Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
609
result(s) for
"Fu, Xiaohui"
Sort by:
Characterization of cancer-related fibroblasts (CAF) in hepatocellular carcinoma and construction of CAF-based risk signature based on single-cell RNA-seq and bulk RNA-seq data
2022
Cancer-associated fibroblasts (CAFs) are involved in tumor growth, angiogenesis, metastasis, and resistance to therapy. We sought to explore the CAFs characteristics in hepatocellular carcinoma (HCC) and establish a CAF-based risk signature for predicting the prognosis of HCC patients.
The signal-cell RNA sequencing (scRNA-seq) data was obtained from the GEO database. Bulk RNA-seq data and microarray data of HCC were obtained from the TCGA and GEO databases respectively. Seurat R package was applied to process scRNA-seq data and identify CAF clusters according to the CAF markers. Differential expression analysis was performed to screen differentially expressed genes (DEGs) between normal and tumor samples in TCGA dataset. Then Pearson correlation analysis was used to determine the DEGs associated with CAF clusters, followed by the univariate Cox regression analysis to identify CAF-related prognostic genes. Lasso regression was implemented to construct a risk signature based on CAF-related prognostic genes. Finally, a nomogram model based on the risk signature and clinicopathological characteristics was developed.
Based on scRNA-seq data, we identified 4 CAF clusters in HCC, 3 of which were associated with prognosis in HCC. A total of 423 genes were identified from 2811 DEGs to be significantly correlated with CAF clusters, and were narrowed down to generate a risk signature with 6 genes. These six genes were primarily connected with 39 pathways, such as angiogenesis, apoptosis, and hypoxia. Meanwhile, the risk signature was significantly associated with stromal and immune scores, as well as some immune cells. Multivariate analysis revealed that risk signature was an independent prognostic factor for HCC, and its value in predicting immunotherapeutic outcomes was confirmed. A novel nomogram integrating the stage and CAF-based risk signature was constructed, which exhibited favorable predictability and reliability in the prognosis prediction of HCC.
CAF-based risk signatures can effectively predict the prognosis of HCC, and comprehensive characterization of the CAF signature of HCC may help to interpret the response of HCC to immunotherapy and provide new strategies for cancer treatment.
Journal Article
Taxifolin Protects Dental Pulp Stem Cells under Hypoxia and Inflammation Conditions
2021
Background:
Dental pulp stem cells (DPSCs) are a unique source for future clinical application in dentistry such as periodontology or endodontics. However, DPSCs are prone to apoptosis under abnormal conditions. Taxifolin is a natural flavonoid and possesses many pharmacological activities including anti-hypoxic and anti-inflammatory. We aimed to elucidate the mechanisms of taxifolin protects DPSC under hypoxia and inflammatory conditions.
Methods:
DPSCs from human dental pulp tissue was purchased from Lonza (cat. no. PT-5025. Basel, Switzerland)) and identified by DPSC’s biomarkers. DPSC differentiation in vitro following the manufacturers’ instructions. ARS staining and Oil red staining verify the efficiency of differentiation in vitro after 2 weeks. The changes of various genes and proteins were identified by Q-PCR and western-blot, respectively. Cell viability was determined by the CCK-8 method, while apoptosis was determined by Annexin V/PI staining.
Results:
DPSC differentiation in vitro shows that hypoxia and TNF-α synergistically inhibit the survival and osteogenesis of DPSCs. A final concentration of 10 μM Taxifolin can significantly reduce the apoptosis of DPSCs under inflammation and hypoxia conditions. Taxifolin substantially increases carbonic anhydrase IX (CA9) expression but not HIF1a, and inhibitions of CA9 expression nullify the protective role of taxifolin under hypoxia and inflammatory condition.
Conclusion:
Taxifolin significantly increased the expression of CA9 when it inhibits DPSC apoptosis and taxifolin synergistically to protect DPSCs against apoptosis with CA9 under hypoxia and inflammatory conditions. Taxifolin can be used as a potential drug for clinical treatment of DPSC-related diseases.
Journal Article
Sector operator inequalities involving positive linear maps
2025
In this note, we prove the
p
th power (
p
≥
2
) of two new sector operator inequalities for positive linear maps which are due to Bedrani et al. (Positivity 25:1601-1629,
2021
) and Nasiri (Filomat 38:3429-3438,
2024
), respectively. An application of our results will be included.
