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result(s) for
"Nakazawa, Futoshi"
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Identification of Veillonella Species in the Tongue Biofilm by Using a Novel One-Step Polymerase Chain Reaction Method
by
Mashima, Izumi
,
Theodorea, Citra Fragrantia
,
Thaweboon, Sroisiri
in
Adolescent
,
Analysis
,
Bacteria
2016
Six Veillonella species have been frequently isolated from human oral cavities including infectious sites. Recently, it was reported that diet, smoking, and possibly socioeconomic status can influence the bacterial profile in oral cavities. In addition, oral hygiene habits may also influence oral microbiota in terms of both numbers and diversity of microorganisms. In this study, the identification of Veillonella species in tongue biofilms of Thai children, divided into three groups dependent on their status of oral hygiene. For this, we used a novel one-step PCR method with species-specific primer sets based on sequences of the rpoB gene. As shown in the results, the number of isolates of Veillonella species was 101 strains from only 10 of 89 subjects. However, the total number of bacteria was high for all subjects. Since it was reported in previous studies that Veillonella species were easy to isolate in human tongue biofilms at high numbers, the results obtained in this study may suggest country- or age-specific differences. Moreover, Veillonella species were detected predominantly in subjects who had poor oral hygiene compared to those with good or moderate oral hygiene. From these results, there is a possibility that Veillonella species may be an index of oral hygiene status. Furthermore, V. rogosae was a predominant species in tongue biofilms of Thai children, whereas V. parvula and V. denticariosi were not isolated at all. These characteristics of the distribution and frequency of Veillonella species are similar to those reported in previous studies. Although further studies are needed in other countries, in this study, a successful novel one-step PCR method was established to detect Veillonella species in human oral cavities easily and effectively. Furthermore, this is the first report investigating the distribution and frequency of Veillonella species in tongue biofilms of Thai children.
Journal Article
Exploring the salivary microbiome of children stratified by the oral hygiene index
by
Mashima, Izumi
,
Theodorea, Citra F.
,
Scannapieco, Frank A.
in
Actinomyces
,
Adolescent
,
Adults
2017
Poor oral hygiene often leads to chronic diseases such as periodontitis and dental caries resulting in substantial economic costs and diminished quality of life in not only adults but also in children. In this study, the salivary microbiome was characterized in a group of children stratified by the Simplified Oral Hygiene Index (OHI-S). Illumina MiSeq high-throughput sequencing based on the 16S rRNA was utilized to analyze 90 salivary samples (24 Good, 31 Moderate and 35 Poor oral hygiene) from a cohort of Thai children. A total of 38,521 OTUs (Operational Taxonomic Units) with a 97% similarity were characterized in all of the salivary samples. Twenty taxonomic groups (Seventeen genera, two families and one class; Streptococcus, Veillonella, Gemellaceae, Prevotella, Rothia, Porphyromonas, Granulicatella, Actinomyces, TM-7-3, Leptotrichia, Haemophilus, Selenomonas, Neisseria, Megasphaera, Capnocytophaga, Oribacterium, Abiotrophia, Lachnospiraceae, Peptostreptococcus, and Atopobium) were found in all subjects and constituted 94.5-96.5% of the microbiome. Of these twenty genera, the proportion of Streptococcus decreased while Veillonella increased with poor oral hygiene status (P < 0.05). Furthermore, an unassigned species of Veillonella, Veillonella dispar and Veillonella parvula tended to be elevated in the Poor oral hygiene group. This is the first study demonstrating an important association between increase of Veillonella and poor oral hygiene status in children. However, further studies are required to identify the majority of Veillonella at species level in salivary microbiome of the Poor oral hygiene group.
