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High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from Chlamydomonas reinhardtii—An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle
by
Henri, Julien
, Lemaire, Stéphane
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
, Le Moigne, Théo
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
, Biologie Computationnelle, Quantitative et Synthétique (ex LCQB) (CQSB)
, Sorbonne Université (SU)
, Crozet, Pierre
, Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes (LBMCE)
in
Aldose-Ketose Isomerases - chemistry
/ Aldose-Ketose Isomerases - genetics
/ Aldose-Ketose Isomerases - metabolism
/ Biochemistry, Molecular Biology
/ Carbon
/ Catalytic Domain
/ Chlamydomonas reinhardtii - enzymology
/ Chlamydomonas reinhardtii - physiology
/ Chloroplast Proteins - chemistry
/ Chloroplast Proteins - genetics
/ Chloroplast Proteins - metabolism
/ Chloroplasts
/ Crystal structure
/ Crystallography, X-Ray
/ Enzymes
/ Hydrogen bonds
/ Life Sciences
/ Metabolites
/ Models, Molecular
/ Molecular weight
/ Phosphorylation
/ Photosynthesis
/ Protein Multimerization
/ Protein Processing, Post-Translational
/ Proteins
/ Scattering, Small Angle
/ Structural Biology
/ X-Ray Diffraction
2020
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High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from Chlamydomonas reinhardtii—An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle
by
Henri, Julien
, Lemaire, Stéphane
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
, Le Moigne, Théo
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
, Biologie Computationnelle, Quantitative et Synthétique (ex LCQB) (CQSB)
, Sorbonne Université (SU)
, Crozet, Pierre
, Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes (LBMCE)
in
Aldose-Ketose Isomerases - chemistry
/ Aldose-Ketose Isomerases - genetics
/ Aldose-Ketose Isomerases - metabolism
/ Biochemistry, Molecular Biology
/ Carbon
/ Catalytic Domain
/ Chlamydomonas reinhardtii - enzymology
/ Chlamydomonas reinhardtii - physiology
/ Chloroplast Proteins - chemistry
/ Chloroplast Proteins - genetics
/ Chloroplast Proteins - metabolism
/ Chloroplasts
/ Crystal structure
/ Crystallography, X-Ray
/ Enzymes
/ Hydrogen bonds
/ Life Sciences
/ Metabolites
/ Models, Molecular
/ Molecular weight
/ Phosphorylation
/ Photosynthesis
/ Protein Multimerization
/ Protein Processing, Post-Translational
/ Proteins
/ Scattering, Small Angle
/ Structural Biology
/ X-Ray Diffraction
2020
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High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from Chlamydomonas reinhardtii—An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle
by
Henri, Julien
, Lemaire, Stéphane
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
, Le Moigne, Théo
, Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
, Biologie Computationnelle, Quantitative et Synthétique (ex LCQB) (CQSB)
, Sorbonne Université (SU)
, Crozet, Pierre
, Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes (LBMCE)
in
Aldose-Ketose Isomerases - chemistry
/ Aldose-Ketose Isomerases - genetics
/ Aldose-Ketose Isomerases - metabolism
/ Biochemistry, Molecular Biology
/ Carbon
/ Catalytic Domain
/ Chlamydomonas reinhardtii - enzymology
/ Chlamydomonas reinhardtii - physiology
/ Chloroplast Proteins - chemistry
/ Chloroplast Proteins - genetics
/ Chloroplast Proteins - metabolism
/ Chloroplasts
/ Crystal structure
/ Crystallography, X-Ray
/ Enzymes
/ Hydrogen bonds
/ Life Sciences
/ Metabolites
/ Models, Molecular
/ Molecular weight
/ Phosphorylation
/ Photosynthesis
/ Protein Multimerization
/ Protein Processing, Post-Translational
/ Proteins
/ Scattering, Small Angle
/ Structural Biology
/ X-Ray Diffraction
2020
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High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from Chlamydomonas reinhardtii—An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle
Journal Article
High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from Chlamydomonas reinhardtii—An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle
2020
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Overview
The Calvin–Benson cycle is the key metabolic pathway of photosynthesis responsible for carbon fixation and relies on eleven conserved enzymes. Ribose-5-phosphate isomerase (RPI) isomerizes ribose-5-phosphate into ribulose-5-phosphate and contributes to the regeneration of the Rubisco substrate. Plant RPI is the target of diverse post-translational modifications including phosphorylation and thiol-based modifications to presumably adjust its activity to the photosynthetic electron flow. Here, we describe the first experimental structure of a photosynthetic RPI at 1.4 Å resolution. Our structure confirms the composition of the catalytic pocket of the enzyme. We describe the homo-dimeric state of the protein that we observed in the crystal and in solution. We also map the positions of previously reported post-translational modifications and propose mechanisms by which they may impact the catalytic parameters. The structural data will inform the biochemical modeling of photosynthesis.
Publisher
MDPI,CCSD,MDPI AG
Subject
Aldose-Ketose Isomerases - chemistry
/ Aldose-Ketose Isomerases - genetics
/ Aldose-Ketose Isomerases - metabolism
/ Biochemistry, Molecular Biology
/ Carbon
/ Chlamydomonas reinhardtii - enzymology
/ Chlamydomonas reinhardtii - physiology
/ Chloroplast Proteins - chemistry
/ Chloroplast Proteins - genetics
/ Chloroplast Proteins - metabolism
/ Enzymes
/ Protein Processing, Post-Translational
/ Proteins
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