromass that enhance ecosystem heterogeneity, the factors influencing saprophytic communities remain largely unknown. For deadwood, experiments have shown that different drivers determine beetles (i.e., decay stage, microclimate, and space), fungi (i.e., decay stage and tree species) and bacteria (decay stage only) assemblages. To test the hypothesis that similar factors also structure carrion communities, we sampled 29 carcasses exposed for 30 days that included Cervus elaphus (N = 6), Capreolus capreolus (N = 18), and Vulpes vulpes (N = 5) in a mountain forest throughout decomposition. Beetles were collected with pitfall traps, while microbial communities were characterized using amplicon sequencing. Assemblages were determined with a focus from rare to dominant species using Hill numbers. With increasing focus on dominant species, the relative importance of carcass identity on beetles and space on bacteria increased, while only succession and microclimate remained relevant for fungi. For beetle and bacteria with focus on dominant species, host identity was more important than microclimate, which is in marked contrast to deadwood. We conclude that factors influencing carrion saprophytic assemblages show some consistency, but also differences from those of deadwood assemblages, suggesting that short-lived carrion and long-lasting deadwood both provide a resource pulse with different adaptions in insects and microbes. As with deadwood, a high diversity of carcass species under multiple decay stages and different microclimates support a diverse decomposer community.
Journal Article
How did the animal come to cross the road? Drawing insights on animal movement from existing roadkill data and expert knowledge
2023
ContextAnimal movement through the landscape is essential to several ecological processes, assuring genetic flow, reproductive success and population dynamics. In fragmented landscapes, species change their movement patterns according to their sensitivity to landscape cover and configuration. Increased landscape habitat loss and fragmentation affects resource distribution and habitat availability, compelling species to move more frequently through anthropized matrices.ObjectivesOur aim was to provide a new prospect for what is known about animal movement through the landscape anthropogenic matrix in the Atlantic Forest biodiversity hotspot, by analyzing the potential movement distances of several mammal, bird, reptile, and amphibian species.MethodsWe used recorded roadkills within the Brazilian Atlantic Forest as a source of information of species’ occurrence. We assumed the euclidean distance from the roadkill spot to the nearest forest fragment as the potential movement distance by different species through the anthropogenic matrix. Experts’ classification of species’ forest dependence degree, and animal movement information from the literature survey was used to analyze the variation in potential animal movement distance in these matrices.ResultsWe analyzed 90 species, the majority of them being non-forest dependent (n = 64; 71%). The potential movement distances ranged from 0 to > 1500 m, and forest-dependent species presented lower mean distances (between 772 and 978 m) than non-forest dependent species (between 673 and 1015 m). The literature survey resulted in 44 articles regarding animal movement in the matrix, referred only to 22 species. No articles were found for 20 species, mainly reptiles and amphibians.ConclusionsBy comparing these values to the average distance between forest remnants in the Atlantic Forest, we expect that the distance to be traveled through the matrix to reach forest fragments may be restrictive, mainly for species with higher degree of forest dependence. Despite being descriptive, our results provide important insights on animal movement through the matrix, especially for less studied species, such as amphibians and reptiles.
Journal Article