Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
651
result(s) for
"Hamada, Hiroshi"
Sort by:
Molecular and cellular basis of left–right asymmetry in vertebrates
2020
Although the human body appears superficially symmetrical with regard to the left–right (L-R) axis, most visceral organs are asymmetric in terms of their size, shape, or position. Such morphological asymmetries of visceral organs, which are essential for their proper function, are under the control of a genetic pathway that operates in the developing embryo. In many vertebrates including mammals, the breaking of L-R symmetry occurs at a structure known as the L-R organizer (LRO) located at the midline of the developing embryo. This symmetry breaking is followed by transfer of an active form of the signaling molecule Nodal from the LRO to the lateral plate mesoderm (LPM) on the left side, which results in asymmetric expression of Nodal (a left-side determinant) in the left LPM. Finally, L-R asymmetric morphogenesis of visceral organs is induced by Nodal-Pitx2 signaling. This review will describe our current understanding of the mechanisms that underlie the generation of L-R asymmetry in vertebrates, with a focus on mice.
Journal Article
Fluid flow-induced left-right asymmetric decay of Dand5 mRNA in the mouse embryo requires a Bicc1-Ccr4 RNA degradation complex
by
Komatsu, Kaoru R.
,
Nishimura, Hiromi
,
Bando, Kana
in
3' Untranslated Regions
,
631/136/1455
,
631/136/1660/1993
2021
Molecular left-right (L-R) asymmetry is established at the node of the mouse embryo as a result of the sensing of a leftward fluid flow by immotile cilia of perinodal crown cells and the consequent degradation of
Dand5
mRNA on the left side. We here examined how the fluid flow induces
Dand5
mRNA decay. We found that the first 200 nucleotides in the 3′ untranslated region (3′-UTR) of
Dand5
mRNA are necessary and sufficient for the left-sided decay and to mediate the response of a 3′-UTR reporter transgene to Ca
2+
, the cation channel Pkd2, the RNA-binding protein Bicc1 and their regulation by the flow direction. We show that Bicc1 preferentially recognizes GACR and YGAC sequences, which can explain the specific binding to a conserved GACGUGAC motif located in the proximal
Dand5
3′-UTR. The Cnot3 component of the Ccr4-Not deadenylase complex interacts with Bicc1 and is also required for
Dand5
mRNA decay at the node. These results suggest that Ca
2+
currents induced by leftward fluid flow stimulate Bicc1 and Ccr4-Not to mediate
Dand5
mRNA degradation specifically on the left side of the node.
Questioning what regulates left-right asymmetry breaking in the mouse node: the authors identify a 200 bp stretch of the Dand5 3’UTR where Bicc1 binds, and Cnot proteins downstream of calcium flow regulate the post-transcriptional regulation of Dand5 by Bicc1.
Journal Article
Diversity of left-right symmetry breaking strategy in animals version 1; peer review: 2 approved
2020
Left-right (L-R) asymmetry of visceral organs in animals is established during embryonic development via a stepwise process. While some steps are conserved, different strategies are employed among animals for initiating the breaking of body symmetry. In zebrafish (teleost),
Xenopus (amphibian), and mice (mammal), symmetry breaking is elicited by directional fluid flow at the L-R organizer, which is generated by motile cilia and sensed by mechanoresponsive cells. In contrast, birds and reptiles do not rely on the cilia-driven fluid flow. Invertebrates such as
Drosophila and snails employ another distinct mechanism, where the symmetry breaking process is underpinned by cellular chirality acquired downstream of the molecular interaction of myosin and actin. Here, we highlight the convergent entry point of actomyosin interaction and planar cell polarity to the diverse L-R symmetry breaking mechanisms among animals.
Journal Article
Cilia at the Node of Mouse Embryos Sense Fluid Flow for Left-Right Determination via Pkd2
by
Yoshiba, Satoko
,
Dworniczak, Bernd
,
Kuo, Ivana Y.
in
Animals
,
Asymmetry
,
Biological and medical sciences
2012
Unidirectional fluid flow plays an essential role in the breaking of left-right (L-R) symmetry in mouse embryos, but it has remained unclear how the flow is sensed by the embryo. We report that the Ca²⁺ channel Polycystin-2 (Pkd2) is required specifically in the perinodal crown cells for sensing the nodal flow. Examination of mutant forms of Pkd2 shows that the ciliary localization of Pkd2 is essential for correct L-R patterning. Whereas Kif3a mutant embryos, which lack all cilia, failed to respond to an artificial flow, restoration of primary cilia in crown cells rescued the response to the flow. Our results thus suggest that nodal flow is sensed in a manner dependent on Pkd2 by the cilia of crown cells located at the edge of the node.
