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The complete chloroplast genome of Lilium cernuum: genome structure and evolution
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The complete chloroplast genome of Lilium cernuum: genome structure and evolution
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Journal Article
The complete chloroplast genome of Lilium cernuum: genome structure and evolution
2016
Overview
Lilium cernuum
is endangered and was listed in the category of key protected wild plants in China. In this study, we report the complete chloroplast genome of
L. cernuum
using Illumina paired-end sequencing. The entire chloroplast genome maps as a circular molecule of 152,604 bp built with a quadripartite organization: two inverted repeats (IRs) of 26,481 bp separated by a large single copy (LSC) sequence of 82,058 bp and a small single copy (SSC) sequence of 17,584 bp. The chloroplast genome contains the conservative structure present in most Liliaceae chloroplasts composing of 79 protein-coding genes, 30 tRNAs and 4 rRNAs. Among these genes, 15 harbor a single intron, and 2 contain a couple of introns. A maximum likelihood phylogenomic analysis showed that
L. cernuum
was closely related to
L. tsingtauense
and
L. hansonii
that belonged to the family Liliaceae.
Publisher
Springer Netherlands,Springer Nature B.V
Subject
