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6,414
result(s) for
"phenotypic selection"
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Phenotypic selection mosaic for flower length influenced by geographically varying hawkmoth pollinator proboscis length and abiotic environment
by
Pisano, Malén Aluhé Rubini
,
Soteras, Florencia
,
Moré, Marcela
in
abiotic environment
,
Caesalpinia gilliesii
,
coadaptation
2020
• Biotic and abiotic context may affect the intensity of interspecific interactions and subsequently drive locally particular phenotypic selection patterns on interacting traits.
• We evaluated the geographical variation of matching traits of the brush-type flowers of Caesalpinia gilliesii and of the proboscis length of its guild of hawkmoth pollinators, as well as their relationship with environmental variables. We assessed the geographical variation of interacting traits (style and filament vs mean proboscis length of the guild of hawkmoths) across seven populations and estimated phenotypic selection on the plant side.
• Interacting traits showed similar relationships with environmental variables. Phenotypic selection on the plant side was influenced by proboscis length and by environmental conditions. Mean proboscis length of the guild was shorter than previously recorded for the same study area, thus probably shifting the selective optima of flower length. We observed two presumptive coevolutionary cold spots where one-sided negative directional selection is acting on style length. The lack of selection on the pollinator side should be further confirmed.
• We provided joint evidence, mostly lacking, about the geographical variation of selective pressures on the plant side associated with both proboscis length and abiotic conditions. We suggest that recent environmental change may be shifting floral length optima.
Journal Article
Individual Covariation in Life‐History Traits: Seeing the Trees Despite the Forest
2002
We investigated the influence of age on survival and breeding rates in a long‐lived speciesRissa tridactylausing models with individual random effects permitting variation and covariation in fitness components among individuals. Differences in survival or breeding probabilities among individuals are substantial, and there was positive covariation between survival and breeding probability; birds that were more likely to survive were also more likely to breed, given that they survived. The pattern of age‐related variation in these rates detected at the individual level differed from that observed at the population level. Our results provided confirmation of what has been suggested by other investigators: within‐cohort phenotypic selection can mask senescence. Although this phenomenon has been extensively studied in humans and captive animals, conclusive evidence of the discrepancy between population‐level and individual‐level patterns of age‐related variation in life‐history traits is extremely rare in wild animal populations. Evolutionary studies of the influence of age on life‐history traits should use approaches differentiating population level from the genuine influence of age: only the latter is relevant to theories of life‐history evolution. The development of models permitting access to individual variation in fitness is a promising advance for the study of senescence and evolutionary processes.
Journal Article
Differentiation of Floral Traits Associated with Pollinator Preference in a Generalist-Pollinated Herb,Trollius ranunculoides(Ranunculaceae)
2013
Premise of research. In flowers that are specialized, floral traits often differentiate in association with pollinator shifts. However, in species of generalized pollination, the role of pollinators in local population differentiation of floral traits is difficult to test. A crucial line of evidence is to contrast the direction and strength of pollinator selection among populations.
Methodology. Variation in floral traits and pollinator assemblages was investigated in two populations of a generalist-pollinated herb,Trollius ranunculoides(Ranunculaceae), to detect the potential role of pollinators in floral differentiation.
Pivotal results. The alpine population was visited more by flies, and the subalpine population was visited more by bees. Flower manipulations suggested that large flowers were more attractive to both bees and flies, while more petals were favored only by nectar-feeding flies. Compared to the subalpine population, plants in the alpine population had more petals per flower but smaller flowers where flies were predominant pollinators. Flower differences appeared to be genetically maintained in a common garden. Phenotypic selection analysis indicated stronger selection on petal number in the alpine population and oppositely more intense selection on flower diameter in the subalpine population, in accordance with the preferences of local pollinator assemblages.
Conclusions. Heritability in floral traits, differences in local pollinator assemblages, and corresponding differences in phenotypic selection are together consistent with the view of pollinator-mediated selection on floral differentiation inT. ranunculoides.
Journal Article
COMPARING STRENGTHS OF DIRECTIONAL SELECTION: HOW STRONG IS STRONG?
by
Houle, David
,
Hereford, Joe
,
Hansen, Thomas F.
in
Breeder's equation
,
elasticity
,
natural selection
2004
The fundamental equation in evolutionary quantitative genetics, the Lande equation, describes the response to directional selection as a product of the additive genetic variance and the selection gradient of trait value on relative fitness. Comparisons of both genetic variances and selection gradients across traits or populations require standardization, as both are scale dependent. The Lande equation can be standardized in two ways. Standardizing by the variance of the selected trait yields the response in units of standard deviation as the product of the heritability and the variance‐standardized selection gradient. This standardization conflates selection and variation because the phenotypic variance is a function of the genetic variance. Alternatively, one can standardize the Lande equation using the trait mean, yielding the proportional response to selection as the product of the squared coefficient of additive genetic variance and the mean‐standardized selection gradient. Mean‐standardized selection gradients are particularly useful for summarizing the strength of selection because the mean‐standardized gradient for fitness itself is one, a convenient benchmark for strong selection. We review published estimates of directional selection in natural populations using mean‐standardized selection gradients. Only 38 published studies provided all the necessary information for calculation of mean‐standardized gradients. The median absolute value of multivariate mean‐standardized gradients shows that selection is on average 54% as strong as selection on fitness. Correcting for the upward bias introduced by taking absolute values lowers the median to 31%, still very strong selection. Such large estimates clearly cannot be representative of selection on all traits. Some possible sources of overestimation of the strength of selection include confounding environmental and genotypic effects on fitness, the use of fitness components as proxies for fitness, and biases in publication or choice of traits to study.