Journal Article
Rsph4a is essential for the triplet radial spoke head assembly of the mouse motile cilia
by
Sakai, Takafumi
,
Shingyoji, Chikako
,
Horiuchi, Kahoru
in
Analysis
,
Biology and Life Sciences
,
Biotechnology
2020
Motile cilia/flagella are essential for swimming and generating extracellular fluid flow in eukaryotes. Motile cilia harbor a 9+2 arrangement consisting of nine doublet microtubules with dynein arms at the periphery and a pair of singlet microtubules at the center (central pair). In the central system, the radial spoke has a T-shaped architecture and regulates the motility and motion pattern of cilia. Recent cryoelectron tomography data reveal three types of radial spokes (RS1, RS2, and RS3) in the 96 nm axoneme repeat unit; however, the molecular composition of the third radial spoke, RS3 is unknown. In human pathology, it is well known mutation of the radial spoke head-related genes causes primary ciliary dyskinesia (PCD) including respiratory defect and infertility. Here, we describe the role of the primary ciliary dyskinesia protein Rsph4a in the mouse motile cilia. Cryoelectron tomography reveals that the mouse trachea cilia harbor three types of radial spoke as with the other vertebrates and that all triplet spoke heads are lacking in the trachea cilia of Rsph4a-deficient mice. Furthermore, observation of ciliary movement and immunofluorescence analysis indicates that Rsph4a contributes to the generation of the planar beating of motile cilia by building the distal architecture of radial spokes in the trachea, the ependymal tissues, and the oviduct. Although detailed mechanism of RSs assembly remains unknown, our results suggest Rsph4a is a generic component of radial spoke heads, and could explain the severe phenotype of human PCD patients with RSPH4A mutation.
Journal Article
Both Nodal signalling and stochasticity select for prospective distal visceral endoderm in mouse embryos
by
Nishimura, Hiromi
,
Takaoka, Katsuyoshi
,
Hamada, Hiroshi
in
631/136/1455
,
631/136/2086/1986
,
Cells (biology)
2017
Anterior–posterior (A–P) polarity of mouse embryos is established by distal visceral endoderm (DVE) at embryonic day (E) 5.5.
Lefty1
is expressed first at E3.5 in a subset of epiblast progenitor cells (L1
epi
cells) and then in a subset of primitive endoderm cells (L1
dve
cells) fated to become DVE. Here we studied how prospective DVE cells are selected.
Lefty1
expression in L1
epi
and L1
dve
cells depends on Nodal signaling. A cell that experiences the highest level of Nodal signaling begins to express
Lefty1
and becomes an L1
epi
cell. Deletion of
Lefty1
alone or together with
Lefty2
increased the number of prospective DVE cells. Ablation of L1
epi
or L1
dve
cells triggered
Lefty1
expression in a subset of remaining cells. Our results suggest that selection of prospective DVE cells is both random and regulated, and that a fixed prepattern for the A–P axis does not exist before the blastocyst stage.
In the mouse embryo, anterior-posterior polarity is established by distal visceral endoderm (DVE) at embryonic day 5.5 but how this arises is unclear. Here, the authors show that expression of Lefty1 earlier can define DVE, and that future DVE cells are selected by Nodal signalling and stochasticity.
Journal Article
Single‐oocyte transcriptome analysis reveals aging‐associated effects influenced by life stage and calorie restriction
2021
Chromosome segregation errors in oocytes lead to the production of aneuploid eggs, which are the leading cause of pregnancy loss and of several congenital diseases such as Down syndrome. The frequency of chromosome segregation errors in oocytes increases with maternal age, especially at a late stage of reproductive life. How aging at various life stages affects oocytes differently remains poorly understood. In this study, we describe aging‐associated changes in the transcriptome profile of mouse oocytes throughout reproductive life. Our single‐oocyte comprehensive RNA sequencing using RamDA‐seq revealed that oocytes undergo transcriptome changes at a late reproductive stage, whereas their surrounding cumulus cells exhibit transcriptome changes at an earlier stage. Calorie restriction, a paradigm that reportedly prevents aging‐associated egg aneuploidy, promotes a transcriptome shift in oocytes with the up‐regulation of genes involved in chromosome segregation. This shift is accompanied by the improved maintenance of chromosomal cohesin, the loss of which is a hallmark of oocyte aging and causes chromosome segregation errors. These findings have implications for understanding how oocytes undergo aging‐associated functional decline throughout their reproductive life in a context‐dependent manner. This study reports single‐oocyte transcriptome analysis with RamDA‐seq during aging and calorie restriction in mice. Oocytes undergo aging‐associated transcriptome changes at a late reproductive stage, when chromosome segregation errors are pronouncedly increased, while their surrounding cumulus cells exhibit gradual transcriptome changes even at earlier life stages. Calorie restriction promotes a transcriptome shift in oocytes, accompanied with improved maintenance of chromosomal cohesin.
