Journal Article

Exploring the Peanut Viromes Across 15 Cultivars in Korea

Lee, Bong Choon, Park, Jisoo, Cho, Won Kyong, Kwon, Ki Wook, Choi, Hoseong, Kim, Sang-Min, Jo, Yeonhwa, Hong, Jin-Sung

2026

Overview

This study explores the virome of fifteen peanut cultivars in Korea. Through RNA sequencing, 305 viral contigs associated with cucumber mosaic virus (CMV), peanut mottle virus (PeMoV), bean common mosaic virus (BCMV), and brassica yellows virus (BrYV) were identified, with CMV notably prevalent across samples. Evaluation of viral abundance using viral reads and TPM values revealed CMV dominance in reads and PeMoV prominence in normalized values in select samples. Complete genomes of BCMV, PeMoV, BrYV, and CMV segments were assembled, enabling phylogenetic analysis that uncovered genetic relationships among viral isolates. RT-PCR confirmed BCMV, CMV, and PeMoV presence. Genetic diversity within BCMV was evident through single-nucleotide polymorphism (SNP) analysis, displaying diverse patterns and correlations with viral reads. This study discusses the implications for peanut cultivation, stressing the importance of ongoing research to manage viral diseases. It forms a foundational resource for future investigations into peanut virology, guiding strategies for disease management in peanut crops.

• Publisher: MDPI AG,Multidisciplinary Digital Publishing Institute (MDPI)
• Subject: Agricultural production / Analysis / Arachis - virology / Asymptomatic / Biological diversity / Crop diseases / Cucumovirus - genetics / Cultivars / Genetic Variation / Genome, Viral / Genomes / Genomics / Medical research / Medicine, Experimental / Peanuts / Phylogeny / Plant diseases / Plant Diseases - virology / Plant Viruses - classification / Plant Viruses - genetics / Polymorphism, Single Nucleotide / Proteins / Republic of Korea / RNA / RNA sequencing / Seeds / Single nucleotide polymorphisms / Virome - genetics / Viruses