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The value of lidar derives from its ability to map ecosystem vertical structure which can be used to estimate aboveground carbon storage. Spaceborne lidar sensors collect data along transects and gain value for the global change science community when combined with data sources that have complete horizontal coverage. Data sources and methods for this type of analysis require evaluation. In this work we use image segmentation of 500 m Moderate Resolution Imaging Spectroradiometer (MODIS) data to produce a global map of 4.4 million forest patches. Where a Geoscience Laser Altimeter System (GLAS) transect intersects a patch, its height is calculated from the GLAS observations directly. Regression analysis is then used to estimate the heights of those patches without GLAS observations. Regression goodness‐of‐fit statistics indicate moderately strong relationships for predicting the 90th percentile patch height, with a mean RMSE of 5.9 m and mean correlation (R2) of 0.67.

Gap phase dynamics are the dominant mode of forest turnover in tropical forests. However, gap processes are infrequently studied at the landscape scale. Airborne lidar data offer detailed information on three-dimensional forest structure, providing a means to characterize fine-scale (1 m) processes in tropical forests over large areas. Lidar-based estimates of forest structure (top down) differ from traditional field measurements (bottom up), and necessitate clear-cut definitions unencumbered by the wisdom of a field observer. We offer a new definition of a forest gap that is driven by forest dynamics and consistent with precise ranging measurements from airborne lidar data and tall, multi-layered tropical forest structure. We used 1000 ha of multi-temporal lidar data (2008, 2012) at two sites, the Tapajos National Forest and Ducke Reserve, to study gap dynamics in the Brazilian Amazon. Here, we identified dynamic gaps as contiguous areas of significant growth, that correspond to areas greater than 10 sq m, with height less than 10 m. Applying the dynamic definition at both sites, we found over twice as much area in gap at Tapajos National Forest (4.8%) as compared to Ducke Reserve (2.0%). On average, gaps were smaller at Ducke Reserve and closed slightly more rapidly, with estimated height gains of 1.2 m y-1 versus 1.1 m y-1 at Tapajos. At the Tapajos site, height growth in gap centers was greater than the average height gain in gaps (1.3 m y-1 versus 1.1 m y-1). Rates of height growth between lidar acquisitions reflect the interplay between gap edge mortality, horizontal ingrowth and gap size at the two sites. We estimated that approximately 10% of gap area closed via horizontal ingrowth at Ducke Reserve as opposed to 6% at Tapajos National Forest. Height loss (interpreted as repeat damage and/or mortality) and horizontal ingrowth accounted for similar proportions of gap area at Ducke Reserve (13% and 10%, respectively). At Tapajos, height loss had a much stronger signal (23% versus 6%) within gaps. Both sites demonstrate limited gap contagiousness defined by an increase in the likelihood of mortality in the immediate vicinity ((is) approximately 6 m) of existing gaps.

Developing countries are required to produce robust estimates of forest carbon stocks for successful implementation of climate change mitigation policies related to reducing emissions from deforestation and degradation (REDD). Here we present a \"benchmark\" map of biomass carbon stocks over 2.5 billion ha of forests on three continents, encompassing all tropical forests, for the early 2000s, which will be invaluable for REDD assessments at both project and national scales. We mapped the total carbon stock in live biomass (above- and belowground), using a combination of data from 4,079 in situ inventory plots and satellite light detection and ranging (Lidar) samples of forest structure to estimate carbon storage, plus optical and microwave imagery (1-km resolution) to extrapolate over the landscape. The total biomass carbon stock of forests in the study region is estimated to be 247 Gt C, with 193 Gt C stored aboveground and 54 Gt C stored belowground in roots. Forests in Latin America, sub-Saharan Africa, and Southeast Asia accounted for 49%, 25%, and 26% of the total stock, respectively. By analyzing the errors propagated through the estimation process, uncertainty at the pixel level (100 ha) ranged from ±6% to ±53%, but was constrained at the typical project (10,000 ha) and national (>1,000,000 ha) scales at ca. ±5% and ca. ±1%, respectively. The benchmark map illustrates regional patterns and provides methodologically comparable estimates of carbon stocks for 75 developing countries where previous assessments were either poor or incomplete.

Remote sensing has facilitated extraordinary advances in the modeling, mapping, and understanding of ecosystems. Lidar, or laser altimetry, is an alternative remote sensing technology that promises to both increase the accuracy of biophysical measurements and extend spatial analysis into the third dimension. Lidar can accurately estimate vegetation structural attributes and should be of particular interest to ecologists.