Journal Article
Natural selection acting on integrated phenotypes
by
Ochoa-López, Sofía
,
Boege, Karina
,
Domínguez, César A.
in
Chemical defence
,
Chemical defense
,
chemical defenses
2020
Plant functional strategies are usually accomplished through the simultaneous expression of different traits, and hence their correlations should be promoted by natural selection. The adaptive value of correlations among leaf functional traits, however, has not been assessed in natural populations.
We estimated intraspecific variation in leaf functional traits related to the primary metabolism and anti-herbivore defence in a population of Turnera velutina. We analysed whether natural selection favoured the expression of individual traits, particular combinations of traits or leaf phenotypic integration
Patterns of covariation among traits were related to water and nitrogen economy, and were similar among genotypes, but the magnitude of their phenotypic integration differed by 10-fold. Although families did not differ in the mean values of leaf functional traits, directional selection favoured low nitrogen content and low chemical defence, high content of chlorophyll, sugar in extrafloral nectar and trichome density. Families with higher phenotypic integration among leaf traits grew faster and produced more flowers.
We suggest that the coordinated expression of leaf traits has an adaptive value, probably related to optimisation in the expression of traits related to water conservation and nitrogen acquisition.
Journal Article
Highly efficient homology‐directed repair using CRISPR/Cpf1‐geminiviral replicon in tomato
2020
Summary
Genome editing via the homology‐directed repair (HDR) pathway in somatic plant cells is very inefficient compared with error‐prone repair by nonhomologous end joining (NHEJ). Here, we increased HDR‐based genome editing efficiency approximately threefold compared with a Cas9‐based single‐replicon system via the use of de novo multi‐replicon systems equipped with CRISPR/LbCpf1 in tomato and obtained replicon‐free but stable HDR alleles. The efficiency of CRISPR/LbCpf1‐based HDR was significantly modulated by physical culture conditions such as temperature and light. Ten days of incubation at 31 °C under a light/dark cycle after Agrobacterium‐mediated transformation resulted in the best performance among the tested conditions. Furthermore, we developed our single‐replicon system into a multi‐replicon system that effectively increased HDR efficiency. Although this approach is still challenging, we showed the feasibility of HDR‐based genome editing of a salt‐tolerant SlHKT1;2 allele without genomic integration of antibiotic markers or any phenotypic selection. Self‐pollinated offspring plants carrying the HKT1;2 HDR allele showed stable inheritance and germination tolerance in the presence of 100 mm NaCl. Our work may pave the way for transgene‐free editing of alleles of interest in asexually and sexually reproducing plants.
Journal Article
Simultaneous selection for grain yield and protein content in genomics-assisted wheat breeding
by
Michel, Sebastian
,
Ametz, Christian
,
Pachler, Bernadette
in
Genomics
,
Genotypes
,
Plant breeding
2019
Key messageLarge genetic improvement can be achieved by simultaneous genomic selection for grain yield and protein content when combining different breeding strategies in the form of selection indices.Genomic selection has been implemented in many national and international breeding programmes in recent years. Numerous studies have shown the potential of this new breeding tool; few have, however, taken the simultaneous selection for multiple traits into account that is though common practice in breeding programmes. The simultaneous improvement in grain yield and protein content is thereby a major challenge in wheat breeding due to a severe negative trade-off. Accordingly, the potential and limits of multi-trait selection for this particular trait complex utilizing the vast phenotypic and genomic data collected in an applied wheat breeding programme were investigated in this study. Two breeding strategies based on various genomic-selection indices were compared, which (1) aimed to select high-protein genotypes with acceptable yield potential and (2) develop high-yielding varieties, while maintaining protein content. The prediction accuracy of preliminary yield trials could be strongly improved when combining phenotypic and genomic information in a genomics-assisted selection approach, which surpassed both genomics-based and classical phenotypic selection methods both for single trait predictions and in genomic index selection across years. The employed genomic selection indices mitigated furthermore the negative trade-off between grain yield and protein content leading to a substantial selection response for protein yield, i.e. total seed nitrogen content, which suggested that it is feasible to develop varieties that combine a superior yield potential with comparably high protein content, thus utilizing available nitrogen resources more efficiently.
