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68,185
result(s) for
"parameter optimisation"
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Framework for classification of cancer gene expression data using Bayesian hyper-parameter optimization
2021
Computational classification of cancers is an important research problem. Gene expression data has 1000s of features, very few samples, and a class imbalance problem. In this paper, we have proposed a framework for the classification of cancer gene expression profiles. The framework consists of a pipeline of methods for data pre-processing, feature selection, and classification. Data pre-processing is done by standard scaling and normalization of the features. The feature selection is performed in two steps. First, recursive feature elimination (RFE) is used; then, a genetic algorithm is applied only in case RFE results in a feature subset of size more than a specific threshold. Next, is a meta-pool of diverse, individual as well as ensemble classifiers. Hyper-parameters of each member in the meta-pool are optimized using Bayesian Optimization. An algorithm is developed to select the best classifier from the meta-pool based on classification accuracy and computation time taken. We evaluated the framework on 6 publicly available microarray datasets and the PAN-Cancer RNA Sequencing dataset. We found that the classifier selected by the proposed framework produced significant improvement in classification accuracy and computation time required to predict labels for test datasets. A detailed comparison with the state-of-the-art methods shows that the proposed framework outperforms all of them.Graphic Abstract
Journal Article
Boosting the performance of pretrained CNN architecture on dermoscopic pigmented skin lesion classification
by
Nugroho, Hanung Adi
,
Ardiyanto, Igi
,
Nugroho, Erwin Setyo
in
Artificial neural networks
,
augmentation
,
Bayes Theorem
2023
Background Pigmented skin lesions (PSLs) pose medical and esthetic challenges for those affected. PSLs can cause skin cancers, particularly melanoma, which can be life‐threatening. Detecting and treating melanoma early can reduce mortality rates. Dermoscopic imaging offers a noninvasive and cost‐effective technique for examining PSLs. However, the lack of standardized colors, image capture settings, and artifacts makes accurate analysis challenging. Computer‐aided diagnosis (CAD) using deep learning models, such as convolutional neural networks (CNNs), has shown promise by automatically extracting features from medical images. Nevertheless, enhancing the CNN models' performance remains challenging, notably concerning sensitivity. Materials and methods In this study, we aim to enhance the classification performance of selected pretrained CNNs. We use the 2019 ISIC dataset, which presents eight disease classes. To achieve this goal, two methods are applied: resolution of the dataset imbalance challenge through augmentation and optimization of the training hyperparameters via Bayesian tuning. Results The performance improvement was observed for all tested pretrained CNNs. The Inception‐V3 model achieved the best performance compared to similar results, with an accuracy of 96.40% and an AUC of 0.98. Conclusion According to the study, classification performance was significantly enhanced by augmentation and Bayesian hyperparameter tuning.
Journal Article
A Geographic-Dependent Coupled Parameter Optimization Scheme Based on A-4DEnVar
2026
Coupled climate models integrate atmospheric, oceanic, and land submodels, while the uncertainty of model parameters from different parameterization schemes or empirically derived parameters inevitably introduces systematic biases. Coupled parameter optimization (CPO) can reduce these biases to improve weather forecast and climate prediction, but must address strong nonlinearities inherent in coupled models. The analytical four-dimensional ensemble variational (A-4DEnVar) data assimilation method retains the nonlinear processing capability of the four-dimensional variational (4D-Var) data assimilation method but gets rid of the dependence on the adjoint model. In this study, a novel dynamic independent point (DIP) scheme is introduced to the improved A-4DEnVar, which reduces computational dimensionality and further explores a broader parameter space of dimensionality reduction through the outer loop. Based on the improved A-4DEnVar, a series of geographic-dependent CPO experiments with an idealized 2D coupled model are carried out. Results show that A-4DEnVar accurately captures the geographical characteristics of parameters and effectively optimizes cross-component parameters despite strong nonlinearity. Additionally, the DIP scheme presents significant advantages compared to the static independent point scheme, especially with fewer independent points. This work is offering a new perspective for parameter optimization in coupled general circulation models used for climate estimation and prediction.
