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Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development
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Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development
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Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development
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Journal Article
Genome-Wide Identification of TCP Family Transcription Factors in Medicago truncatula Reveals Significant Roles of miR319-Targeted TCPs in Nodule Development
2018
Overview
TCP proteins, the plant-specific transcription factors, are involved in the regulation of multiple aspects of plant development among different species, such as leaf development, branching, and flower symmetry. However, thus far, the roles of TCPs in legume, especially in nodulation are still not clear. In this study, a genome-wide analysis of
genes was carried out to discover their evolution and function in
. In total, 21
were identified and classified into class I and class II, and the class II
were further divided into two subclasses, CIN and CYC/TB1. The expression profiles of
are dramatically different. The universal expression of class I
was detected in all organs. However, the
in CIN subclass were highly expressed in leaf and most of the members in CYC/TB1 subclass were highly expressed in flower. Such organ-specific expression patterns of
suggest their different roles in plant development. In addition, most
were down-regulated during the nodule development, except for the putative
targets,
, and
. Overexpression of
significantly reduced the expression level of
and resulted in the decreased nodule number, indicating the important roles of
-targeted
in nodulation. Taken together, this study systematically analyzes the
gene family at a genome-wide level and their possible functions in nodulation, which lay the basis for further explorations of
module in association with nodule development in
.
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