Journal Article
Biofilm Formation of Respiratory Pathogens on Vanillin-Incorporated Denture Base Resin
by
Sroisiri Thaweboon
,
Futoshi Nakazawa
,
Boonyanit Thaweboon
in
Antiinfectives and antibacterials
,
Antimicrobial agents
,
Biofilms
2019
The adherence of microorganisms to denture base materials and the consequent formation of biofilms on these surfaces are contributing factors to biofilm-related oral and systemic diseases. Aspiration pneumonia is a potentially life-threatening respiratory infection associated with the entry of foreign materials into the bronchi. Vanillin-incorporated polymethyl methacrylate (PMMA) resin has been developed for the use in dentistry and demonstrated to have antimicrobial activity. Objective: To evaluate antimicrobial property of vanillin-incorporated PMMA denture base resin on biofilm formation of respiratory pathogens. Materials and methods: The heat polymerized PMMA denture base resin samples (Siam Cement Group, Thailand) were prepared according to the percentage of vanillin incorporation (0%, 0.1% and 0.5% vanillin). Another group of commercial resin samples without vanillin (Triplex®, Ivoclar Vivadent, USA) was prepared in the same manner. All samples were coated with sterile unstimulated saliva collected from three healthy adult volunteers at 37 °C for 60 min. The respiratory pathogenic bacteria used in this study were Staphylococcus aureus ATCC 5638, Streptococcus pneumoniae ATCC 49619, and Pseudomonas aeruginosa ATCC 27853. They were prepared to a concentration of approximately 107 colony forming unit (CFU)/mL. The bacterial biofilm formation was done in 96-well plate and incubated at 37°C for 24-48 h. The amount of biofilm was quantified by Cell Counting Kit WST-8 (Dojindo Molecular Technologies, USA) at 420 nm. All tests were performed in triplicate on three separate occasions. One-way ANOVA and Turkey’s test were used for the statistical analysis. Results: The vanillin-incorporated resin groups (0.1% and 0.5% vanillin) had a significant reduction of S. aureus and P. aeruginosa biofilm mass compared with resins without vanillin (0% vanillin and commercial resin groups). No significant difference was observed in the S. pneumonia biofilm formation. Up to 80% and 33% reductions of biofilm mass were demonstrated on P. aeruginosa and S. aureus, respectively. Conclusion: The incorporation of vanillin to denture base PMMA resin could significantly inhibit biofilm formation of respiratory pathogens. Using this PMMA resin, denture base materials with antimicrobial property can be applied to reduce a risk of respiratory infection in denture wearing patients.
Journal Article
Identification and phylogenetic analysis of oral Veillonella species isolated from the saliva of Japanese children version 4; peer review: 2 approved
by
Mashima, Izumi
,
Otomo, Maiko
,
Theodorea, Citra Fragrantia
in
Anaerobic conditions
,
Biofilms
,
Children
2019
Background: As the most frequent infectious disease among children worldwide, dental caries have a strong relationship with oral hygiene status, specifically in the development of infection. However, the study regarding the identification and distribution of oral
Veillonella are limited. The oral
Veillonella community may affected by the differences in geographical location, age, diet, lifestyle, socio-economic status and oral hygiene status. Here, we studied the oral hygiene status by examining the composition and proportion of oral
Veillonella species in saliva of Japanese children.
Methods: Microbial samples collected from 15 Japanese children divided into three oral hygiene groups were cultured under anaerobic conditions after homogenization and dilution, and inoculated onto brain heart infusion and selective medium
Veillonella agar. Genomic DNA was extracted from each isolate.
Veillonella species were detected by one-step PCR using
rpoB species-specific primers. To analyse the phylogenetic properties of the unknown
Veillonella strains, PCR amplification and sequence analysis of
rpoB were conducted for 10 representative strains.
Results: Although
V. rogosae was found as the predominant species among all groups, its prevalence was significantly lower in the children with poor oral hygiene than in those with good oral hygiene.
V. parvula was the prevalent species in the poor oral hygiene group. Approximately 10% of the isolated
Veillonella strains were not classified to any established species; the phylogenetic analysis showed that they were most closely related to
V.
infantium
Conclusions: This study demonstrates that the composition and proportion of oral
Veillonella species in the saliva of Japanese children is correlated with different oral hygiene status. Changes in detection ratios of
V. parvula and
V. rogosae can be useful indicators of oral hygiene status. Furthermore, new strains closely related to
V. infantium were isolated from the saliva of Japanese children.
Journal Article
Comparative Pan-Genome Analysis of Oral Veillonella Species
by
Kiyoura, Yusuke
,
Haase, Elaine M.
,
Mashima, Izumi
in
biochemical pathways
,
BPGA
,
Carbohydrates
2021
The genus Veillonella is a common and abundant member of the oral microbiome. It includes eight species, V. atypica, V. denticariosi, V. dispar, V. infantium, V. nakazawae, V. parvula, V. rogosae and V. tobetusensis. They possess important metabolic pathways that utilize lactate as an energy source. However, the overall metabolome of these species has not been studied. To further understand the metabolic framework of Veillonella in the human oral microbiome, we conducted a comparative pan-genome analysis of the eight species of oral Veillonella. Analysis of the oral Veillonella pan-genome revealed features based on KEGG pathway information to adapt to the oral environment. We found that the fructose metabolic pathway was conserved in all oral Veillonella species, and oral Veillonella have conserved pathways that utilize carbohydrates other than lactate as an energy source. This discovery may help to better understand the metabolic network among oral microbiomes and will provide guidance for the design of future in silico and in vitro studies.
