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Molecular epidemiology of cefotaxime-resistant Escherichia coli from dairy farms in South West England identifies a dominant plasmid encoding CTX-M-32
by
Schubert, Hannah
, Morley, Katy
, Gould, Virginia C
, Avison, Matthew B
, Cogan, Tristan A
, Puddy, Emma F
, Findlay, Jacqueline
, Mounsey, Oliver
, Reyher, Kristen K
, Newbold, Nerissa
in
Cefotaxime
/ Cephalosporins
/ Dairy farms
/ E coli
/ Epidemiology
/ Escherichia coli
/ Farms
2019
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Molecular epidemiology of cefotaxime-resistant Escherichia coli from dairy farms in South West England identifies a dominant plasmid encoding CTX-M-32
by
Schubert, Hannah
, Morley, Katy
, Gould, Virginia C
, Avison, Matthew B
, Cogan, Tristan A
, Puddy, Emma F
, Findlay, Jacqueline
, Mounsey, Oliver
, Reyher, Kristen K
, Newbold, Nerissa
in
Cefotaxime
/ Cephalosporins
/ Dairy farms
/ E coli
/ Epidemiology
/ Escherichia coli
/ Farms
2019
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Molecular epidemiology of cefotaxime-resistant Escherichia coli from dairy farms in South West England identifies a dominant plasmid encoding CTX-M-32
by
Schubert, Hannah
, Morley, Katy
, Gould, Virginia C
, Avison, Matthew B
, Cogan, Tristan A
, Puddy, Emma F
, Findlay, Jacqueline
, Mounsey, Oliver
, Reyher, Kristen K
, Newbold, Nerissa
in
Cefotaxime
/ Cephalosporins
/ Dairy farms
/ E coli
/ Epidemiology
/ Escherichia coli
/ Farms
2019
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Molecular epidemiology of cefotaxime-resistant Escherichia coli from dairy farms in South West England identifies a dominant plasmid encoding CTX-M-32
Paper
Molecular epidemiology of cefotaxime-resistant Escherichia coli from dairy farms in South West England identifies a dominant plasmid encoding CTX-M-32
2019
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Overview
Objectives: The objective of this study was to identify the mechanisms of cefotaxime resistance (CTX-R) in 1226 Escherichia coli from 4581 environmental samples collected on 53 dairy farms over a 2-year period in South West England and to characterise a blaCTX-M-32-producing plasmid, pMOO-32, found to be widely distributed. Methods: CTX-R isolates were identified using MIC breakpoint agar plates. β-lactamase genes of interest (GOIs) were detected by PCR. WGS was performed and analysed using the Center for Genomic Epidemiology platform. A plasmid-specific multiplex PCR was designed to indicate the presence of plasmid pMOO-32. Results: Amongst 1226 CTX-R isolates, PCR identified blaCTX-M group 1 (549 isolates), blaCTX-M group 9 (100 isolates), blaCMY (12 isolates), blaDHA (1 isolate) and no GOI (566 isolates). WGS analysis of 184 representative isolates identified blaCTX-M (131 isolates; encoding CTX-M-1, -14, -15, -32 and the novel variant, CTX-M-214), blaCMY-2 (6 isolates), blaDHA-1 (one isolate) and presumed AmpC-hyperproduction in 46 isolates that were PCR negative for GOIs. A highly conserved plasmid was identified in 73 isolates, representing 27 E. coli STs. This ~220 kb IncHI2 plasmid carrying blaCTX-M-32 was designated pMOO-32, was found to be stable in cattle and human transconjugant E. coli even in the absence of selective pressure, and was found by multiplex PCR to be present on 26/53 study farms. Conclusions: β-lactamases capable of conferring resistance to third generation cephalosporins were evident on 47/53 farms within this study. This was largely because of the widespread dissemination of an IncHI2 plasmid carrying blaCTX-M-32.
Publisher
Cold Spring Harbor Laboratory Press
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