Journal Article
Genetic Gains in Grain Yield Through Genomic Selection in Eight Bi‐parental Maize Populations under Drought Stress
by
Sehabiague, Pierre
,
Semagn, Kassa
,
Babu, Raman
in
Agricultural production
,
Breeding methods
,
breeding value
2015
ABSTRACT
Genomic selection incorporates all the available marker information into a model to predict genetic values of breeding progenies for selection. The objective of this study was to estimate genetic gains in grain yield from genomic selection (GS) in eight bi‐parental maize populations under managed drought stress environments. In each population, 148 to 300 F2:3 (C0) progenies were derived and crossed to a single‐cross tester from a complementary heterotic group. The resulting testcrosses of each population were evaluated under two to four managed drought stress and three to four well‐watered conditions in different locations and genotyped with 191 to 286 single nucleotide polymorphism (SNP) markers. The top 10% families were selected from C0 using a phenotypic selection index and were intermated to form C1. Selections both at C1 and C2 were based on genomic estimated breeding values (GEBVs). The best lines from C0 were also advanced using a pedigree selection scheme. For genetic gain studies, a total of 55 entries representing the eight populations were crossed to a single‐cross tester, and evaluated in four managed drought stress environments. Each population was represented by bulk seed containing equal amounts of seed of C0, C1, C2, C3, parents, F1s, and lines developed via pedigree selection. Five commercial checks were included for comparison. The average gain from genomic selection per cycle across eight populations was 0.086 Mg ha–1. The average grain yield of C3–derived hybrids was significantly higher than that of hybrids derived from C0. Hybrids derived from C3 produced 7.3% (0.176 Mg ha–1) higher grain yield than those developed through the conventional pedigree breeding method. The study demonstrated that genomic selection is more effective than pedigree‐based conventional phenotypic selection for increasing genetic gains in grain yield under drought stress in tropical maize.
Journal Article
EVOLUTIONARY POTENTIAL OF CHAMAECRISTA FASCICULATA IN RELATION TO CLIMATE CHANGE. I. CLINAL PATTERNS OF SELECTION ALONG AN ENVIRONMENTAL GRADIENT IN THE GREAT PLAINS
2004
Climate change will alter natural selection on native plant populations. Little information is available to predict how selection will change in the future and how populations will respond. Insight can be obtained by comparing selection regimes in current environments to selection regimes in environments similar to those predicted for the future. To mimic predicted temporal change in climate, three natural populations of the annual legume Chamaecrista fasciculata were sampled from a climate gradient in the Great Plains and progeny of formal crosses were reciprocally planted back into common gardens across this climate gradient. In each garden, native populations produced significantly more seed than the other populations, providing strong evidence of local adaptation. Phenotypic selection analysis conducted by site showed that plants with slower reproductive development, more leaves, and thicker leaves were favored in the most southern garden. Evidence of clinal variation in selection regimes was also found; selection coefficients were ordered according to the latitude of the common gardens. The adaptive value of native traits was indicated by selection toward the mean of local populations. Repeated clinal patterns in linear and nonlinear selection coefficients among populations and within and between sites were found. To the extent that temporal change in climate into the future will parallel the differences in selection across this spatial gradient, this study suggests that selection regimes will be displaced northward and different trait values will be favored in natural populations.
Journal Article
Darwin's beautiful contrivances: evolutionary and functional evidence for floral adaptation
by
Harder, Lawrence D.
,
Johnson, Steven D.
in
adaptation
,
Adaptation, Physiological
,
Biodiversity
2009
Summary 530 I. Introduction 530 II. The process of floral and inflorescence adaptation 532 III. Experimental studies of flowers as adaptations 538 IV. Floral diversification: microevolution writ large? 539 V. Concluding comments 541 Acknowledgements 542 References 542 Although not 'a professed botanist', Charles Darwin made seminal contributions to understanding of floral and inflorescence function while seeking evidence of adaptation by natural selection. This review considers the legacy of Darwin's ideas from three perspectives. First, we examine the process of floral and inflorescence adaptation by surveying studies of phenotypic selection, heritability and selection responses. Despite widespread phenotypic and genetic capacity for natural selection, only one-third of estimates indicate phenotypic selection. Second, we evaluate experimental studies of floral and inflorescence function and find that they usually demonstrate that reproductive traits represent adaptations. Finally, we consider the role of adaptation in floral diversification. Despite different diversification modes (coevolution, divergent use of the same pollen vector, pollinator shifts), evidence of pollination ecotypes and phylogenetic patterns suggests that adaptation commonly contributes to floral diversity. Thus, this review reveals a contrast between the inconsistent occurrence of phenotypic selection and convincing experimental and comparative evidence that floral traits are adaptations. Rather than rejecting Darwin's hypotheses about floral evolution, this contrast suggests that the tempo of creative selection varies, with strong, consistent selection during episodes of diversification, but relatively weak and inconsistent selection during longer, 'normal' periods of relative phenotypic stasis.
Journal Article