Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
82
result(s) for
"Haase, Axel"
Sort by:
Imaging of pH in vivo using hyperpolarized 13C-labelled zymonic acid
2017
Natural pH regulatory mechanisms can be overruled during several pathologies such as cancer, inflammation and ischaemia, leading to local pH changes in the human body. Here we demonstrate that
13
C-labelled zymonic acid (ZA) can be used as hyperpolarized magnetic resonance pH imaging sensor. ZA is synthesized from [1-
13
C]pyruvic acid and its
13
C resonance frequencies shift up to 3.0 p.p.m. per pH unit in the physiological pH range. The long lifetime of the hyperpolarized signal enhancement enables monitoring of pH, independent of concentration, temperature, ionic strength and protein concentration. We show
in vivo
pH maps within rat kidneys and subcutaneously inoculated tumours derived from a mammary adenocarcinoma cell line and characterize ZA as non-toxic compound predominantly present in the extracellular space. We suggest that ZA represents a reliable and non-invasive extracellular imaging sensor to localize and quantify pH, with the potential to improve understanding, diagnosis and therapy of diseases characterized by aberrant acid-base balance.
Local pH alterations can be manifestations of pathologies such as cancer, inflammation and ischaemia. Here Düwel
et al
. show hyperpolarized
13
C-labelled zymonic acid can be used as a non-invasive probe to map and measure pH
in vivo
, suggesting it as a candidate for clinical imaging and a diagnostic tool.
Journal Article
Hyperpolarized Amino Acid Derivatives as Multivalent Magnetic Resonance pH Sensor Molecules
by
Müller, Christoph
,
Schwaiger, Markus
,
Hövener, Jan B.
in
amino acids
,
dissolution dynamic nuclear polarization
,
hyperpolarized
2018
pH is a tightly regulated physiological parameter that is often altered in diseased states like cancer. The development of biosensors that can be used to non-invasively image pH with hyperpolarized (HP) magnetic resonance spectroscopic imaging has therefore recently gained tremendous interest. However, most of the known HP-sensors have only individually and not comprehensively been analyzed for their biocompatibility, their pH sensitivity under physiological conditions, and the effects of chemical derivatization on their logarithmic acid dissociation constant (pKa). Proteinogenic amino acids are biocompatible, can be hyperpolarized and have at least two pH sensitive moieties. However, they do not exhibit a pH sensitivity in the physiologically relevant pH range. Here, we developed a systematic approach to tailor the pKa of molecules using modifications of carbon chain length and derivatization rendering these molecules interesting for pH biosensing. Notably, we identified several derivatives such as [1-13C]serine amide and [1-13C]-2,3-diaminopropionic acid as novel pH sensors. They bear several spin-1/2 nuclei (13C, 15N, 31P) with high sensitivity up to 4.8 ppm/pH and we show that 13C spins can be hyperpolarized with dissolution dynamic polarization (DNP). Our findings elucidate the molecular mechanisms of chemical shift pH sensors that might help to design tailored probes for specific pH in vivo imaging applications.
Journal Article
A 16-channel MR coil for simultaneous PET/MR imaging in breast cancer
by
Nimbalkar, Manoj
,
Schwaiger, Markus
,
Metz, Stephan
in
Breast
,
Breast - diagnostic imaging
,
Breast - pathology
2015
Objectives
To implement and evaluate a dedicated receiver array coil for simultaneous positron emission tomography/magnetic resonance (PET/MR) imaging in breast cancer.
Methods
A 16-channel receiver coil design was optimized for simultaneous PET/MR imaging. To assess MR performance, the signal-to-noise ratio, parallel imaging capability and image quality was evaluated in phantoms, volunteers and patients and compared to clinical standard protocols. For PET evaluation, quantitative
18
F-FDG PET images of phantoms and seven patients (14 lesions) were compared to images without the coil. In PET image reconstruction, a CT-based template of the coil was combined with the MR-acquired attenuation correction (AC) map of the phantom/patient.
Results
MR image quality was comparable to clinical MR-only examinations. PET evaluation in phantoms showed regionally varying underestimation of the standardised uptake value (SUV; mean 22 %) due to attenuation caused by the coil. This was improved by implementing the CT-based coil template in the AC (<2 % SUV underestimation). Patient data indicated that including the coil in the AC increased the SUV values in the lesions (21 ± 9 %).