Assessing the persistent impacts of fragmentation on aboveground structure of tropical forests is essential to understanding the consequences of land use change for carbon storage and other ecosystem functions. We investigated the influence of edge distance and fragment size on canopy structure, aboveground woody biomass (AGB), and AGB turnover in the Biological Dynamics of Forest Fragments Project (BDFFP) in central Amazon, Brazil, after 22+ yr of fragment isolation, by combining canopy variables collected with portable canopy profiling lidar and airborne laser scanning surveys with long-term forest inventories. Forest height decreased by 30% at edges of large fragments (>10 ha) and interiors of small fragments (<3 ha). In larger fragments, canopy height was reduced up to 40 m from edges. Leaf area density profiles differed near edges: the density of understory vegetation was higher and midstory vegetation lower, consistent with canopy reorganization via increased regeneration of pioneers following post-fragmentation mortality of large trees. However, canopy openness and leaf area index remained similar to control plots throughout fragments, while canopy spatial heterogeneity was generally lower at edges. AGB stocks and fluxes were positively related to canopy height and negatively related to spatial heterogeneity. Other forest structure variables typically used to assess the ecological impacts of fragmentation (basal area, density of individuals, and density of pioneer trees) were also related to lidar-derived canopy surface variables. Canopy reorganization through the replacement of edge-sensitive species by disturbance-tolerant ones may have mitigated the biomass loss effects due to fragmentation observed in the earlier years of BDFFP. Lidar technology offered novel insights and observational scales for analysis of theecological impacts of fragmentation on forest structure and function, specifically aboveground biomass storage.

Forest canopy height is an important biophysical variable for quantifying carbon storage in terrestrial ecosystems. Active light detection and ranging (lidar) sensors with discrete-return or waveform lidar have produced reliable measures of forest canopy height. However, rigorous procedures are required for an accurate estimation, especially when using waveform lidar, since backscattered signals are likely distorted by topographic conditions within the footprint. Based on extracted waveform parameters, we explore how well a physical slope correction approach performs across different footprint sizes and study sites. The data are derived from airborne (Laser Vegetation Imaging Sensor; LVIS) and spaceborne (Geoscience Laser Altimeter System; GLAS) lidar campaigns. Comparisons against field measurements show that LVIS data can satisfactorily provide a proxy for maximum forest canopy heights (n = 705, RMSE = 4.99 m, and R2 = 0.78), and the simple slope correction grants slight accuracy advancement in the LVIS canopy height retrieval (RMSE of 0.39 m improved). In the same vein of the LVIS with relatively smaller footprint size (~20 m), substantial progress resulted from the physically-based correction for the GLAS (footprint size = ~50 m). When compared against reference LVIS data, RMSE and R2 for the GLAS metrics (n = 527) are improved from 12.74–7.83 m and from 0.54–0.63, respectively. RMSE of 5.32 m and R2 of 0.80 are finally achieved without 38 outliers (n = 489). From this study, we found that both LVIS and GLAS lidar campaigns could be benefited from the physical correction approach, and the magnitude of accuracy improvement was determined by footprint size and terrain slope.

Estimation of the amount of carbon stored in forests is a key challenge for understanding the global carbon cycle, one which remote sensing is expected to help address. However, estimation of carbon storage in moderate to high biomass forests is difficult for conventional optical and radar sensors. Lidar (light detection and ranging) instruments measure the vertical structure of forests and thus hold great promise for remotely sensing the quantity and spatial organization of forest biomass. In this study, we compare the relationships between lidar-measured canopy structure and coincident field measurements of above-ground biomass at sites in the temperate deciduous, temperate coniferous, and boreal coniferous biomes. A single regression for all three sites is compared with equations derived for each site individually. The single equation explains 84% of variance in above-ground biomass (P < 0.0001) and shows no statistically significant bias in its predictions for any individual site.

