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We explore empirical and theoretical evidence for the functional significance of plant-litter diversity and the extraordinary high diversity of decomposer organisms in the process of litter decomposition and the consequences for biogeochemical cycles. Potential mechanisms for the frequently observed litter-diversity effects on mass loss and nitrogen dynamics include fungi-driven nutrient transfer among litter species, inhibition or stimulation of microorganisms by specific litter compounds, and positive feedback of soil fauna due to greater habitat and food diversity. Theory predicts positive effects of microbial diversity that result from functional niche complementarity, but the few existing experiments provide conflicting results. Microbial succession with shifting enzymatic capabilities enhances decomposition, whereas antagonistic interactions among fungi that compete for similar resources slow litter decay. Soil-fauna diversity manipulations indicate that the number of trophic levels, species identity, and the presence of keystone species have a strong impact on decomposition, whereas the importance of diversity within functional groups is not clear at present. In conclusion, litter species and decomposer diversity can significantly influence carbon and nutrient turnover rates; however, no general or predictable pattern has emerged. Proposed mechanisms for diversity effects need confirmation and a link to functional traits for a comprehensive understanding of how biodiversity interacts with decomposition processes and the consequences of ongoing biodiversity loss for ecosystem functioning.

Microplastic pollution is a topic of increasing concern for the world's oceans, freshwaters and, most recently, soils. Microplastics have been found in soils across the globe. Like other anthropogenic pollutants, they can negatively affect a range of soil organisms through several mechanisms, though often dependent on particle size, shape and polymer type. However, microplastics are unique among pollutants due to the diversity of ways in which soil organisms may themselves be able to affect their occurrence and distribution and mediate their effects on the rest of the soil food web. In this review, we argue for a more explicitly ecological framing of this novel issue for the soil environment and discuss their potential interactions with soil communities, including microplastic formation via microbial and faunal fragmentation of large plastic debris and organisms such as earthworms placing microplastic particles in unique pedological contexts they could not otherwise reach. Ecological interactions may be crucial for dictating microplastics’ ultimate fate and effect on terrestrial ecosystems. A free Plain Language Summary can be found within the Supporting Information of this article. A free Plain Language Summary can be found within the Supporting Information of this article.

Protists include all eukaryotes except plants, fungi and animals. They are an essential, yet often forgotten, component of the soil microbiome. Method developments have now furthered our understanding of the real taxonomic and functional diversity of soil protists. They occupy key roles in microbial foodwebs as consumers of bacteria, fungi and other small eukaryotes. As parasites of plants, animals and even of larger protists, they regulate populations and shape communities. Pathogenic forms play a major role in public health issues as human parasites, or act as agricultural pests. Predatory soil protists release nutrients enhancing plant growth. Soil protists are of key importance for our understanding of eukaryotic evolution and microbial biogeography. Soil protists are also useful in applied research as bioindicators of soil quality, as models in ecotoxicology and as potential biofertilizers and biocontrol agents. In this review, we provide an overview of the enormous morphological, taxonomical and functional diversity of soil protists, and discuss current challenges and opportunities in soil protistology. Research in soil biology would clearly benefit from incorporating more protistology alongside the study of bacteria, fungi and animals.

Bromus tectorum is an exotic annual grass that currently dominates many western U.S. semi-arid ecosystems, and the effects of this grass on ecosystems in general, and soil biota specifically, are unknown. Bromus recently invaded two ungrazed and un-burned perennial bunchgrass communities in southeastern Utah. This study compared the soil food-web structure of the two native grassland associations (Stipa [S] and Hilaria [H]), with and without the presence of Bromus. Perennial grass and total vascular-plant cover were higher in S than in H plots, while quantities of ground litter were similar. Distribution of live and dead plant material was highly clumped in S and fairly homogenous in H. Soil food-web structure was different between H and S, with lower trophic levels more abundant in H and higher trophic levels more abundant in S. In Bromus-invaded plots, the quantity of ground litter was 2.2 times higher in Hilaria-Bromus (HB) than in H plots, and 2.8 times higher in Stipa-Bromus (SB) than in S plots. Soil biota in HB generally responded to the Bromus invasion in an opposite manner than in SB, e.g., if a given component of the food web increased in one community, it generally decreased in the other. Active bacteria decreased in H vs. HB, while increasing in S vs. SB. Soil and live plant-infecting fungi were the exception, as they increased in both types of invaded plots relative to uninvaded plots. Dead-plant-infecting fungi decreased in H vs. HB and increased in S vs. SB. Most higher-trophic-level organisms increased in HB relative to H, while decreasing in SB relative to S. Given the mixed response to invasion, the structure of these soil food webs appears to be controlled by both plant inputs and internal dynamics between trophic levels. When compared to non-invaded sites, soil and soil food-web characterisitics of the newly invaded sites included: (1) lower species richness and lower absolute numbers of fungi and invertebrates; (2) greater abundance of active bacteria; (3) similar species of bacteria and fungi as those found in soils invaded over 50 yr ago; (4) higher levels of silt (thus greater fertility and soil water-holding capacity); and (5) a more continuous cover of living and dead plant material (thus facilitating germination of the large-seeded Bromus). These results illustrate that (1) soil food-web structure can vary widely within what would generally be considered one vegetation type (semi-arid grassland), depending on plant species composition within that type, and (2) addition of a common resource can evoke disparate responses from individual food-web compartments, depending on their original structure.

