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Comparative genomics of the major parasitic worms
by
University of Liverpool
, Cooper, Philip J
, The George Washington University (GW)
, Yamaguchi University
, Allan, Fiona
, University of Wisconsin-Madison
, Sato, Hiroshi
, Agresearch Ltd
, European Molecular Biology Laboratory European Bioinformatics Institute
, Hill, Dolores E
, Gomez Samblas, Mercedes
, Universidad Complutense de Madrid = Complutense University of Madrid [Madrid] (UCM)
, CHU Trousseau [APHP] ; Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)
, Scholz, Tomas
, O'Boyle, Noel Michael
, Mutowo, Prudence
, National History Museum
, Biodiversity Research Center ; Academia Sinica
, Asano, Kazuhito
, Blaxter, Mark L
, Emery, Aidan
, Moredun Research Institute [Penicuik, UK] (MRI)
, Centre for Cardiovascular Science ; The University of Edinburgh
, Makepeace, Benjamin
, Reid, Adam J
, Hallsworth-Pepin, Kymberlie
, Tracey, Alan
, Kuo, Tzu-Hao
, University of Toronto
, Bisset, Stewart A
, The University of New Mexico [Albuquerque] ; New Mexico Consortium (NMC)
, Hawdon, John M
, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENT
in
45/23
/ 631/114/2184
/ 631/114/2785
/ 631/154
/ 631/208/212
/ 692/699/255/1715
/ Acids
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Annotations
/ Bioinformatics
/ Biology
/ Biomedical and Life Sciences
/ Biomedicine
/ Births
/ Cancer Research
/ Comparative studies
/ Crop production
/ Drug development
/ Environmental Sciences
/ Enzymes
/ Family relations
/ Flatworms
/ Gene families
/ Gene Function
/ Genes
/ Genetic aspects
/ Genome - genetics
/ Genomes
/ Genomics
/ Genomics - methods
/ Health aspects
/ Helminths
/ Helminths - genetics
/ Human Genetics
/ Humans
/ Immune response
/ Infections
/ Legal fees
/ Life Sciences
/ Metabolism
/ Migration
/ Nematoda - genetics
/ Nematodes
/ Parasites
/ Parasitism
/ Phylogenetics
/ Phylogeny
/ Physiological aspects
/ Protein families
/ Protein turnover
/ Proteins
/ Roundworms
/ Tropical diseases
/ Worms
2019
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Comparative genomics of the major parasitic worms
by
University of Liverpool
, Cooper, Philip J
, The George Washington University (GW)
, Yamaguchi University
, Allan, Fiona
, University of Wisconsin-Madison
, Sato, Hiroshi
, Agresearch Ltd
, European Molecular Biology Laboratory European Bioinformatics Institute
, Hill, Dolores E
, Gomez Samblas, Mercedes
, Universidad Complutense de Madrid = Complutense University of Madrid [Madrid] (UCM)
, CHU Trousseau [APHP] ; Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)
, Scholz, Tomas
, O'Boyle, Noel Michael
, Mutowo, Prudence
, National History Museum
, Biodiversity Research Center ; Academia Sinica
, Asano, Kazuhito
, Blaxter, Mark L
, Emery, Aidan
, Moredun Research Institute [Penicuik, UK] (MRI)
, Centre for Cardiovascular Science ; The University of Edinburgh
, Makepeace, Benjamin
, Reid, Adam J
, Hallsworth-Pepin, Kymberlie
, Tracey, Alan
, Kuo, Tzu-Hao
, University of Toronto
, Bisset, Stewart A
, The University of New Mexico [Albuquerque] ; New Mexico Consortium (NMC)
, Hawdon, John M
, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENT
in
45/23
/ 631/114/2184
/ 631/114/2785
/ 631/154
/ 631/208/212
/ 692/699/255/1715
/ Acids
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Annotations
/ Bioinformatics
/ Biology
/ Biomedical and Life Sciences
/ Biomedicine
/ Births
/ Cancer Research
/ Comparative studies
/ Crop production
/ Drug development
/ Environmental Sciences
/ Enzymes
/ Family relations
/ Flatworms
/ Gene families
/ Gene Function
/ Genes
/ Genetic aspects
/ Genome - genetics