We mapped native, endemic, and introduced (i.e., exotic) tree species counts, relative basal areas of functional groups, species basal areas, and forest biomass from forest inventory data, satellite imagery, and environmental data for Puerto Rico and the Virgin Islands. Imagery included time series of Landsat composites and Moderate Resolution Imaging Spectroradiometer (MODIS)-based phenology. Environmental data included climate, land-cover, geology, topography, and road distances. Large-scale deforestation and subsequent forest regrowth are clear in the resulting maps decades after large-scale transition back to forest. Stand age, climate, geology, topography, road/urban locations, and protection are clearly influential. Unprotected forests on more accessible or arable lands are younger and have more introduced species and deciduous and nitrogen-fixing basal areas, fewer endemic species, and less biomass. Exotic species are widespread—except in the oldest, most remote forests on the least arable lands, where shade-tolerant exotics may persist. Although the maps have large uncertainty, their patterns of biomass, tree species diversity, and functional traits suggest that for a given geoclimate, forest age is a core proxy for forest biomass, species counts, nitrogen-fixing status, and leaf longevity. Geoclimate indicates hard-leaved species commonness. Until global wall-to-wall remote sensing data from specialized sensors are available, maps from multispectral image time series and other predictor data should help with running ecosystem models and as sustainable development indicators. Forest attribute models trained with a tree species ordination and mapped with nearest neighbor substitution (Phenological Gradient Nearest Neighbor method, PGNN) yielded larger correlation coefficients for observed vs. mapped tree species basal areas than Cubist regression tree models trained separately on each species. In contrast, Cubist regression tree models of forest structural and functional attributes yielded larger such correlation coefficients than the ordination-trained PGNN models.

The ultimate goal of our multi-article series is to demonstrate the Allometric Scaling and Resource Limitation (ASRL) approach for mapping tree heights and biomass. This third article tests the feasibility of the optimized ASRL model over China at both site (14 meteorological stations) and continental scales. Tree heights from the Geoscience Laser Altimeter System (GLAS) waveform data are used for the model optimizations. Three selected ASRL parameters (area of single leaf, α; exponent for canopy radius, η; and root absorption efficiency, γ) are iteratively adjusted to minimize differences between the references and predicted tree heights. Key climatic variables (e.g., temperature, precipitation, and solar radiation) are needed for the model simulations. We also exploit the independent GLAS and in situ tree heights to examine the model performance. The predicted tree heights at the site scale are evaluated against the GLAS tree heights using a two-fold cross validation (RMSE = 1.72 m; R2 = 0.97) and bootstrapping (RMSE = 4.39 m; R2 = 0.81). The modeled tree heights at the continental scale (1 km spatial resolution) are compared to both GLAS (RMSE = 6.63 m; R2 = 0.63) and in situ (RMSE = 6.70 m; R2 = 0.52) measurements. Further, inter-comparisons against the existing satellite-based forest height maps have resulted in a moderate degree of agreements. Our results show that the optimized ASRL model is capable of satisfactorily retrieving tree heights over continental China at both scales. Subsequent studies will focus on the estimation of woody biomass after alleviating the discussed limitations.

Spatial variation of tropical forest tree height is a key indicator of ecological processes associated with forest growth and carbon dynamics. Here we examine the macroscale variations of tree height of humid tropical forests across three continents and quantify the climate and edaphic controls on these variations. Forest tree heights are systematically sampled across global humid tropical forests with more than 2.5 million measurements from Geoscience Laser Altimeter System (GLAS) satellite observations (2004–2008). We used top canopy height (TCH) of GLAS footprints to grid the statistical mean and variance and the 90 percentile height of samples at 0.5 degrees to capture the regional variability of average and large trees globally. We used the spatial regression method (spatial eigenvector mapping-SEVM) to evaluate the contributions of climate, soil and topography in explaining and predicting the regional variations of forest height. Statistical models suggest that climate, soil, topography, and spatial contextual information together can explain more than 60% of the observed forest height variation, while climate and soil jointly explain 30% of the height variations. Soil basics, including physical compositions such as clay and sand contents, chemical properties such as PH values and cation-exchange capacity, as well as biological variables such as the depth of organic matter, all present independent but statistically significant relationships to forest height across three continents. We found significant relations between the precipitation and tree height with shorter trees on the average in areas of higher annual water stress, and large trees occurring in areas with low stress and higher annual precipitation but with significant differences across the continents. Our results confirm other landscape and regional studies by showing that soil fertility, topography and climate may jointly control a significant variation of forest height and influencing patterns of aboveground biomass stocks and dynamics. Other factors such as biotic and disturbance regimes, not included in this study, may have less influence on regional variations but strongly mediate landscape and small-scale forest structure and dynamics.