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Optical mapping in plant comparative genomics
by
Lyons, Eric
, Tang, Haibao
, Town, Christopher D
in
advances and challenges
/ Bioinformatics
/ Biomedical and Life Sciences
/ Chromosome Mapping - methods
/ Chromosomes, Plant
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Data Mining and Knowledge Discovery
/ DNA Fingerprinting - methods
/ DNA sequencing
/ Domestication
/ Evolution
/ Gene mapping
/ Gene sequencing
/ Genetic diversity
/ Genome, Plant
/ Genomes
/ Genomics
/ Human Genetics
/ Life Sciences
/ Mapping
/ Microorganisms
/ Optical mapping: new applications
/ Plants - genetics
/ Polyploidy
/ Population genetics
/ Population studies
/ Proteomics
/ Review
/ Sequence Analysis, DNA
2015
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Optical mapping in plant comparative genomics
by
Lyons, Eric
, Tang, Haibao
, Town, Christopher D
in
advances and challenges
/ Bioinformatics
/ Biomedical and Life Sciences
/ Chromosome Mapping - methods
/ Chromosomes, Plant
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Data Mining and Knowledge Discovery
/ DNA Fingerprinting - methods
/ DNA sequencing
/ Domestication
/ Evolution
/ Gene mapping
/ Gene sequencing
/ Genetic diversity
/ Genome, Plant
/ Genomes
/ Genomics
/ Human Genetics
/ Life Sciences
/ Mapping
/ Microorganisms
/ Optical mapping: new applications
/ Plants - genetics
/ Polyploidy
/ Population genetics
/ Population studies
/ Proteomics
/ Review
/ Sequence Analysis, DNA
2015
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Do you wish to request the book?
Optical mapping in plant comparative genomics
by
Lyons, Eric
, Tang, Haibao
, Town, Christopher D
in
advances and challenges
/ Bioinformatics
/ Biomedical and Life Sciences
/ Chromosome Mapping - methods
/ Chromosomes, Plant
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Data Mining and Knowledge Discovery
/ DNA Fingerprinting - methods
/ DNA sequencing
/ Domestication
/ Evolution
/ Gene mapping
/ Gene sequencing
/ Genetic diversity
/ Genome, Plant
/ Genomes
/ Genomics
/ Human Genetics
/ Life Sciences
/ Mapping
/ Microorganisms
/ Optical mapping: new applications
/ Plants - genetics
/ Polyploidy
/ Population genetics
/ Population studies
/ Proteomics
/ Review
/ Sequence Analysis, DNA
2015
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Journal Article
Optical mapping in plant comparative genomics
2015
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Overview
Optical mapping has been widely used to improve de novo plant genome assemblies, including rice, maize, Medicago, Amborella, tomato and wheat, with more genomes in the pipeline. Optical mapping provides long-range information of the genome and can more easily identify large structural variations. The ability of optical mapping to assay long single DNA molecules nicely complements short-read sequencing which is more suitable for the identification of small and short-range variants. Direct use of optical mapping to study population-level genetic diversity is currently limited to microbial strain typing and human diversity studies. Nonetheless, optical mapping shows great promise in the study of plant trait development, domestication and polyploid evolution. Here we review the current applications and future prospects of optical mapping in the field of plant comparative genomics.
Publisher
Oxford University Press,BioMed Central
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