Journal Article
Comprehensive optimization of In625 laser cladding: from process parameters to path parameters
by
Zhang, Yingying
,
Sun, Zhengyu
,
Gao, Yanchong
in
Chemistry and Materials Science
,
Coefficient of friction
,
Content analysis
2025
This study aims to optimize the single-track process parameters (laser power
P
, scanning speed
V
, powder feed rate
F
) and multi-track, multi-layer path parameters (overlap distance
L
,
Z
-axis increment Δ
Z
) in In625 laser cladding. The optimization objectives include clad width
W
, height
H
, melt pool area
S
, and dilution rate
D
. A Taguchi experimental design was employed, utilizing bubble plots and surface plots to visually present the influence trends of process parameters on the optimization objectives. Analysis of variance (ANOVA) and signal-to-noise ratio (S/N) analysis were conducted to assess the significance and impact of the process parameters on the optimization objectives. Using the entropy-weight TOPSIS method, the optimal parameter combination (
P
= 450W,
V
= 9 mm/s,
F
= 10.21 g/min) was determined based on the
C
value of the comprehensive evaluation index. The path parameters were optimized using a combination of theoretical analysis and experimentation to obtain the optimal overlap distance (
L
= 730 μm) and
Z
-axis increment (Δ
Z
= 180 μm). The optimized parameters were validated through multi-track, multi-layer experiments, and the results show that the fusion cladding layer prepared with the optimized parameters has a uniform and dense organization, uniform hardness distribution, small fluctuation of friction coefficient, and stable performance of the fusion cladding layer. The optimized parameters contribute to the effective implementation of multi-track, multi-layer laser cladding processes, providing a reliable foundation for surface repair and modification in practical applications.
Journal Article
Forecasting Geomagnetic Storm Disturbances and Their Uncertainties Using Deep Learning
2023
Severe space weather produced by disturbed conditions on the Sun results in harmful effects both for humans in space and in high‐latitude flights, and for technological systems such as spacecraft or communications. Also, geomagnetically induced currents (GICs) flowing on long ground‐based conductors, such as power networks, potentially threaten critical infrastructures on Earth. The first step in developing an alarm system against GICs is to forecast them. This is a challenging task given the highly non‐linear dependencies of the response of the magnetosphere to these perturbations. In the last few years, modern machine‐learning models have shown to be very good at predicting magnetic activity indices. However, such complex models are on the one hand difficult to tune, and on the other hand they are known to bring along potentially large prediction uncertainties which are generally difficult to estimate. In this work we aim at predicting the SYM‐H index characterizing geomagnetic storms multiple‐hour ahead, using public interplanetary magnetic field (IMF) data from the Sun‐Earth L1 Lagrange point and SYM‐H data. We implement a type of machine‐learning model called long short‐term memory (LSTM) network. Our scope is to estimate the prediction uncertainties coming from a deep‐learning model in the context of forecasting the SYM‐H index. These uncertainties will be essential to set reliable alarm thresholds. The resulting uncertainties turn out to be sizable at the critical stages of the geomagnetic storms. Our methodology includes as well an efficient optimization of important hyper‐parameters of the LSTM network and robustness tests.
Journal Article
Research on parallel distributed clustering algorithm applied to cutting parameter optimization
2022
In the big data era, traditional data mining technology cannot meet the requirements of massive data processing with the background of intelligent manufacturing. Aiming at insufficient computing power and low efficiency in mining process, this paper proposes a improved
K
-means clustering algorithm based on the concept of distributed clustering in cloud computing environment. The improved algorithm (T.
K
-means) is combined with MapReduce computing framework of Hadoop platform to realize parallel computing, so as to perform processing tasks of massive data. In order to verify the practical performance of T.
K
-means algorithm, taking machining data of milling Ti-6Al-4V alloy as the mining object. The mapping relationship among cutting parameters, surface roughness, and material removal rate is mined, and the optimized value for cutting parameters is obtained. The results show that T.
K
-means algorithm can be used to mine the optimal cutting parameters, so that the best surface roughness can be obtained in milling Ti-6Al-4V titanium alloy.
