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The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors
by
Gullo, Irene
, Das, Kakoli
, Martins, Diana
, Monteiro, Ana Rita
, Ferreira, Marta
, Tan, Patrick
, Oliveira, Patrícia
, Carvalho, Joana
, Lemos, Diana
, Oliveira, Carla
, Carneiro, Fátima
in
Gastric cancer
/ Immunotherapy
/ Protein expression
2018
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The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors
by
Gullo, Irene
, Das, Kakoli
, Martins, Diana
, Monteiro, Ana Rita
, Ferreira, Marta
, Tan, Patrick
, Oliveira, Patrícia
, Carvalho, Joana
, Lemos, Diana
, Oliveira, Carla
, Carneiro, Fátima
in
Gastric cancer
/ Immunotherapy
/ Protein expression
2018
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While trying to remove the title from your shelf something went wrong :( Kindly try again later!
Do you wish to request the book?
The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors
by
Gullo, Irene
, Das, Kakoli
, Martins, Diana
, Monteiro, Ana Rita
, Ferreira, Marta
, Tan, Patrick
, Oliveira, Patrícia
, Carvalho, Joana
, Lemos, Diana
, Oliveira, Carla
, Carneiro, Fátima
in
Gastric cancer
/ Immunotherapy
/ Protein expression
2018
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The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors
Journal Article
The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable Tumors
2018
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Overview
Background: Epstein-Barr Virus (EBV) positive and microsatellite unstable (MSI-high) gastric cancer (GC) are molecular subgroups with distinctive molecular profiles. We explored the transcriptomic differences between EBV+ and MSI-high GCs, and the expression of current GC immunotherapy targets such as PD-1, PD-L1, CTLA4 and Dies1/VISTA. Methods: Using Nanostring Technology and comparative bioinformatics, we analyzed the expression of 499 genes in 46 GCs, classified either as EBV positive (EBER in situ hybridization) or MSI-high (PCR/fragment analysis). PD-L1 protein expression was assessed by immunohistochemistry. Results: From the 46 GCs, 27 tested MSI-high/EBV−, 15 tested MSS/EBV+ and four tested MSS/EBV−. The Nanostring CodeSet could segregate GCs according to MSI and, to a lesser extent, EBV status. Functional annotation of differentially expressed genes associated MSI-high/EBV− GCs with mitotic activity and MSS/EBV+ GCs with immune response. PD-L1 protein expression, evaluated in stromal immune cells, was lower in MSI-high/EBV− GCs. High mRNA expression of PD-1, CTLA4 and Dies1/VISTA and distinctive PD-1/PD-L1 co-expression patterns (PD-1high/PD-L1low, PD-1high/PDL1high) were associated with MSS/EBV+ molecular subtype and gastric cancer with lymphoid stroma (GCLS) morphological features. Conclusions: EBV+ and MSI-high GCs present distinct transcriptomic profiles. GCLS/EBV+ cases frequently present co-expression of multiple immunotherapy targets, a finding with putative therapeutic implications.
Publisher
MDPI AG,MDPI
Subject
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