Journal Article
Natural Products that Target the NLRP3 Inflammasome to Treat Fibrosis
2020
Fibrosis is a common pathway followed by different organs after injury, and it can lead to parenchymal scarring, cellular dysfunction, and even organ failure. The NLRP3 inflammasome is a multiprotein complex composed of the sensor molecule NLRP3, the adaptor apoptosis-associated speck-like protein containing a CARD (ASC), and the effector protease caspase-1. Overactivation of the NLRP3 inflammasome triggers the abundant secretion of IL-1β and IL-18, induces pyroptosis, and promotes the release of a swathe of proinflammatory proteins, all of which contribute to fibrogenic processes in multiple organs. In recent years, screening bioactive natural compounds for NLRP3 inhibitors to alleviate fibrosis has gained broad interest from the scientific community because of the associated cost-effectiveness and easy access. In this review, we systematically and comprehensively summarize the natural products, including terpenoids, phenols, and alkaloids, among others, and the plant-derived crude extracts, that have been reported to ameliorate fibrosis via inhibiting NLRP3 inflammasome activation and highlight the underlying mechanisms. Among all the compounds, diterpenoids is the most promising candidates for inhibiting NLRP3 inflammasome activation and improving fibrosis, as they possess combined inhibitory effect on NLRP3 inflammasome assembly and NF-κB signaling pathway. All the information may aid in the development of therapeutic strategies for the treatment of fibrotic diseases.
Journal Article
Singular value inequalities for matrices related to convex and concave functions
by
Ma, Shengyan
,
Fu, Xiaohui
,
Hu, Lihong
in
Analysis
,
Applications of Mathematics
,
Concave functions
2025
In this note, we give several singular value inequalities involving convex and concave functions, which can be considered as generalizations of Al-Natoor et al.’s results (J. Math. Inequal. 17:581–589,
2023
). Moreover, some of our results are the generalizations of Al-Natoor et al.’s inequalities (Adv. Oper. Theory 9:21,
2024
).
Journal Article
The Lunar Regolith Thickness and Stratigraphy of the Chang’E-6 Landing Site
2024
The Chang’E-6 (CE-6) mission successfully returned 1935.3 g of lunar soil samples from the Apollo basin within the South Pole–Aitken basin. One of its scientific objectives is to investigate the subsurface structure and regolith thickness at the landing site. Using remote sensing datasets, we estimated the regolith and basalt thicknesses at the landing site by employing the crater morphology method and crater excavation technique. A total of 53 concentric craters and 108 fresh craters with varying excavation depths were identified. Our results indicate that the regolith thickness at the CE-6 landing site ranges from 1.1 to 7.0 m, with an average thickness of 3.5 m. Beneath the regolith, the basalt layer consists of high-Ti basalt overlaying low-Ti basalt, with a total thickness of approximately 64 to 82 m, of which the high-Ti basalt layer accounts for about 22 to 30 m. Based on the local geological history, we proposed a stratigraphy at the CE-6 landing site. These findings provide valuable geological context for interpreting the Lunar Penetrating Radar data and analyzing the returned samples.
Journal Article
A Mars Environment Chamber Coupled with Multiple In Situ Spectral Sensors for Mars Exploration
2021
Laboratory simulation is the only feasible way to achieve Martian environmental conditions on Earth, establishing a key link between the laboratory and Mars exploration. The mineral phases of some Martian surface materials (especially hydrated minerals), as well as their spectral features, are closely related to environmental conditions. Therefore, Martian environment simulation is necessary for Martian mineral detection and analysis. A Mars environment chamber (MEC) coupled with multiple in situ spectral sensors (VIS (visible)-NIR (near-infrared) reflectance spectroscopy, Raman spectroscopy, laser-induced breakdown spectroscopy (LIBS), and UV-VIS emission spectroscopy) was developed at Shandong University at Weihai, China. This MEC is a comprehensive research platform for Martian environmental parameter simulation, regulation, and spectral data collection. Here, the structure, function and performance of the MEC and the coupled spectral sensors were systematically investigated. The spectral characteristics of some geological samples were recorded and the effect of environmental parameter variations (such as gas pressure and temperature) on the spectral features were also acquired by using the in situ spectral sensors under various simulated Martian conditions. CO2 glow discharge plasma was generated and its emission spectra were assigned. The MEC and its tested functional units worked well with good accuracy and repeatability. China is implementing its first Mars mission (Tianwen-1), which was launched on 23 July 2020 and successfully entered into a Mars orbit on 10 February 2021. Many preparatory works such as spectral databases and prediction model building are currently underway using MECs, which will help us build a solid foundation for real Martian spectral data analysis and interpretation.