Journal Article
Adaptive Estimation of Quasi-Empirical Proton Exchange Membrane Fuel Cell Models Based on Coot Bird Optimizer and Data Accumulation
by
Mohammed Elsayed Lotfy
,
Mohamed Ahmed Ali
,
Mohey Eldin Mandour
in
Accuracy
,
adaptive fuel cell model; model parameters’ optimization; coot bird algorithm; computational burden; numerical statistical assessment
,
Aging
2023
The ambitious spread of fuel cell usage is facing the aging problem, which has a significant impact on the cells’ output power. Therefore, it is necessary to develop reliable techniques that are capable of accurately characterizing the cell throughout its life. This paper proposes an adaptive parameter estimation technique to develop a robust proton exchange membrane fuel cell (PEMFC) model over its lifespan. This is useful for accurate monitoring, analysis, design, and control of the PEMFC and increasing its life. For this purpose, fair comparisons of nine recent optimization algorithms were made by implementing them for a typical quasi-empirical PEMFC model estimation problem. Investigating the best competitors relied on two conceptual factors, the solution accuracy and computational burden (as a novel assessment factor in this study). The computational burden plays a great role in accelerating the model parameters’ update process. The proposed techniques were applied to five commercial PEMFCs. Moreover, a necessary statistical analysis of the results was performed to make a solid comparison with the competitors. Among them, the proposed coot-bird-algorithm (CBO)-based technique achieved a superior and balanced performance. It surpassed the closest competitors by a difference of 16.01% and 62.53% in the accuracy and computational speed, respectively.
Journal Article
Normalization in Unsupervised Segmentation Parameter Optimization: A Solution Based on Local Regression Trend Analysis
by
Vanhuysse, Sabine
,
Lennert, Moritz
,
Wolff, Eléonore
in
Data management
,
Data processing
,
GRASS GIS
2018
In object-based image analysis (OBIA), the appropriate parametrization of segmentation algorithms is crucial for obtaining satisfactory image classification results. One of the ways this can be done is by unsupervised segmentation parameter optimization (USPO). A popular USPO method does this through the optimization of a “global score” (GS), which minimizes intrasegment heterogeneity and maximizes intersegment heterogeneity. However, the calculated GS values are sensitive to the minimum and maximum ranges of the candidate segmentations. Previous research proposed the use of fixed minimum/maximum threshold values for the intrasegment/intersegment heterogeneity measures to deal with the sensitivity of user-defined ranges, but the performance of this approach has not been investigated in detail. In the context of a remote sensing very-high-resolution urban application, we show the limitations of the fixed threshold approach, both in a theoretical and applied manner, and instead propose a novel solution to identify the range of candidate segmentations using local regression trend analysis. We found that the proposed approach showed significant improvements over the use of fixed minimum/maximum values, is less subjective than user-defined threshold values and, thus, can be of merit for a fully automated procedure and big data applications.
Journal Article
Algal-Derived Synthesis of Silver Nanoparticles Using the Unicellular ulvophyte sp. MBIC10591: Optimisation, Characterisation, and Biological Activities
by
Mashael Mohammed Bin-Meferij
,
Mariam Abdulaziz Alkhateeb
,
Haifa Essa Alfassam
in
antibacterial
,
anticancer
,
green synthesis
2022
Journal Article
Application of dimension reduction based multi-parameter optimization for the design of blast-resistant vehicle
2017
The design of blast-resistant vehicle provides an appropriate level of protection for the vehicle and occupants against the serious threat from landmine and improvised explosive devices (IED). Mathematically, the objective of this research is to optimize the configuration of light armored vehicle installed multilayer honeycomb sandwich structures (MHSS), shock-mitigating seat and seat belt, and cope with the challenge of highly computational cost on dealing with the large scale, multi-parameter, nonlinear and fluid-structure interaction simulation models. Multi material Arbitrary Lagrangian-Eulerian (MM-ALE) method is used to obtain the high-precision vehicle responses and occupant injuries under blast wave. The baseline model validated by the blast test is built, and the optimization model for blast-resistant vehicle is defined. Then, identifying important design parameters accurately is so difficultly when sufficient samples are not provided due to the expensive computational cost, and it’s inappropriate to screen parameters with inconsistent sequence of variable sensitivities for occupant injuries. Factor analysis based multi-parameter optimization (FAMO) is proposed to reduce the computational cost on improving the blast resistant performance of vehicle. The normal-boundary intersection (NBI) and the
R
2
metric are used to obtain optimal compromise solution which noticeable reduced the peak value of occupant injuries, and the physical insights which drive the optimal solution to reduce the occupant injuries is analyzed. Additional studies are conducted on comparing between proposed algorithm and the conventional algorithm, including shape of the Pareto front, optimal compromise solution, design variables and responses.
Journal Article