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result(s) for
"Gartside, David"
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Process mapping for road works planning and coordination
by
Enoch, Marcus P
,
Brien, Nigel
,
Ruikar, Kirti
in
Automation
,
Business process engineering
,
Business process reengineering
2017
PurposeDiminishing local government budgets and the need to reduce highway works activities necessitate cost effective and efficient processes. The purpose of this paper is to investigate streamlining road works administrative processes to enhance coordinated working at Derby City Council.Design/methodology/approachCase study research of a local authority was undertaken using business process mapping. Specifically, Swimlane analysis enabled re-engineering of business processes from design stage, to works permit issuance. Process improvement recommendations were validated by nine industry experts through a focus group and semi-structured interviews. A logic map was developed for transferability to other councils, identifying key attributes for a successful administrative road works management process.FindingsResearch revealed inherent silo working and processes built around fragmented IT systems creating process inefficiency. Validation found numerous practices and management styles were culturally embedded and common across councils. Peer reviewed recommendations are made to improve working practices, including improving IT systems, removing process bottlenecks, and training staff.Research limitations/implicationsWhilst road works management policy is generally under-researched, its strategic and negative impacts are widely acknowledged. This study highlights the day-to-day operational problems which are interconnected to the strategic impact, bridging an important gap in knowledge, as well as adding to business process re-engineering literature.Originality/valueThe research adds to a limited body of road works management policy research, and also presents a high-level logic map for councils to adopt as appropriate.
Journal Article
ADAPTING to a workforce WITHOUT borders
2014
Although companies have been marching to the beat of globalization for more than 20 years, the globalization mandate has been accelerating at high speeds, right to the top of many C-suite executives' strategic agendas. Not only are companies staking their growth strategies on global expansion and penetration of new markets, but they also are facing a new global talent imperative. A mis-match between where supply and demand of available skills resides is forcing many organizations to turn to other countries for labor to find scarce skills and to source the best available talent. In short, organizations today face a different talent landscape, one in which the global talent map has lost its borders. To achieve the benefits of a globally integrated enterprise, HR and learning professionals will need to help their organizations develop strong local leaders with a global mindset who can quickly adapt to or lead a business in any context across the world.
Trade Publication Article
Realization of ground state in artificial kagome spin ice via topological defect-driven magnetic writing
by
Cohen, Lesley F
,
Branford, Will R
,
Gartside, Jack C
in
Data processing
,
Data storage
,
Electronic devices
2018
Arrays of non-interacting nanomagnets are widespread in data storage and processing. As current technologies approach fundamental limits on size and thermal stability, enhancing functionality through embracing the strong interactions present at high array densities becomes attractive. In this respect, artificial spin ices are geometrically frustrated magnetic metamaterials that offer vast untapped potential due to their unique microstate landscapes, with intriguing prospects in applications from reconfigurable logic to magnonic devices or hardware neural networks. However, progress in such systems is impeded by the inability to access more than a fraction of the total microstate space. Here, we demonstrate that topological defect-driven magnetic writing—a scanning probe technique—provides access to all of the possible microstates in artificial spin ices and related arrays of nanomagnets. We create previously elusive configurations such as the spin-crystal ground state of artificial kagome dipolar spin ices and high-energy, low-entropy ‘monopole-chain’ states that exhibit negative effective temperatures.
Journal Article
Noise-aware training of neuromorphic dynamic device networks
by
Manneschi, Luca
,
Donskikh, Denis
,
Stepney, Susan
in
639/705/117
,
639/766/119/1001
,
Algorithms
2025
In materio computing offers the potential for widespread embodied intelligence by leveraging the intrinsic dynamics of complex systems for efficient sensing, processing, and interaction. While individual devices offer basic data processing capabilities, networks of interconnected devices can perform more complex and varied tasks. However, designing such networks for dynamic tasks is challenging in the absence of physical models and accurate characterization of device noise. We introduce the Noise-Aware Dynamic Optimization (NADO) framework for training networks of dynamical devices, using Neural Stochastic Differential Equations (Neural-SDEs) as differentiable digital twins to capture both the dynamics and stochasticity of devices with intrinsic memory. Our approach combines backpropagation through time with cascade learning, enabling effective exploitation of the temporal properties of physical devices. We validate this method on networks of spintronic devices across both temporal classification and regression tasks. By decoupling device model training from network connectivity optimization, our framework reduces data requirements and enables robust, gradient-based programming of dynamical devices without requiring analytical descriptions of their behaviour.
Dynamic systems show promise for physical neural networks, but gradient based optimization requires mathematical models. Here, the authors present a data-driven framework for optimizing networks of arbitrary dynamic systems which is robust to noise, and enables tasks such as neuroprosthetic control.
