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An immunofluorescence microscopy assay to discriminate distinct expression patterns of HIV-1 Gag and Nef proteins in HIV-1 provirus-harboring cells
by
Smith, Mindy
, Imamichi, Tomozumi
, Imamichi, Hiromi
, Wiscovitch-Russo, Rosana
, Sui, Hongyan
, Lane, H Clifford
in
Aldehydes
/ Antibodies
/ Biology and Life Sciences
/ Cloning
/ Fluorescent antibody technique
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ HEK293 Cells
/ HIV
/ HIV (Viruses)
/ HIV Infections - virology
/ HIV patients
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ Human immunodeficiency virus
/ Humans
/ Immunofluorescence
/ Lab Protocol
/ Lectins
/ Localization
/ Medicine and Health Sciences
/ Microscopy
/ Microscopy, Fluorescence - methods
/ nef Gene Products, Human Immunodeficiency Virus - genetics
/ nef Gene Products, Human Immunodeficiency Virus - metabolism
/ Nef protein
/ Plasma
/ Proteins
/ Proviruses
/ Proviruses - genetics
/ Proviruses - metabolism
/ Research and Analysis Methods
/ Viral antibodies
/ Viral proteins
/ Viruses
2026
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An immunofluorescence microscopy assay to discriminate distinct expression patterns of HIV-1 Gag and Nef proteins in HIV-1 provirus-harboring cells
by
Smith, Mindy
, Imamichi, Tomozumi
, Imamichi, Hiromi
, Wiscovitch-Russo, Rosana
, Sui, Hongyan
, Lane, H Clifford
in
Aldehydes
/ Antibodies
/ Biology and Life Sciences
/ Cloning
/ Fluorescent antibody technique
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ HEK293 Cells
/ HIV
/ HIV (Viruses)
/ HIV Infections - virology
/ HIV patients
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ Human immunodeficiency virus
/ Humans
/ Immunofluorescence
/ Lab Protocol
/ Lectins
/ Localization
/ Medicine and Health Sciences
/ Microscopy
/ Microscopy, Fluorescence - methods
/ nef Gene Products, Human Immunodeficiency Virus - genetics
/ nef Gene Products, Human Immunodeficiency Virus - metabolism
/ Nef protein
/ Plasma
/ Proteins
/ Proviruses
/ Proviruses - genetics
/ Proviruses - metabolism
/ Research and Analysis Methods
/ Viral antibodies
/ Viral proteins
/ Viruses
2026
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An immunofluorescence microscopy assay to discriminate distinct expression patterns of HIV-1 Gag and Nef proteins in HIV-1 provirus-harboring cells
by
Smith, Mindy
, Imamichi, Tomozumi
, Imamichi, Hiromi
, Wiscovitch-Russo, Rosana
, Sui, Hongyan
, Lane, H Clifford
in
Aldehydes
/ Antibodies
/ Biology and Life Sciences
/ Cloning
/ Fluorescent antibody technique
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ HEK293 Cells
/ HIV
/ HIV (Viruses)
/ HIV Infections - virology
/ HIV patients
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ Human immunodeficiency virus
/ Humans
/ Immunofluorescence
/ Lab Protocol
/ Lectins
/ Localization
/ Medicine and Health Sciences
/ Microscopy
/ Microscopy, Fluorescence - methods
/ nef Gene Products, Human Immunodeficiency Virus - genetics
/ nef Gene Products, Human Immunodeficiency Virus - metabolism
/ Nef protein
/ Plasma
/ Proteins
/ Proviruses
/ Proviruses - genetics
/ Proviruses - metabolism
/ Research and Analysis Methods
/ Viral antibodies
/ Viral proteins
/ Viruses
2026
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An immunofluorescence microscopy assay to discriminate distinct expression patterns of HIV-1 Gag and Nef proteins in HIV-1 provirus-harboring cells
Journal Article
An immunofluorescence microscopy assay to discriminate distinct expression patterns of HIV-1 Gag and Nef proteins in HIV-1 provirus-harboring cells
2026
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Overview
Over 95% of HIV-1 proviruses are defective and were once considered clinically irrelevant. However, growing evidence shows that these defective proviruses can still be transcribed and translated into viral proteins. Here, we developed an improved immunofluorescence protocol that combines two anti-Nef antibodies with one anti-Gag antibody, along with membrane and nuclear staining, enabling direct visualization of protein expression and localization. This method allows detailed characterization of the expression patterns and subcellular distribution of Gag and Nef proteins derived from defective proviruses. The protocol provides a practical tool for investigating the potential functions of proteins expressed from defective HIV-1 proviruses and for facilitating the ability to determine the biologic activity of cells harboring defective HIV-1 proviruses in patients living with HIV.
Publisher
Public Library of Science,PLOS
Subject
/ Cloning
/ Fluorescent antibody technique
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Genomes
/ HIV
/ Human immunodeficiency virus
/ Humans
/ Lectins
/ Medicine and Health Sciences
/ Microscopy, Fluorescence - methods
/ nef Gene Products, Human Immunodeficiency Virus - genetics
/ nef Gene Products, Human Immunodeficiency Virus - metabolism
/ Plasma
/ Proteins
/ Research and Analysis Methods
/ Viruses
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