Journal Article

A viral assembly factor promotes AAV2 capsid formation in the nucleolus

Kleinschmidt, Jürgen A., Hausen, Harald zur, Schmidt, Kristin, Sonntag, Florian

2010

Overview

The volume available in icosahedral virus capsids limits the size of viral genomes. To overcome this limitation, viruses have evolved strategies to increase their coding capacity by using more than one ORF while keeping the genome length constant. The assembly of virus capsids requires the coordinated interaction of a large number of subunits to generate a highly ordered structure in which the viral genome can be enclosed. To understand this process, it is essential to know which viral and nonviral components are involved in the assembly reaction. Here, we show that the adeno-associated virus (AAV) encodes a protein required for capsid formation by means of a nested, alternative ORF of the cap gene. Translation is initiated at a nonconventional translation start site, resulting in the expression of a protein with a calculated molecular weight of 23 kDa. This protein, designated assembly-activating protein (AAP), is localized in the host cell nucleolus, where AAV capsid morphogenesis occurs. AAP targets newly synthesized capsid proteins to this organelle and in addition fulfils a function in the assembly reaction itself. Sequence analysis suggests that also all other species of the genus Dependovirus encode a homologous protein in their cap gene. The arrangement of different ORFs that encode capsid proteins and an assembly factor within the same mRNA facilitates a timely coordinated expression of the components involved in the assembly process.

• Publisher: National Academy of Sciences,National Acad Sciences
• Subject: Adeno-associated virus / Amino Acid Sequence / Base Sequence / Biological Sciences / Capsid / Capsid - physiology / Capsid protein / Capsid Proteins - genetics / Capsid Proteins - physiology / Capsids / Catabolite activator protein / Cell Line / Cell nucleolus / Cell Nucleolus - virology / Cells / coat proteins / Dependoparvovirus / Dependovirus / Dependovirus - genetics / Dependovirus - physiology / DNA Primers - genetics / DNA, Viral - genetics / Gene Expression / genes / Genes, Viral / Genetic Complementation Test / Genomes / HeLa Cells / Humans / messenger RNA / Molecular Sequence Data / Molecular weight / Morphogenesis / Nucleoli / Open Reading Frames / Organelles / Pathogenesis / Plasmids / protein synthesis / Proteins / Ribonucleic acid / RNA / sequence analysis / Sequence Homology, Amino Acid / Sequence Homology, Nucleic Acid / Start codon / Translation / Virology / virus assembly / Virus Assembly - physiology / Viruses