Journal Article
Frequent somatic mutations in MAP3K5 and MAP3K9 in metastatic melanoma identified by exome sequencing
by
Gartside, Michael G
,
Wu, YuanQing
,
Youngkin, David
in
631/208/2489/144/68
,
631/208/737
,
692/699/67/1813/1634
2012
Nicholas Hayward and colleagues sequenced eight metastatic melanoma exomes and identified frequent somatic mutations in two MAP kinase family genes,
MAP3K5
and
MAP3K9
. Mutation in
MAP3K9
may confer resistance to temozolomide, a common chemotherapeutic drug.
We sequenced eight melanoma exomes to identify new somatic mutations in metastatic melanoma. Focusing on the mitogen-activated protein (MAP) kinase kinase kinase (MAP3K) family, we found that 24% of melanoma cell lines have mutations in the protein-coding regions of either
MAP3K5
or
MAP3K9
. Structural modeling predicted that mutations in the kinase domain may affect the activity and regulation of these protein kinases. The position of the mutations and the loss of heterozygosity of
MAP3K5
and
MAP3K9
in 85% and 67% of melanoma samples, respectively, together suggest that the mutations are likely to be inactivating. In
in vitro
kinase assays, MAP3K5 I780F and MAP3K9 W333* variants had reduced kinase activity. Overexpression of
MAP3K5
or
MAP3K9
mutants in HEK293T cells reduced the phosphorylation of downstream MAP kinases. Attenuation of MAP3K9 function in melanoma cells using siRNA led to increased cell viability after temozolomide treatment, suggesting that decreased MAP3K pathway activity can lead to chemoresistance in melanoma.
Journal Article
POT1 loss-of-function variants predispose to familial melanoma
2014
David Adams, Julia Newton-Bishop, Timothy Bishop, Nicholas Hayward and colleagues identify loss-of-function variants in
POT1
in several families with early onset multiple primary melanoma. They further show that these variants disrupt telomere binding by POT1 and are associated with increased telomere length.
Deleterious germline variants in
CDKN2A
account for around 40% of familial melanoma cases
1
, and rare variants in
CDK4
,
BRCA2
,
BAP1
and the promoter of
TERT
have also been linked to the disease
2
,
3
,
4
,
5
. Here we set out to identify new high-penetrance susceptibility genes by sequencing 184 melanoma cases from 105 pedigrees recruited in the UK, The Netherlands and Australia that were negative for variants in known predisposition genes. We identified families where melanoma cosegregates with loss-of-function variants in the protection of telomeres 1 gene (
POT1
), with a proportion of family members presenting with an early age of onset and multiple primary tumors. We show that these variants either affect
POT1
mRNA splicing or alter key residues in the highly conserved oligonucleotide/oligosaccharide-binding (OB) domains of POT1, disrupting protein-telomere binding and leading to increased telomere length. These findings suggest that
POT1
variants predispose to melanoma formation via a direct effect on telomeres.
Journal Article
FGFR2 Point Mutations in 466 Endometrioid Endometrial Tumors: Relationship with MSI, KRAS, PIK3CA, CTNNB1 Mutations and Clinicopathological Features
by
Byron, Sara A.
,
Gartside, Michael
,
Pollock, Pamela M.
in
Aged
,
beta Catenin - genetics
,
Biology
2012
Mutations in multiple oncogenes including KRAS, CTNNB1, PIK3CA and FGFR2 have been identified in endometrial cancer. The aim of this study was to provide insight into the clinicopathological features associated with patterns of mutation in these genes, a necessary step in planning targeted therapies for endometrial cancer. 466 endometrioid endometrial tumors were tested for mutations in FGFR2, KRAS, CTNNB1, and PIK3CA. The relationships between mutation status, tumor microsatellite instability (MSI) and clinicopathological features including overall survival (OS) and disease-free survival (DFS) were evaluated using Kaplan-Meier survival analysis and Cox proportional hazard models. Mutations were identified in FGFR2 (48/466); KRAS (87/464); CTNNB1 (88/454) and PIK3CA (104/464). KRAS and FGFR2 mutations were significantly more common, and CTNNB1 mutations less common, in MSI positive tumors. KRAS and FGFR2 occurred in a near mutually exclusive pattern (p = 0.05) and, surprisingly, mutations in KRAS and CTNNB1 also occurred in a near mutually exclusive pattern (p = 0.0002). Multivariate analysis revealed that mutation in KRAS and FGFR2 showed a trend (p = 0.06) towards longer and shorter DFS, respectively. In the 386 patients with early stage disease (stage I and II), FGFR2 mutation was significantly associated with shorter DFS (HR = 3.24; 95% confidence interval, CI, 1.35-7.77; p = 0.008) and OS (HR = 2.00; 95% CI 1.09-3.65; p = 0.025) and KRAS was associated with longer DFS (HR = 0.23; 95% CI 0.05-0.97; p = 0.045). In conclusion, although KRAS and FGFR2 mutations share similar activation of the MAPK pathway, our data suggest very different roles in tumor biology. This has implications for the implementation of anti-FGFR or anti-MEK biologic therapies.