Journal Article
Mare Volcanism in Apollo Basin Evaluating the Mare Basalt Genesis Models on the Moon
2024
The Apollo basin is a well-preserved double-ringed impact basin located on the northeastern edge of the South Pole–Aitken (SPA) basin. The Apollo basin has been flooded and filled with large volumes of mare lavas, indicating an active volcanism history. Based on orbital data, we reveal that the Apollo basin exhibits an overall asymmetric configuration in the distribution of mare basalts as well as its topography, chemical compositions, and crustal thickness. The Apollo basin is an excellent example for assessing the influences of the above factors on mare basalts petrogenesis and evaluating mare basalt genesis models. It was found that the generation of mare basalt magmas and their emplacement in the Apollo basin seems to be strongly related to local thin crust (<30 km), but the formation of basaltic magmas should be independent of the decompression melting because the mare units (3.34–1.79 Ga) are much younger than the pre-Nectarian Apollo basin. The mare basalts filled in the Apollo basin exhibits a large variation of TiO2 abundances, indicating the heterogeneity of mantle sources, which is possible due to the lunar mantle overturn after the LMO solidification or the impact-induced mantle convection and migration. However, the prolonged mare volcanic history of the Apollo basin is not well explained, especially considering the low Th abundance (<2 ppm) of this region. In addition, the central mare erupted earlier than other mare units within the Apollo basin, which seems to contradict the predictions of the postbasin loading-induced stresses model. Laboratory investigations of the Chang’E-6 mare basalt samples could possibly answer the above questions and provide new insight into the mare volcanic history of the lunar farside and the connections between mare volcanism and impact basin formation/evolution.
Journal Article
Inequalities for partial determinants of accretive block matrices
2023
Let A=[Ai,j]i,j=1m∈Mm(Mn) be an accretive block matrix. We write det1 and det2 for the first and second partial determinants, respectively. In this paper, we show that ∥det1(ReA)∥≤∥(tr(|A|)m)mIn∥ and ∥det2(ReA)∥≤∥(tr(|A|)n)nIm∥ hold for any unitarily invariant norm ∥⋅∥. The two inequalities generalize some known results related to partial determinants of positive-semidefinite block matrices.
Journal Article
Bile cell-free DNA as a novel and powerful liquid biopsy for detecting somatic variants in biliary tract cancer
2019
Tissue sampling of biliary tract carcinomas (BTCs) for molecular characterization is challenging. The aim of this study was to investigate the possibility of identifying individual actionable mutations derived from bile cell-free DNA (cfDNA) using targeted deep sequencing. Ten BTC patients, four with gallbladder carcinomas and six with cholangiocarcinomas, were enrolled in the present study. Using targeted deep sequencing with a panel of 150 tumor-related genes, paired bile cfDNA and tumor DNA were analyzed for mutational variants individually and then compared. The present study, to the best of our knowledge, is the first to reveal that bile cfDNA is predominantly comprised of long DNA fragments, which is not the case for plasma cfDNA. Herein, paired bile cfDNA and tumors from ten BTC patients were examined using targeted deep sequencing. When comparing bile cfDNA and tumor DNA for single nucleotide variation (SNV)/insertion and deletion (Indel), the results using targeted deep sequencing revealed high sensitivity (94.7%) and specificity (99.9%). Additionally, the sensitivity of detecting a copy number variation (CNV) was 75.0%, with a specificity of 98.9%. When comparing two bile extraction methods, including percutaneous transhepatic cholangial drainage and operation, no significant difference in SNV/Indel or CNV detection sensitivity was noted. Moreover, when examining the tumor stage and incidence site, AJCC stage II and the distal bile duct both had significantly decreased CNV detection sensitivities. The present study revealed that targeted deep sequencing can reliably detect mutational variants within bile cfDNA obtained from BTC patients. These preliminary results may shed light on bile cfDNA as a promising liquid biopsy for BTC patients.
Journal Article