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2,216 result(s) for "Barbier, N."
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Evaluation of early single dose vaccination on swine influenza A virus transmission in piglets: From experimental data to mechanistic modelling
•We evaluated swine influenza A transmission virus in piglets with different MDA statuses after a single-dose vaccination.•The transmission rate of the challenge strain was found 3.6 time greater in MDA-positive than in MDA-negative pigs.•Estimated parameters were unsed to feed a mechanistic model of SwIAV transmission in a farrow-to-finish pig farm.•An extended SwIAV within-farm persistence was observed when both sows and piglets were batch-to-batch vaccinated.•Alternative vaccination schemes need to be tested, accounting for population dynamics and hosts’ immune statuses. Swine influenza A virus (swIAV) is a major pathogen affecting pigs with a huge economic impact and potentially zoonotic. Epidemiological studies in endemically infected farms permitted to identify critical factors favoring on-farm persistence, among which maternally-derived antibodies (MDAs). Vaccination is commonly practiced in breeding herds and might be used for immunization of growing pigs at weaning. Althoughinterference between MDAs and vaccination was reported in young piglets, its impact on swIAV transmission was not yet quantified. To this aim, this study reports on a transmission experiment in piglets with or without MDAs, vaccinated with a single dose injection at four weeks of age, and challenged 17 days post-vaccination. To transpose small-scale experiments to real-life situation, estimated parameters were used in a simulation tool to assess their influence at the herd level. Based on a thorough follow-up of the infection chain during the experiment, the transmission of the swIAV challenge strain was highly dependent on the MDA status of the pigs when vaccinated. MDA-positive vaccinated animals showed a direct transmission rate 3.6-fold higher than the one obtained in vaccinated animals without MDAs, estimated to 1.2. Vaccination nevertheless reduced significantly the contribution of airborne transmission when compared with previous estimates obtained in unvaccinated animals. The integration of parameter estimates in a large-scale simulation model, representing a typical farrow-to-finish pig herd, evidenced an extended persistence of viral spread when vaccination of sows and single dose vaccination of piglets was hypothesized. When extinction was quasi-systematic at year 5 post-introduction in the absence of sow vaccination but with single dose early vaccination of piglets, the extinction probability fell down to 33% when batch-to-batch vaccination was implemented both in breeding herd and weaned piglets. These results shed light on a potential adverse effect of single dose vaccination in MDA-positive piglets, which might lead to longer persistence of the SwIAV at the herd level.
Determinants and dynamics of banded vegetation pattern migration in arid climates
Dense vegetation bands aligned to contour levels and alternating at regular intervals with relatively barren interbands have been reported at the margins of all tropical deserts. Since their discovery in the 1950s, it has been supposed that these vegetation bands migrate upslope, forming a space-time cyclic pattern. Evidence to date has been relatively sparse and indirect, and observations have remained conflicting. Unequivocal photographic evidence of upslope migration (a few decimeters per year ) is provided here for three independent dryland areas exhibiting periodic banded pattern: (1) the U.S. northeastern Chihuahuan Desert, (2) the Somalian Haud, and (3) the Mediterranean steppes of eastern Morocco. Migration speeds, averaged through time and space using Fourier cross-spectral analysis, are shown to be directly proportional to pattern scale (wavelength). A sequence of aerial photographs of the Chihuahuan Desert showed that migration was not continuous, but intermittent in response to fluctuating weather regimes. The rates at which bands expanded upslope and contracted downslope were better predicted by the change in annual rainfall than by its average level. However, the migration of banded patterns cannot be considered as systematic because in our observations of three other banded systems located in the Somalian Haud, central Australia, and western New South Wales, migration was undetectable at the available image resolution. In each of the six sites under study, the modal value of band orientation axes was verified to be approximately orthogonal to the steepest slope. Our results underscore the importance of taking both the spatial structure and the past climate sequence into account for understanding vegetation dynamics in arid to semiarid ecosystems. In addition, we show how Fourier spectral analysis applied to historical series of optical images can serve to quantify landscape dynamics at a decadal time scale.
