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strawberry (Fragaria×ananassa) fruit-specific rhamnogalacturonate lyase 1 (FaRGLyase1) gene encodes an enzyme involved in the degradation of cell-wall middle lamellae
by
Hidalgo, Miguel A
, Molina-Hidalgo, Francisco J
, Franco, Antonio R
, Caballero, José Luis
, Muñoz-Blanco, Juan
, Blanco-Portales, Rosario
, Mercado, José A
, Villatoro, Carmen
, Monfort, Amparo
, Medina-Puche, Laura
in
abscisic acid
/ Abscisic Acid - metabolism
/ Agrobacterium
/ Agronomy. Soil science and plant productions
/ auxins
/ bioinformatics
/ Biological and medical sciences
/ Cell Wall - enzymology
/ Cell Wall - ultrastructure
/ cell walls
/ Computational Biology - methods
/ electron microscopy
/ firmness
/ Fragaria
/ Fragaria - enzymology
/ Fragaria - genetics
/ Fruit - enzymology
/ Fruit - ultrastructure
/ fruits
/ Fundamental and applied biological sciences. Psychology
/ gene expression
/ Gene Expression Regulation, Enzymologic
/ Gene Expression Regulation, Plant
/ General agronomy. Plant production
/ genes
/ Genes, Plant
/ Genetic Linkage
/ hardness
/ Harvesting. Postharvest. Storage
/ Indoleacetic Acids - metabolism
/ linkage groups
/ microarray technology
/ Oligonucleotide Array Sequence Analysis
/ parenchyma
/ pectins
/ Pectins - metabolism
/ Phylogeny
/ Plant physiology and development
/ Plants, Genetically Modified - enzymology
/ Plants, Genetically Modified - genetics
/ Polysaccharide-Lyases - genetics
/ Polysaccharide-Lyases - metabolism
/ Quantitative Trait Loci
/ RESEARCH PAPER
/ ripening
/ RNA Interference
/ shelf life
/ strawberries
/ Vegetative propagation. Sowing and planting. Harvesting
2013
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strawberry (Fragaria×ananassa) fruit-specific rhamnogalacturonate lyase 1 (FaRGLyase1) gene encodes an enzyme involved in the degradation of cell-wall middle lamellae
by
Hidalgo, Miguel A
, Molina-Hidalgo, Francisco J
, Franco, Antonio R
, Caballero, José Luis
, Muñoz-Blanco, Juan
, Blanco-Portales, Rosario
, Mercado, José A
, Villatoro, Carmen
, Monfort, Amparo
, Medina-Puche, Laura
in
abscisic acid
/ Abscisic Acid - metabolism
/ Agrobacterium
/ Agronomy. Soil science and plant productions
/ auxins
/ bioinformatics
/ Biological and medical sciences
/ Cell Wall - enzymology
/ Cell Wall - ultrastructure
/ cell walls
/ Computational Biology - methods
/ electron microscopy
/ firmness
/ Fragaria
/ Fragaria - enzymology
/ Fragaria - genetics
/ Fruit - enzymology
/ Fruit - ultrastructure
/ fruits
/ Fundamental and applied biological sciences. Psychology
/ gene expression
/ Gene Expression Regulation, Enzymologic
/ Gene Expression Regulation, Plant
/ General agronomy. Plant production
/ genes
/ Genes, Plant
/ Genetic Linkage
/ hardness
/ Harvesting. Postharvest. Storage
/ Indoleacetic Acids - metabolism
/ linkage groups
/ microarray technology
/ Oligonucleotide Array Sequence Analysis
/ parenchyma
/ pectins
/ Pectins - metabolism
/ Phylogeny
/ Plant physiology and development
/ Plants, Genetically Modified - enzymology
/ Plants, Genetically Modified - genetics
/ Polysaccharide-Lyases - genetics
/ Polysaccharide-Lyases - metabolism
/ Quantitative Trait Loci
/ RESEARCH PAPER
/ ripening
/ RNA Interference
/ shelf life
/ strawberries
/ Vegetative propagation. Sowing and planting. Harvesting
2013
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strawberry (Fragaria×ananassa) fruit-specific rhamnogalacturonate lyase 1 (FaRGLyase1) gene encodes an enzyme involved in the degradation of cell-wall middle lamellae
by
Hidalgo, Miguel A
, Molina-Hidalgo, Francisco J
, Franco, Antonio R
, Caballero, José Luis
, Muñoz-Blanco, Juan
, Blanco-Portales, Rosario
, Mercado, José A
, Villatoro, Carmen
, Monfort, Amparo
, Medina-Puche, Laura
in
abscisic acid
/ Abscisic Acid - metabolism
/ Agrobacterium
/ Agronomy. Soil science and plant productions
/ auxins
/ bioinformatics
/ Biological and medical sciences