/ Genomes
/ Genomics
/ Genomics - methods
/ Health aspects
/ Helminths
/ Helminths - genetics
/ Human Genetics
/ Humans
/ Immune response
/ Infections
/ Legal fees
/ Life Sciences
/ Metabolism
/ Migration
/ Nematoda - genetics
/ Nematodes
/ Parasites
/ Parasitism
/ Phylogenetics
/ Phylogeny
/ Physiological aspects
/ Protein families
/ Protein turnover
/ Proteins
/ Roundworms
/ Tropical diseases
/ Worms
2019
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Comparative genomics of the major parasitic worms
by
University of Liverpool
, Cooper, Philip J
, The George Washington University (GW)
, Yamaguchi University
, Allan, Fiona
, University of Wisconsin-Madison
, Sato, Hiroshi
, Agresearch Ltd
, European Molecular Biology Laboratory European Bioinformatics Institute
, Hill, Dolores E
, Gomez Samblas, Mercedes
, Universidad Complutense de Madrid = Complutense University of Madrid [Madrid] (UCM)
, CHU Trousseau [APHP] ; Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)
, Scholz, Tomas
, O'Boyle, Noel Michael
, Mutowo, Prudence
, National History Museum
, Biodiversity Research Center ; Academia Sinica
, Asano, Kazuhito
, Blaxter, Mark L
, Emery, Aidan
, Moredun Research Institute [Penicuik, UK] (MRI)
, Centre for Cardiovascular Science ; The University of Edinburgh
, Makepeace, Benjamin
, Reid, Adam J
, Hallsworth-Pepin, Kymberlie
, Tracey, Alan
, Kuo, Tzu-Hao
, University of Toronto
, Bisset, Stewart A
, The University of New Mexico [Albuquerque] ; New Mexico Consortium (NMC)
, Hawdon, John M
, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENT
in
45/23
/ 631/114/2184
/ 631/114/2785
/ 631/154
/ 631/208/212
/ 692/699/255/1715
/ Acids
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Annotations
/ Bioinformatics
/ Biology
/ Biomedical and Life Sciences
/ Biomedicine
/ Births
/ Cancer Research
/ Comparative studies
/ Crop production
/ Drug development
/ Environmental Sciences
/ Enzymes
/ Family relations
/ Flatworms
/ Gene families
/ Gene Function
/ Genes
/ Genetic aspects
/ Genome - genetics
/ Genomes
/ Genomics
/ Genomics - methods
/ Health aspects
/ Helminths
/ Helminths - genetics
/ Human Genetics
/ Humans
/ Immune response
/ Infections
/ Legal fees
/ Life Sciences
/ Metabolism
/ Migration
/ Nematoda - genetics
/ Nematodes
/ Parasites
/ Parasitism
/ Phylogenetics
/ Phylogeny
/ Physiological aspects
/ Protein families
/ Protein turnover
/ Proteins
/ Roundworms
/ Tropical diseases
/ Worms
2019
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Journal Article
Comparative genomics of the major parasitic worms
2019
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Overview
Parasitic nematodes (roundworms) and platyhelminths (flatworms) cause debilitating chronic infections of humans and animals, decimate crop production and are a major impediment to socioeconomic development. Here we report a broad comparative study of 81 genomes of parasitic and non-parasitic worms. We have identified gene family births and hundreds of expanded gene families at key nodes in the phylogeny that are relevant to parasitism. Examples include gene families that modulate host immune responses, enable parasite migration though host tissues or allow the parasite to feed. We reveal extensive lineage-specific differences in core metabolism and protein families historically targeted for drug development. From an in silico screen, we have identified and prioritized new potential drug targets and compounds for testing. This comparative genomics resource provides a much-needed boost for the research community to understand and combat parasitic worms.
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