We used stable isotopes to examine the incorporation of plant carbon into the belowground food web of an agricultural system. Plots were established and planted with maize (Zea mays) in a rye field (Secale cereale) near Göttingen (northern Germany) in May 1999. In October 1999, April 2000, and October 2000, meso- and macrofauna and maize and rye litter were collected in each plot and analyzed for^{13}\\text{C}$and^{15}\\text{N}$content.^{15}\\text{N}$signatures suggested that the soil animal species analyzed span three trophic levels with the trophic position of species varying little in time. The species investigated formed a continuum from primary to secondary decomposers to predators. On average, predator species differed from primary and secondary decomposers by 3.9$\\delta {}^{15}\\text{N}$suggesting that they fed on a mixed diet of both decomposer groups. The combined analysis of^{13}\\text{C}$and^{15}\\text{N}$signatures allowed us to identify links between prey and consumer species. In October 1999, shortly after maize residues had been incorporated into the plots, maize-born carbon was present in each of the animal species investigated, including top predators. The incorporation of maize carbon into the belowground food web increased during the following 12 months but the concentration of maize-born carbon never exceeded 50% in any of the species. Furthermore, the ranks of the incorporation of maize-born carbon of the species changed little. The results suggest that the belowground food web relies heavily on carbon originating from plant residues from before the recent two growing seasons. In most species the amount of maize-born carbon increased continuously; however, in some species it decreased during winter, suggesting that these species switched to a diet based more on C3 plants during winter, or predominantly metabolized carbon incorporated during the last growing season. The study documents that the combined analysis of^{13}\\text{C}$and^{15}\\text{N}$signatures in soil invertebrate species, after replacement of C3 by C4 plants, is a powerful tool to better understand the structure of the belowground food web and the flux of carbon through it.

Microplastics are recognized as an emerging contaminant worldwide. Although microplastics have been shown to strongly affect organisms in aquatic environments, less is known about whether and how microplastics can affect different taxa within a soil community, and it is unclear whether these effects can cascade through soil food webs. By conducting a microplastic manipulation experiment, i.e. adding low-density polyethylene fragments in the field, we found that microplastic addition significantly affected the composition and abundance of microarthropod and nematode communities. Contrary to soil fauna, we found only small effects of microplastics on the biomass and structure of soil microbial communities. Nevertheless, structural equation modelling revealed that the effects of microplastics strongly cascade through the soil food webs, leading to the modification of microbial functioning with further potential consequences on soil carbon and nutrient cycling. Our results highlight that taking into account the effects of microplastics at different trophic levels is important to elucidate the mechanisms underlying the ecological impacts of microplastic pollution on soil functioning.

Aims Soil nematode community is an important component of the soil food web, which has been widely recognized as a key bio-indicator for assessing the influence of nature restoration on ecological functions. However, the dynamics of the abundance, structure of soil nematode community remain unclear under nature restoration. Methods The soil nematode community of natural secondary forests was investigated using a chronosequence approach in subtropical forests in China. Six succession stages of nature restoration were sampled to represent forest stand age groups with 4-5, 8-12, 18-22, 25-30, 35-40 and over 100 years. To enhance our understanding of the factors influencing soil nematode communities, we also examined the relationships between plant community, soil microbial community, and soil properties by structural equation modeling. Results Soil nematode abundance gradually increased with forest stand ages, which reached a peak value (574 individuals 100 g −1 dry soil) in the oldest stands. Soil available nitrogen and phosphorus were key factors influencing soil nematode abundance and diversity during secondary forest succession. The plant parasite index decreased with forest stand ages, which indicated that ecosystem function and health would be improved as nature restoration. The structure of soil nematode community was more sensitive to microbial community compared to plant community. The bottom-up effects of microbial communities on soil nematode communities were important drivers of nematode communities in subtropical forests. Conclusions This study demonstrates the active responses of soil nematode community to nature restoration and highlights the importance of the above-ground and below-ground interactions to the soil food web.

