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C11orf95-RELA reprograms 3D epigenome in supratentorial ependymoma
by
Li, Xiao-Nan
, Cheng, Albert Wu
, Lau, Ching C.
, Jillette, Nathaniel
, Zhu, Jacqueline Jufen
in
Brain cancer
/ Brain tumors
/ Chromatin
/ Fusion protein
/ Genes
/ Genetic aspects
/ Medicine
/ Medicine & Public Health
/ Molecular modelling
/ Neurosciences
/ Original Paper
/ Pathology
/ Protein binding
/ RelA protein
/ Transcription
/ Tumorigenesis
2020
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C11orf95-RELA reprograms 3D epigenome in supratentorial ependymoma
by
Li, Xiao-Nan
, Cheng, Albert Wu
, Lau, Ching C.
, Jillette, Nathaniel
, Zhu, Jacqueline Jufen
in
Brain cancer
/ Brain tumors
/ Chromatin
/ Fusion protein
/ Genes
/ Genetic aspects
/ Medicine
/ Medicine & Public Health
/ Molecular modelling
/ Neurosciences
/ Original Paper
/ Pathology
/ Protein binding
/ RelA protein
/ Transcription
/ Tumorigenesis
2020
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Do you wish to request the book?
C11orf95-RELA reprograms 3D epigenome in supratentorial ependymoma
by
Li, Xiao-Nan
, Cheng, Albert Wu
, Lau, Ching C.
, Jillette, Nathaniel
, Zhu, Jacqueline Jufen
in
Brain cancer
/ Brain tumors
/ Chromatin
/ Fusion protein
/ Genes
/ Genetic aspects
/ Medicine
/ Medicine & Public Health
/ Molecular modelling
/ Neurosciences
/ Original Paper
/ Pathology
/ Protein binding
/ RelA protein
/ Transcription
/ Tumorigenesis
2020
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C11orf95-RELA reprograms 3D epigenome in supratentorial ependymoma
Journal Article
C11orf95-RELA reprograms 3D epigenome in supratentorial ependymoma
2020
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Overview
Supratentorial ependymoma (ST-EPN) is a type of malignant brain tumor mainly seen in children. Since 2014, it has been known that an intrachromosomal fusion
C11orf95-RELA
is an oncogenic driver in ST-EPN [Parker et al. Nature 506:451–455 (2014); Pietsch et al. Acta Neuropathol 127:609–611 (2014)] but the molecular mechanisms of oncogenesis are unclear. Here we show that the C11orf95 component of the fusion protein dictates DNA binding activity while the RELA component is required for driving the expression of ependymoma-associated genes. Epigenomic characterizations using ChIP-seq and HiChIP approaches reveal that C11orf95-RELA modulates chromatin states and mediates chromatin interactions, leading to transcriptional reprogramming in ependymoma cells. Our findings provide important characterization of the molecular underpinning of
C11orf95-RELA
fusion and shed light on potential therapeutic targets for
C11orf95-RELA
subtype ependymoma.
Publisher
Springer Berlin Heidelberg,Springer,Springer Nature B.V
Subject
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