/ Cell Wall - enzymology
/ Cell Wall - ultrastructure
/ cell walls
/ Computational Biology - methods
/ electron microscopy
/ firmness
/ Fragaria
/ Fragaria - enzymology
/ Fragaria - genetics
/ Fruit - enzymology
/ Fruit - ultrastructure
/ fruits
/ Fundamental and applied biological sciences. Psychology
/ gene expression
/ Gene Expression Regulation, Enzymologic
/ Gene Expression Regulation, Plant
/ General agronomy. Plant production
/ genes
/ Genes, Plant
/ Genetic Linkage
/ hardness
/ Harvesting. Postharvest. Storage
/ Indoleacetic Acids - metabolism
/ linkage groups
/ microarray technology
/ Oligonucleotide Array Sequence Analysis
/ parenchyma
/ pectins
/ Pectins - metabolism
/ Phylogeny
/ Plant physiology and development
/ Plants, Genetically Modified - enzymology
/ Plants, Genetically Modified - genetics
/ Polysaccharide-Lyases - genetics
/ Polysaccharide-Lyases - metabolism
/ Quantitative Trait Loci
/ RESEARCH PAPER
/ ripening
/ RNA Interference
/ shelf life
/ strawberries
/ Vegetative propagation. Sowing and planting. Harvesting
2013
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strawberry (Fragaria×ananassa) fruit-specific rhamnogalacturonate lyase 1 (FaRGLyase1) gene encodes an enzyme involved in the degradation of cell-wall middle lamellae
Journal Article
strawberry (Fragaria×ananassa) fruit-specific rhamnogalacturonate lyase 1 (FaRGLyase1) gene encodes an enzyme involved in the degradation of cell-wall middle lamellae
2013
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Overview
Pectins are essential components of primary plant cell walls and middle lamellae, and are related to the consistency of the fruit and its textural changes during ripening. In fact, strawberries become soft as the middle lamellae of cortical parenchyma cells are extensively degraded during ripening, leading to the observed short post-harvest shelf life. Using a custom-made oligonucleotide-based strawberry microarray platform, a putative rhamnogalacturonate lyase gene (FaRGlyase1) was identified. Bioinformatic analysis of the FaRGlyase1 sequence allowed the identification of a conserved rhamnogalacturonate lyase domain, which was also present in other putative RGlyase sequences deposited in the databases. Expression of FaRGlyase1 occurred mainly in the receptacle, concurrently with ripening, and it was positively regulated by abscisic acid and negatively by auxins. FaRGLyase1 gene expression was transiently silenced by injecting live Agrobacterium cells harbouring RNA interference constructs into fruit receptacles. Light and electron microscopy analyses of these transiently silenced fruits revealed that this gene is involved in the degradation of pectins present in the middle lamella region between parenchymatic cells. In addition, genetic linkage association analyses in a strawberry-segregating population showed that FaRGLyase1 is linked to a quantitative trait loci linkage group related to fruit hardness and firmness. The results showed that FaRGlyase1 could play an important role in the fruit ripening-related softening process that reduces strawberry firmness and post-harvest life.
Publisher
Oxford University Press [etc.],Oxford University Press
Subject
/ Agronomy. Soil science and plant productions
/ auxins
/ Biological and medical sciences
/ Computational Biology - methods
/ firmness
/ Fragaria
/ fruits
/ Fundamental and applied biological sciences. Psychology
/ Gene Expression Regulation, Enzymologic
/ Gene Expression Regulation, Plant
/ General agronomy. Plant production
/ genes
/ hardness
/ Harvesting. Postharvest. Storage
/ Indoleacetic Acids - metabolism
/ Oligonucleotide Array Sequence Analysis
/ pectins
/ Plant physiology and development
/ Plants, Genetically Modified - enzymology
/ Plants, Genetically Modified - genetics
/ Polysaccharide-Lyases - genetics
/ Polysaccharide-Lyases - metabolism
/ ripening
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