Dynamics of an inertially collapsing gas bubble between two parallel, rigid walls
The collapse of cavitation bubbles in channel flows can give rise to structural damage along neighbouring walls. Although the collapse of a bubble near a single wall has been studied extensively, less is known about bubble collapse between two walls, e.g. as in a channel. We conduct highly resolved, direct simulations of the Navier–Stokes equations to investigate the bubble dynamics and pressures produced by the collapse of a bubble between two parallel rigid walls. We examine the dependence of the dynamics and pressures on the initial bubble location, confinement and driving pressure. For a fixed initial stand-off distance, as the channel width increases the bubble volume, migration distance and re-entrant jet speed approach their single-wall counterparts. We obtain an expression for the minimum channel width at which the confinement does not affect the bubble dynamics depending on the driving pressure difference and initial stand-off distance. For a fixed channel width, varying stand-off distance reduced the maximum wall pressures in the channel relative to the single wall; the trend was consistent for three different driving pressures. Two different jetting behaviours are seen when the bubble is centred in the channel, depending on the channel width. Under significant confinement, wall-parallel re-entrant jets impinge upon each other and further intensify the collapse of the vortex ring.
Multiresolution quantification of deciduousness in West-Central African forests
The characterization of leaf phenology in tropical forests is of major importance for forest typology as well as to improve our understanding of earth–atmosphere–climate interactions or biogeochemical cycles. The availability of satellite optical data with a high temporal resolution has permitted the identification of unexpected phenological cycles, particularly over the Amazon region. A primary issue in these studies is the relationship between the optical reflectance of pixels of 1 km or more in size and ground information of limited spatial extent. In this paper, we demonstrate that optical data with high to very-high spatial resolution can help bridge this scale gap by providing snapshots of the canopy that allow discernment of the leaf-phenological stage of trees and the proportions of leaved crowns within the canopy. We also propose applications for broad-scale forest characterization and mapping in West-Central Africa over an area of 141 000 km2. Eleven years of the Moderate Resolution Imaging Spectroradiometer (MODIS) Enhanced Vegetation Index (EVI) data were averaged over the wet and dry seasons to provide a data set of optimal radiometric quality at a spatial resolution of 250 m. Sample areas covered at a very-high (GeoEye) and high (SPOT-5) spatial resolution were used to identify forest types and to quantify the proportion of leaved trees in the canopy. The dry-season EVI was positively correlated with the proportion of leaved trees in the canopy. This relationship allowed the conversion of EVI into canopy deciduousness at the regional level. On this basis, ecologically important forest types could be mapped, including young secondary, open Marantaceae, Gilbertiodendron dewevrei and swamp forests. We show that in West-Central African forests, a large share of the variability in canopy reflectance, as captured by the EVI, is due to variation in the proportion of leaved trees in the upper canopy, thereby opening new perspectives for biodiversity and carbon-cycle applications.
Inertial collapse of a gas bubble in a shear flow near a rigid wall
Despite the extensive research on bubble collapse near rigid walls, the bubble collapse dynamics in the presence of shear flow near a rigid wall is poorly understood. We conduct direct simulations of the Navier–Stokes equations to explore the bubble dynamics and pressures during bubble collapse near a rigid, flat wall under linear shear flow conditions. We examine the dependence of the bubble collapse morphology and wall pressures on the initial bubble location and shear rate. We find that shear distorts the bubble, generating two re-entrant jets – one developing from the side opposite to the mean flow and the other from the far end toward the wall. Upon impact of the jet on the opposite side of the bubble, water-hammer shocks are produced, which propagate outward and interact with the convoluted bubble shape. The shock stretches the bubble towards the wall, resulting in a closer impact location for the jet originating from the far end compared with the case with no shear flow. The water-hammer pressure location can be approximated as the theoretical distance travelled by a particle initialised at the bubble centre with the corresponding constant shear flow velocity. The maximum wall pressures can thus be predicted by considering the distance between the far jet impingement location and the wall along the wall-normal direction. As the shear rate is increased, the maximum wall pressure increases, although only marginally. We determine the critical initial stand-off distance from the wall at which the bubble morphology is shear dominated, i.e. characterised by converging re-entrant jets.