The consequences of permanent loss of species or species groups from plant communities are poorly understood, although there is increasing evidence that individual species effects are important in modifying ecosystem properties. We conducted a field experiment in a New Zealand perennial grassland ecosystem, creating artificial vegetation gaps and imposing manipulation treatments on the reestablishing vegetation. Treatments consisted of continual removal of different subsets or \"functional groups\" of the flora. We monitored vegetation and soil biotic and chemical properties over a 3-yr period. Plant competitive effects were clear: removal of the C3grass Lolium perenne L. enhanced vegetative cover, biomass, and species richness of both the C4grass and dicotyledonous weed functional groups and had either positive or negative effects on the legume Trifolium repens L., depending on season. Treatments significantly affected total plant cover and biomass; in particular, C4grass removal reduced total plant biomass in summer, because no other species had appropriate phenology. Removal of C3grasses reduced total root biomass and drastically enhanced overall shoot-to-root biomass ratios. Aboveground net primary productivity (NPP) was not strongly affected by any treatment, indicating strong compensatory effects between different functional components of the flora. Removing all plants often negatively affected three further trophic levels of the decomposer functional food web: microflora, microbe-feeding nematodes, and predaceous nematodes. However, as long as plants were present, we did not find strong effects of removal treatments, NPP, or plant biomass on these trophic groupings, which instead were most closely related to spatial variation in soil chemical properties across all trophic levels, soil N in particular. Larger decomposer organisms, i.e., Collembola and earthworms, were unresponsive to any factor other than removal of all plants, which reduced their populations. We also considered five functional components of the soil biota at finer taxonomic levels: three decomposer components (microflora, microbe-feeding nematodes, predaceous nematodes) and two herbivore groups (nematodes and arthropods). Taxa within these five groups responded to removal treatments, indicating that plant community composition has multitrophic effects at higher levels of taxonomic resolution. The principal ordination axes summarizing community-level data for different trophic groups in the soil food web were related to each other in several instances, but the plant ordination axes were only significantly related to those of the soil microfloral community. There were time lag effects, with ordination axes of soil-associated herbivorous arthropods and microbial-feeding nematodes being related to ordination axes representing plant community structure at earlier measurement dates. Taxonomic diversity of some soil organism groups was linked to plant removals or to plant diversity. For herbivorous arthropods, removal of C4grasses enhanced diversity; there were negative correlations between plant and arthropod diversity, presumably because of negative influences of C4species in the most diverse treatments. There was evidence of lag relationships between diversity of plants and that of the three decomposer groups, indicating multitrophic effects of altering plant diversity. Relatively small effects of plant removal on the decomposer food web were also apparent in soil processes regulated by this food web. Decomposition rates of substrates added to soils showed no relationship with treatment, and rates of CO2evolution from the soil were only adversely affected when all plants were removed. Few plant functional-group effects on soil nutrient dynamics were identified. Although some treatments affected temporal variability (and thus stability) of soil biotic properties (particularly CO2release) throughout the experiment, there was no evidence of destabilizing effects of plant removals. Our data provide evidence that permanent exclusion of plant species from the species pool can have important consequences for overall vegetation composition in addition to the direct effects of vegetation removal, and various potential effects on both the above- and belowground subsystems. The nature of many of these effects is driven by which plant species are lost from the system, which depends on the various attributes or traits of these species.

Soil health is a matter of growing concern because of its degradation due to unsustainable anthropogenic activities over the last few decades. It is maintained by interactions among the components of the soil food web commonly concentrated in the vicinity of the plant roots, called the rhizosphere. The soil food web is dominated by nematodes. They occupy various trophic positions because of their diverse feeding habits. The free-living forms are mainly dependent on soil bacteria and fungi for their nutrition, while the parasitic forms feed on plant roots. The population of these two groups is regulated by the activities of predatory nematodes which can be carnivorous or omnivorous. The soil nematodes thereby partake responsibilities in nutrient cycling, mineralization and decomposition pathways which, in turn, affects the aboveground productivity. This intricately connected food web structure is vulnerable to disturbances like increased soil salinity, acidity, nitrogen enrichment, tillage, crop rotations, fertilizers, pesticides, soil amendment techniques and heavy metal pollution. The effects are reflected by alterations in the abundance and diversity of soil nematodes belonging to various trophic groups. These alterations have been formulated into measurable indices like maturity index (MI), structure index (SI), enrichment index (EI) and channel index (CI). The faunal profile and metabolic footprints of soil nematodes are latest developments in the field of nematode community analyses. Though these indices cannot replace the conventional soil ecotoxicological assays, they can give added information about soil biology which can be utilized to design sustainable land use practices.