Journal Article
Adjunctive diagnostic tool for histopathological classification of congenital mesoblastic nephroma based in molecular genetic findings
by
Tajiri, Tatsuro
,
Oda, Yoshinao
,
Fukuhara, Masahiro
in
Bioinformatics
,
Biomarkers, Tumor - genetics
,
Cancer Research
2025
Purpose
Congenital mesoblastic nephromas (CMN) are histologically classified into classical, cellular, and mixed subtypes. Most cellular CMNs harbor
ETV6-NTRK3
gene fusions, and classic and mixed CMNs harbor
EGFR
internal tandem duplications (EGFR-ITDs). Classic CMNs are considered benign, whereas recurrent or metastatic diseases occur in the cellular subtypes. Direct identification of mutations is desirable for an accurate diagnosis. However, molecular genetic analyses cannot be performed in a number of histopathology laboratories. This study aimed to investigate a surrogate marker for the accurate histological classification of CMN.
Methods
Overall, 11 CMN cases diagnosed at our institute were included in this study. Reverse transcription-polymerase chain reaction was performed for the
NTRK
gene fusion and EGFR-ITDs in all cases. Comprehensive mRNA analysis was performed using the nCounter
®
Gene Expression Assay. Principal component analysis (PCA) was performed based on the gene expression levels. Immunohistochemical evaluation was conducted for the expression of p-Mek1/2, p-Erk1/2, and EGFR.
Results
PCA revealed differences in mutation patterns between the EGFR-ITDs and
NTRK
fusion tumor groups. Gene ontology analysis of the highly expressed genes in the EGFR-ITDs tumor group revealed enrichment related to the mitogen-activated protein kinase (MAPK) signaling pathway. p-Mek1/2 and p-Erk1/2 immunoreactivity was significantly increased in the EGFR-ITDs tumor group (
p
= 0.018 and
p
= 0.017, respectively). EGFR immunoreactivity is not a useful marker for CMN with EGFR-ITD.
Conclusion
p-Mek1/2 and p-Erk1/2 immunoreactivity may be useful markers for EGFR-ITDs. Thus, MEK1/2 inhibitors possess the potential to be used as a targeted therapy for CMN with EGFR-ITDs.
Journal Article
Retinoid Signaling Determines Germ Cell Fate in Mice
by
Wilhelm, Dagmar
,
Mamiya, Satoru
,
Koopman, Peter
in
animal ovaries
,
Animal reproduction
,
Animals
2006
Germ cells in the mouse embryo can develop as oocytes or spermatogonia, depending on molecular cues that have not been identified. We found that retinoic acid, produced by mesonephroi of both sexes, causes germ cells in the ovary to enter meiosis and inititate oogenesis. Meiosis is retarded in the fetal testis by the action of the retinoid-degrading enzyme CYP26B1, ultimately leading to spermatogenesis. In testes of Cyp26b1-knockout mouse embryos, germ cells enter meiosis precociously, as if in a normal ovary. Thus, precise regulation of retinoid levels during fetal gonad development provides the molecular control mechanism that specifies germ cell fate.
Journal Article
Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5
by
McSheene, Jason C.
,
Hamilton, Danielle S.
,
Minegishi, Katsura
in
14/1
,
3' Untranslated regions
,
3' Untranslated Regions - genetics
2021
Rotating cilia at the vertebrate left-right organizer (LRO) generate an asymmetric leftward flow, which is sensed by cells at the left LRO margin. Ciliary activity of the calcium channel Pkd2 is crucial for flow sensing. How this flow signal is further processed and relayed to the laterality-determining Nodal cascade in the left lateral plate mesoderm (LPM) is largely unknown. We previously showed that flow down-regulates mRNA expression of the Nodal inhibitor Dand5 in left sensory cells. De-repression of the co-expressed Nodal, complexed with the TGFß growth factor Gdf3, drives LPM Nodal cascade induction. Here, we show that post-transcriptional repression of
dand5
is a central process in symmetry breaking of
Xenopus
, zebrafish and mouse. The RNA binding protein Bicc1 was identified as a post-transcriptional regulator of
dand5
and
gdf3
via their 3′-UTRs. Two distinct Bicc1 functions on
dand5
mRNA were observed at pre- and post-flow stages, affecting mRNA stability or flow induced translational inhibition, respectively. To repress
dand5
, Bicc1 co-operates with Dicer1, placing both proteins in the process of flow sensing. Intriguingly, Bicc1 mediated translational repression of a
dand5
3′-UTR mRNA reporter was responsive to
pkd2
, suggesting that a flow induced Pkd2 signal triggers Bicc1 mediated
dand5
inhibition during symmetry breakage.
The authors show that post-transcriptional regulation of the cilia-driven leftward flow target
dand5
is central to symmetry breakage in frog, fish and mouse and is mediated by a 139 nt Bicc1 responsive element in the
dand5
3′UTR, and they present evidence that Pkd2 regulates this Bicc1/
dand5
module.
Journal Article