Diffusion-limited reactive wetting: effect of interfacial reaction behind the advancing triple line
Using the “dispensed drop” variant of the sessile drop technique, spreading kinetics of dilute Cu–Cr alloys on smooth vitreous carbon substrates are measured under helium microleak conditions. In this system, it is known that the drop spreading rate is controlled by diffusion of the reactive atom species (Cr) from the bulk liquid to the triple line, where wetting is induced by formation of an interfacial layer of chromium carbide. Microstructural characterization of rapidly cooled drops shows that growth of the interfacial reaction product layer continues behind the moving solid–liquid–vapor triple line. The spreading velocity is modeled by finite-difference numerical analysis of diffusion near the triple line in the presence of continued interfacial reaction, simplifying the growth rate as being constant and using realistic parameter values. We show that continued interfacial reaction explains the dependence of the triple line spreading rate on the instantaneous wetting angle that is observed in this system.
Short-term androgen deprivation therapy combined with radiotherapy as salvage treatment after radical prostatectomy for prostate cancer (GETUG-AFU 16): a 112-month follow-up of a phase 3, randomised trial
Radiotherapy is the standard salvage treatment after radical prostatectomy. To date, the role of androgen deprivation therapy has not been formally shown. In this follow-up study, we aimed to update the results of the GETUG-AFU 16 trial, which assessed the efficacy of radiotherapy plus androgen suppression versus radiotherapy alone. GETUG-AFU 16 was an open-label, multicentre, phase 3, randomised, controlled trial that enrolled men (aged ≥18 years) with Eastern Cooperative Oncology Group performance status of 0 or 1, with histologically confirmed adenocarcinoma of the prostate (but no previous androgen suppression or pelvic radiotherapy), stage pT2, T3, or T4a (bladder neck involvement only) and pN0 or pNx according to the tumour, node, metastasis (TNM) staging system, whose prostate-specific antigen (PSA) concentration increased from 0·1 ng/mL to between 0·2 ng/mL and 2·0 ng/mL after radical prostatectomy, without evidence of clinical disease. Patients were assigned through central randomisation (1:1) to short-term androgen suppression (subcutaneous injection of 10·8 mg goserelin on the first day of irradiation and 3 months later) plus radiotherapy (3D conformal radiotherapy or intensity modulated radiotherapy of 66 Gy in 33 fractions, 5 days a week for 7 weeks) or radiotherapy alone. Randomisation was stratified using a permuted block method (block sizes of two and four) according to investigational site, radiotherapy modality, and prognosis. The primary endpoint was progression-free survival in the intention-to-treat population. This post-hoc one-shot data collection done 4 years after last data cutoff included patients who were alive at the time of the primary analysis and updated long-term patient status by including dates for first local progression, metastatic disease diagnosis, or death (if any of these had occurred) or the date of the last tumour evaluation or last PSA measurement. Survival at 120 months was reported. Late serious adverse effects were assessed. This trial is registered on ClinicalTrials.gov, NCT00423475. Between Oct 19, 2006, and March 30, 2010, 743 patients were randomly assigned, 374 to radiotherapy alone and 369 to radiotherapy plus goserelin. At the time of data cutoff (March 12, 2019), the median follow-up was 112 months (IQR 102–123). The 120-month progression-free survival was 64% (95% CI 58–69) for patients treated with radiotherapy plus goserelin and 49% (43–54) for patients treated with radiotherapy alone (hazard ratio 0·54, 0·43–0·68; stratified log-rank test p<0·0001). Two cases of secondary cancer occurred since the primary analysis, but were not considered to be treatment related. No treatment-related deaths occurred. The 120-month progression-free survival confirmed the results from the primary analysis. Salvage radiotherapy combined with short-term androgen suppression significantly reduced risk of biochemical or clinical progression and death compared with salvage radiotherapy alone. The results of the GETUG-AFU 16 trial confirm the efficacy of androgen suppression plus radiotherapy as salvage treatment in patients with increasing PSA concentration after radical prostatectomy for prostate cancer. The French Health ministry, AstraZeneca, la Ligue Contre le Cancer, and La Ligue de Haute-Savoie.
