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BamBam: genome sequence analysis tools for biologists
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Journal Article
BamBam: genome sequence analysis tools for biologists
2014
Overview
Background
Massive computational power is needed to analyze the genomic data produced by next-generation sequencing, but extensive computational experience and specific knowledge of algorithms should not be necessary to run genomic analyses or interpret their results.
Findings
We present BamBam, a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments.
Conclusions
BamBam provides a powerful and convenient framework to analyze genome sequence data contained in BAM files.
Publisher
BioMed Central,BioMed Central Ltd,Springer Nature B.V
Subject