Conclusions
Using a dedicated PET/MR breast coil, state-of-the-art MRI was possible. In PET, accurate quantification and image homogeneity could be achieved if a CT-template of this coil was included in the AC for PET image reconstruction.
Key Points
•
State
-
of
-
the
-
art breast MRI using a dedicated PET
/
MR breast coil is feasible
.
•
A multi
-
channel design facilitates shorter MR acquisition times via parallel imaging
.
•
An MR coil inside a simultaneous PET
/
MR system causes PET photon attenuation
.
•
Including a coil CT
-
template in PET image reconstruction results in recovering accurate quantification
.
Journal Article
Water ascent in tall trees: does evolution of land plants rely on a highly metastable state?
by
Zimmermann, Ulrich
,
Wegner, Lars H.
,
Schneider, Heike
in
Biological and medical sciences
,
Cavitation flow
,
Fundamental and applied biological sciences. Psychology
2004
The Cohesion Theory considers plant xylem as a 'vulnerable pipeline' isolated from the osmotically connected tissue cells, phloem and mycorrhizas living in symbiosis with plant roots. It is believed that water is pulled exclusively by transpiration-induced negative pressure gradients of several megapascals through continuous water columns from the roots to the foliage. Water under such negative pressures is extremely unstable, particularly given the hydrophobicity of the inner xylem walls and sap composition (lipids, proteins, mucopolysaccharides, etc.) that prevents the development of stable negative pressures larger than about -1 MPa. However, many plant physiologists still view the Cohesion Theory as the absolute and universal truth because clever wording from the proponents of this theory has concealed the recent breakdown of the Scholander pressure bomb (and other indirect methods) as qualified tools for measuring negative pressures in transpiring plants. Here we show that the arguments of the proponents of the Cohesion Theory are completely misleading. We further present an enormous bulk of evidence supporting the view that - depending on the species and ecophysiological context - many other forces, additional to low tensions, can be involved in water ascent and that water can be lifted by a series of watergates (like ships in staircase locks).
Journal Article
Magnetic Nanoparticles in Magnetic Resonance Imaging and Diagnostics
by
Haase, Axel
,
Rümenapp, Christine
,
Gleich, Bernhard
in
Animals
,
Biochemistry
,
Biomedical and Life Sciences
2012
ABSTRACT
Magnetic nanoparticles are useful as contrast agents for magnetic resonance imaging (MRI). Paramagnetic contrast agents have been used for a long time, but more recently superparamagnetic iron oxide nanoparticles (SPIOs) have been discovered to influence MRI contrast as well. In contrast to paramagnetic contrast agents, SPIOs can be functionalized and size-tailored in order to adapt to various kinds of soft tissues. Although both types of contrast agents have a inducible magnetization, their mechanisms of influence on spin-spin and spin-lattice relaxation of protons are different. A special emphasis on the basic magnetism of nanoparticles and their structures as well as on the principle of nuclear magnetic resonance is made. Examples of different contrast-enhanced magnetic resonance images are given. The potential use of magnetic nanoparticles as diagnostic tracers is explored. Additionally, SPIOs can be used in diagnostic magnetic resonance, since the spin relaxation time of water protons differs, whether magnetic nanoparticles are bound to a target or not.
Journal Article
Multisite Kinetic Modeling of ^(13)C Metabolic MR Using 1-^(13)CPyruvate
2014
Hyperpolarized (13)C imaging allows real-time in vivo measurements of metabolite levels. Quantification of metabolite conversion between [1-(13)C]pyruvate and downstream metabolites [1-(13)C]alanine, [1-(13)C]lactate, and [(13)C]bicarbonate can be achieved through kinetic modeling. Since pyruvate interacts dynamically and simultaneously with its downstream metabolites, the purpose of this work is the determination of parameter values through a multisite, dynamic model involving possible biochemical pathways present in MR spectroscopy. Kinetic modeling parameters were determined by fitting the multisite model to time-domain dynamic metabolite data. The results for different pyruvate doses were compared with those of different two-site models to evaluate the hypothesis that for identical data the uncertainty of a model and the signal-to-noise ratio determine the sensitivity in detecting small physiological differences in the target metabolism. In comparison to the two-site exchange models, the multisite model yielded metabolic conversion rates with smaller bias and smaller standard deviation, as demonstrated in simulations with different signal-to-noise ratio. Pyruvate dose effects observed previously were confirmed and quantified through metabolic conversion rate values. Parameter interdependency allowed an accurate quantification and can therefore be useful for monitoring metabolic activity in different tissues.