Managing Wine Tourism and Biodiversity: The Art of Ambidexterity for Sustainability
Wine tourism is a mutually beneficial opportunity for customers to experience a wine region and for wine producers to promote their individual practices and approaches in the wine- making process. This article aims to understand producers’ perspectives on the challenges they face when trying to protect their wine estate’s biodiversity as they develop wine-related touristic activities. The research is based on an exploratory, multiple case study of wine producers, who are protecting their wine estate’s biodiversity on in Languedoc-Roussillon region, France. The study reveals the important synergies between biodiversity and wine tourism to increase global sustainability, to bond with customers and to positively impact the wine region. Yet, promoting biodiversity on a wine estate creates tensions on resources and requires investments which are not always highly profitable. Raising awareness about biodiversity is also much needed at both ends of the “producer-customer” relationship. Our results led us to develop an ambidexterity model, adapted to the management of wineries, that concurrently protects their biodiversity and develops wine tourism. We believe these results can be useful for both public and private stakeholders to adapt their wine tourism service offers, and support wine producers in their quest to develop biodiversity of their lands and overall sustainability.
Self-Organized Vegetation Patterning as a Fingerprint of Climate and Human Impact on Semi-Arid Ecosystems
1 Spatially periodic vegetation patterns are well known in arid and semi-arid regions around the world. 2 Mathematical models have been developed that attribute this phenomenon to a symmetry-breaking instability. Such models are based on the interplay between competitive and facilitative influences that the vegetation exerts on its own dynamics when it is constrained by arid conditions, but evidence for these predictions is still lacking. Moreover, not all models can account for the development of regularly spaced spots of bare ground in the absence of a soil prepattern. 3 We applied Fourier analysis to high-resolution, remotely sensed data taken at either end of a 40-year interval in southern Niger. Statistical comparisons based on this textural characterization gave us broad-scale evidence that the decrease in rainfall over recent decades in the sub-Saharan Sahel has been accompanied by a detectable shift from homogeneous vegetation cover to spotted patterns marked by a spatial frequency of about$20 cycles\\;km^{-1}$. 4 Wood cutting and grazing by domestic animals have led to a much more marked transition in unprotected areas than in a protected reserve. 5 Field measurements demonstrated that the dominant spatial frequency was endogenous rather than reflecting the spatial variation of any pre-existing heterogeneity in soil properties. 6 All these results support the use of models that can account for periodic vegetation patterns without invoking substrate heterogeneity or anisotropy, and provide new elements for further developments, refinements and tests. 7 This study underlines the potential of studying vegetation pattern properties for monitoring climatic and human impacts on the extensive fragile areas bordering hot deserts. Explicit consideration of vegetation self-patterning may also improve our understanding of vegetation and climate interactions in arid areas.
Assessing aboveground tropical forest biomass using Google Earth canopy images
Reducing Emissions from Deforestation and Forest Degradation (REDD) in efforts to combat climate change requires participating countries to periodically assess their forest resources on a national scale. Such a process is particularly challenging in the tropics because of technical difficulties related to large aboveground forest biomass stocks, restricted availability of affordable, appropriate remote-sensing images, and a lack of accurate forest inventory data. In this paper, we apply the Fourier-based FOTO method of canopy texture analysis to Google Earth's very-high-resolution images of the wet evergreen forests in the Western Ghats of India in order to (1) assess the predictive power of the method on aboveground biomass of tropical forests, (2) test the merits of free Google Earth images relative to their native commercial IKONOS counterparts and (3) highlight further research needs for affordable, accurate regional aboveground biomass estimations. We used the FOTO method to ordinate Fourier spectra of 1436 square canopy images (125 × 125 m) with respect to a canopy grain texture gradient (i.e., a combination of size distribution and spatial pattern of tree crowns), benchmarked against virtual canopy scenes simulated from a set of known forest structure parameters and a 3-D light interception model. We then used 15 1-ha ground plots to demonstrate that both texture gradients provided by Google Earth and IKONOS images strongly correlated with field-observed stand structure parameters such as the density of large trees, total basal area, and aboveground biomass estimated from a regional allometric model. Our results highlight the great potential of the FOTO method applied to Google Earth data for biomass retrieval because the texture-biomass relationship is only subject to 15% relative error, on average, and does not show obvious saturation trends at large biomass values. We also provide the first reliable map of tropical forest aboveground biomass predicted from free Google Earth images.