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Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
by
Ellenberger, Tom
, Silvian, Laura F.
, Pham, Phuong
, Toth, Eric A.
, Goodman, Myron F.
in
Amino Acid Sequence
/ Archaeal Proteins
/ Bacterial Proteins - chemistry
/ Bacterial Proteins - metabolism
/ Biochemistry
/ Biological Microscopy
/ Biomedical and Life Sciences
/ Catalysis
/ Conserved Sequence
/ Crystallography, X-Ray
/ Dbh protein
/ Deoxyribonucleic acid
/ DNA
/ DNA Polymerase beta - chemistry
/ DNA-Directed DNA Polymerase
/ E coli
/ Escherichia coli Proteins
/ Humans
/ Kinetics
/ letter
/ Life Sciences
/ Membrane Biology
/ Models, Molecular
/ Molecular Sequence Data
/ Mutagenesis
/ Protein Structure
/ Protein Structure, Tertiary
/ Proteins - chemistry
/ Sequence Alignment
/ Sequence Homology, Amino Acid
/ Sulfolobus - enzymology
/ Sulfolobus solfataricus
/ Taq Polymerase - metabolism
2001
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Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
by
Ellenberger, Tom
, Silvian, Laura F.
, Pham, Phuong
, Toth, Eric A.
, Goodman, Myron F.
in
Amino Acid Sequence
/ Archaeal Proteins
/ Bacterial Proteins - chemistry
/ Bacterial Proteins - metabolism
/ Biochemistry
/ Biological Microscopy
/ Biomedical and Life Sciences
/ Catalysis
/ Conserved Sequence
/ Crystallography, X-Ray
/ Dbh protein
/ Deoxyribonucleic acid
/ DNA
/ DNA Polymerase beta - chemistry
/ DNA-Directed DNA Polymerase
/ E coli
/ Escherichia coli Proteins
/ Humans
/ Kinetics
/ letter
/ Life Sciences
/ Membrane Biology
/ Models, Molecular
/ Molecular Sequence Data
/ Mutagenesis
/ Protein Structure
/ Protein Structure, Tertiary
/ Proteins - chemistry
/ Sequence Alignment
/ Sequence Homology, Amino Acid
/ Sulfolobus - enzymology
/ Sulfolobus solfataricus
/ Taq Polymerase - metabolism
2001
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Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
by
Ellenberger, Tom
, Silvian, Laura F.
, Pham, Phuong
, Toth, Eric A.
, Goodman, Myron F.
in
Amino Acid Sequence
/ Archaeal Proteins
/ Bacterial Proteins - chemistry
/ Bacterial Proteins - metabolism
/ Biochemistry
/ Biological Microscopy
/ Biomedical and Life Sciences
/ Catalysis
/ Conserved Sequence
/ Crystallography, X-Ray
/ Dbh protein
/ Deoxyribonucleic acid
/ DNA
/ DNA Polymerase beta - chemistry
/ DNA-Directed DNA Polymerase
/ E coli
/ Escherichia coli Proteins
/ Humans
/ Kinetics
/ letter
/ Life Sciences
/ Membrane Biology
/ Models, Molecular
/ Molecular Sequence Data
/ Mutagenesis
/ Protein Structure
/ Protein Structure, Tertiary
/ Proteins - chemistry
/ Sequence Alignment
/ Sequence Homology, Amino Acid
/ Sulfolobus - enzymology
/ Sulfolobus solfataricus
/ Taq Polymerase - metabolism
2001
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Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
Journal Article
Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
2001
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Overview
A new group of error-prone DNA polymerases overcomes the blockage posed to normal DNA replication by damaged template bases, suggesting an active site with a loose, flexible pocket that accommodates aberrant DNA structures. We have determined a 2.8 Å resolution crystal structure of the
Sulfolobus solfataricus
Dbh protein, a DNA translesion polymerase closely related to
Escherichia coli
DNA polymerase IV and human polymerase κ. A high error rate is observed for the Dbh polymerase in a range of 10
−2
–10
−3
for all 12 base substitution mispairs. The crystal structure of Dbh reveals an overall architecture resembling other DNA polymerases but has unique features that are likely to contribute to error-prone synthesis, including −1 frameshifting mutations.
Publisher
Nature Publishing Group US,Nature Publishing Group
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