Journal Article
The head morphology of Ascioplaga mimeta (Coleoptera: Archostemata) and the phylogeny of Archostemata
by
WEIDEMANN, Gerd
,
HÖRNSCHEMEYER, Thomas
,
HAASE, Axel
in
Archostemata
,
Ascioplaga mimeta
,
cupedidae
2006
Internal and external features of the head of Ascioplaga mimeta (Coleoptera: Archostemata) were studied with micro X-ray computertomography ( mu CT) and nuclear magnetic resonance imaging (NMRI). These methods allowed the reconstruction of the entire internal anatomy from the only available fixed specimen. The mouthparts and their associated musculature are highly derived in many aspects. Their general configuration corresponds to that of Priacma serrata (the only other archostematan studied in comparable detail). However, the mandible-maxilla system of A. mimeta is built as a complex sorting apparatus and shows a distinct specialisation for a specific, but still unknown, food source. The phylogenetic analysis resulted in the identification of a new mono-phylum comprising the genera [Distocupes + (Adinolepis +Ascioplaga)]. The members of this taxon are restricted to the Australian zoogeographic region. The most prominent synapomorphies of these three genera are their derived mouthparts.
Journal Article
Multisite Kinetic Modeling of 13C Metabolic MR Using 1-13CPyruvate
2014
Hyperpolarized 13C imaging allows real-time in vivo measurements of metabolite levels. Quantification of metabolite conversion between [1-13C]pyruvate and downstream metabolites [1-13C]alanine, [1-13C]lactate, and [13C]bicarbonate can be achieved through kinetic modeling. Since pyruvate interacts dynamically and simultaneously with its downstream metabolites, the purpose of this work is the determination of parameter values through a multisite, dynamic model involving possible biochemical pathways present in MR spectroscopy. Kinetic modeling parameters were determined by fitting the multisite model to time-domain dynamic metabolite data. The results for different pyruvate doses were compared with those of different two-site models to evaluate the hypothesis that for identical data the uncertainty of a model and the signal-to-noise ratio determine the sensitivity in detecting small physiological differences in the target metabolism. In comparison to the two-site exchange models, the multisite model yielded metabolic conversion rates with smaller bias and smaller standard deviation, as demonstrated in simulations with different signal-to-noise ratio. Pyruvate dose effects observed previously were confirmed and quantified through metabolic conversion rate values. Parameter interdependency allowed an accurate quantification and can therefore be useful for monitoring metabolic activity in different tissues.
Journal Article
Implications of mucilage on pressure bomb measurements and water lifting in trees rooting in high-salinity water
by
Zimmermann, Ulrich
,
Mimietz, Saskia
,
Schneider, Heike
in
Algae
,
Animal and plant ecology
,
Animal, plant and microbial ecology
2002
Various studies on mangroves and other tall trees rooting in high-salinity water have given compelling evidence that tension is not the only factor in water lifting as thought by plant physiologists. A characteristic feature of these trees is that the tissue cells, the apoplastic space and, in particular, the lumen and the inner walls of many xylem vessels of the roots, the trunk and the branches (up to the apex) contain mucilage. Data on single marine giant algal cells are presented that show that mucilage reduces the chemical activity of water. Longitudinal gradients in the chemical activity of water and interfacial forces are presumably the dominant forces for water lifting. In order to save water on its tortuous pathway to the uppermost foliage trees apparently use different strategies (as revealed by ¹H-NMR imaging), e.g. reduction of the conducting xylem area in the branches at intermediate height by mucilage or interruption of the xylem water columns by gas-filled segments and water lifting through mucilage networks and surface films. Pressure bomb experiments over the entire height of the trees revealed clearly that balancing pressure values cannot be taken as a measure for xylem tension. Such values can be used generally for an estimation of the chemical potential of water in the xylem of leafy twigs under atmospheric pressure, µw, ₕ ₌₀, provided that a species-specific \"threshold pressure\" (depending on wood density, elastic forces of the tissue, hydraulic coupling between xylem and tissue cells, intercellular spaces, cellular osmotic pressure etc.) is subtracted from the balancing pressure values. Transpiration increases the \"threshold pressure\" considerably and in an unpredictable way. Thus, as shown here, predawn balancing pressure data taken at various heights can yield information about the height dependence of µw (measured at h=0) under field conditions, particularly when the water content of the xylem is simultaneously determined in a reliable manner (e.g. by the compression/decompression method in combination with centrifugation).
Journal Article