Journal Article
Pharmacogenetic stimulation of cholinergic pedunculopontine neurons reverses motor deficits in a rat model of Parkinson’s disease
by
De Paola, Vincenzo
,
Gretenkord, Sabine
,
Elson, Joanna L.
in
Animals
,
Biomedical and Life Sciences
,
Biomedicine
2015
Background
Patients with advanced Parkinson's disease (PD) often present with axial symptoms, including postural- and gait difficulties that respond poorly to dopaminergic agents. Although deep brain stimulation (DBS) of a highly heterogeneous brain structure, the pedunculopontine nucleus (PPN), improves such symptoms, the underlying neuronal substrate responsible for the clinical benefits remains largely unknown, thus hampering optimization of DBS interventions. Choline acetyltransferase (ChAT)::Cre
+
transgenic rats were sham-lesioned or rendered parkinsonian through intranigral, unihemispheric stereotaxic administration of the ubiquitin-proteasomal system inhibitor, lactacystin, combined with designer receptors exclusively activated by designer drugs (DREADD), to activate the cholinergic neurons of the nucleus tegmenti pedunculopontine (PPTg), the rat equivalent of the human PPN. We have previously shown that the lactacystin rat model accurately reflects aspects of PD, including a partial loss of PPTg cholinergic neurons, similar to what is seen in the post-mortem brains of advanced PD patients.
Results
In this manuscript, we show that transient activation of the remaining PPTg cholinergic neurons in the lactacystin rat model of PD, via peripheral administration of the cognate DREADD ligand, clozapine-N-oxide (CNO), dramatically improved motor symptoms, as was assessed by behavioral tests that measured postural instability, gait, sensorimotor integration, forelimb akinesia and general motor activity.
In vivo
electrophysiological recordings revealed increased spiking activity of PPTg putative cholinergic neurons during CNO-induced activation. c-Fos expression in DREADD overexpressed ChAT-immunopositive (ChAT+) neurons of the PPTg was also increased by CNO administration, consistent with upregulated neuronal activation in this defined neuronal population.
Conclusions
Overall, these findings provide evidence that functional modulation of PPN cholinergic neurons alleviates parkinsonian motor symptoms.
Journal Article
Complex structural rearrangements are present in high-grade dysplastic Barrett’s oesophagus samples
by
Lampe, Guy
,
Aoude, Lauren G.
,
Leonard, Conrad
in
Adenocarcinoma
,
Adenocarcinoma - complications
,
Adenocarcinoma - genetics
2019
Background
Oesophageal adenocarcinoma (EAC) incidence is increasing and has a poor survival rate. Barrett’s oesophagus (BE) is a precursor condition that is associated with EAC and often occurs in conjunction with chronic gastro-oesophageal reflux, however many individuals diagnosed with BE never progress to cancer. An understanding of the genomic features of BE and EAC may help with the early identification of at-risk individuals.
Methods
In this study, we assessed the genomic features of 16 BE samples using whole-genome sequencing. These included non-dysplastic samples collected at two time-points from two BE patients who had not progressed to EAC over several years. Seven other non-dysplastic samples and five dysplastic BE samples with high-grade dysplasia were also examined. We compared the genome profiles of these 16 BE samples with 22 EAC samples.
Results
We observed that samples from the two non-progressor individuals had low numbers of somatic single nucleotide variants, indels and structural variation events compared to dysplastic and the remaining non-dysplastic BE. EAC had the highest level of somatic genomic variations. Mutational signature 17, which is common in EAC, was also present in non-dysplastic and dysplastic BE, but was not present in the non-progressors. Many dysplastic samples had mutations in genes previously reported in EAC, whereas only mutations in
CDKN2A
or in the fragile site genes appeared common in non-dysplastic samples. Rearrangement signatures were used to identify a signature associated with localised complex events such as chromothripsis and breakage fusion-bridge that are characteristic of EACs. Two dysplastic BE samples had a high contribution of this signature and contained evidence of localised rearrangements. Two other dysplastic samples also had regions of localised structural rearrangements. There was no evidence for complex events in non-dysplastic samples.
Conclusions
The presence of complex localised rearrangements in dysplastic samples indicates a need for further investigations into the role such events play in the progression from BE to EAC.
Journal Article