Journal Article
Distribution and Frequency of Oral Veillonella spp. in the Tongue Biofilm of Healthy Young Adults
2011
Five species of oral Veillonella, V. atypica, V. denticariosi, V. dispar, V. parvula, and V. rogosae, have been suggested to be early colonizers of dental biofilm and causes of opportunistic infections and oral malodor. However, the pathogenicity and the distribution of oral Veillonella spp. have not been clarified. Previously, oral Veillonella spp. were identified by using 16S rDNA sequence analysis. In addition, recently, Veillonella isolates from human tongue biofilm were identified by rpoB gene sequences, but these procedures are time-consuming and complex. To overcome this problem, Igarashi et al. have designed species-specific primer sets for oral Veillonella spp. by using a highly variable region in the rpoB gene. In the present study, the distribution and frequency of oral Veillonella spp. in the tongue biofilm of healthy adults in their 20s were examined by using these species-specific primer sets. Tongue biofilms of these subjects were found to be divided into two groups based on the distribution and frequency of oral Veillonella spp. In one group, V. rogosae was the predominant species; the other group consisted of mainly V. dispar and V. atypica. Multiple factors may influence these differences in distribution and frequency of oral Veillonella spp. in tongue biofilm. This is the first report also demonstrating the availability of the species-specific primer sets for PCR to determine the distribution and frequency of oral Veillonella spp. in the tongue biofilm of healthy adults in their 20s.
Journal Article
Draft Genome Sequences of Four Strains of Recently Established Novel Veillonella Species Isolated from Human Oral Cavities
by
Sabharwal Amarpreet
,
Yu-Chieh, Liao
,
Scannapieco, Frank A
in
Biofilms
,
Bioinformatics
,
Deoxyribonucleic acid
2018
ABSTRACTVeillonella species are known to contribute to the formation of early oral biofilms and tend to be prevalent in people with poor oral hygiene status. Here, we report the draft genome sequences of 4 oral Veillonella strains that were established recently as novel species.
Journal Article
Identification and phylogenetic analysis of oral Veillonella species isolated from the saliva of Japanese children
2019
Background: As the most frequent infectious disease among children worldwide, dental caries have a strong relationship with oral hygiene status, specifically in the development of infection. However, the study regarding the identification and distribution of oral Veillonella are limited. The oral Veillonella community may affected by the differences in geographical location, age, diet, lifestyle, socio-economic status and oral hygiene status. Here, we studied the oral hygiene status by examining the composition and proportion of oral Veillonella species in saliva of Japanese children. Methods: Microbial samples collected from 15 Japanese children divided into three oral hygiene groups were cultured under anaerobic conditions after homogenization and dilution, and inoculated onto brain heart infusion and selective medium Veillonella agar. Genomic DNA was extracted from each isolate. Veillonella species were detected by one-step PCR using rpoB species-specific primers. To analyse the phylogenetic properties of the unknown Veillonella strains, PCR amplification and sequence analysis of rpoB were conducted for 10 representative strains. Results: Although V. rogosae was found as the predominant species among all groups, its prevalence was significantly lower in the children with poor oral hygiene than in those with good oral hygiene. V. parvula was the prevalent species in the poor oral hygiene group. Approximately 10% of the isolated Veillonella strains were not classified to any established species; the phylogenetic analysis showed that they were most closely related to V. infantium Conclusions: This study demonstrates that the composition and proportion of oral Veillonella species in the saliva of Japanese children is correlated with different oral hygiene status. Changes in detection ratios of V. parvula and V. rogosae can be useful indicators of oral hygiene status. Furthermore, new strains closely related to V. infantium were isolated from the saliva of Japanese children.
Journal Article
Identification and phylogenetic analysis of oral Veillonella species isolated from the saliva of Japanese children version 1; peer review: 2 approved with reservations
2019
Background: As the most frequent infectious disease among children worldwide, dental caries have a strong relationship with oral hygiene status, specifically in the development of infection. Oral
Veillonella species have a main role as early colonizers in the oral biofilm formation. Previously, oral
Veillonella strains were detected at the species level in the saliva of Thai children with different oral hygiene statuses. Here, we studied the oral hygiene status by examining the composition and proportion of oral
Veillonella species in saliva of Japanese children to compare with the previous results found in Thai children.
Methods: Microbial samples collected from 15 Japanese children divided into three oral hygiene groups were cultured under anaerobic conditions after homogenization and dilution, and inoculated onto brain heart infusion and selective medium
Veillonella agar. Genomic DNA was extracted from each isolate.
Veillonella species were detected by one-step PCR using
rpoB species-specific primers. To analyse the phylogenetic properties of the unknown
Veillonella strains, PCR amplification and sequence analysis of
rpoB were conducted for 10 representative strains.
Results: Although
V. rogosae was found as the predominant species among all groups, its prevalence was significantly lower in the children with poor oral hygiene than in those with good oral hygiene.
V. parvula was the prevalent species in the poor oral hygiene group. Approximately 10% of the isolated
Veillonella strains were not classified to any established species; the phylogenetic analysis showed that they were most closely related to
V.
infantium
Conclusions: This study demonstrates that the composition and proportion of oral
Veillonella species in the saliva of Japanese children is correlated with different oral hygiene status. Changes in detection ratios of
V. parvula and
V. rogosae can be useful indicators of oral hygiene status. Furthermore, new strains closely related to
V
.
infantium were isolated from the saliva of Japanese children.
Journal Article
Identification and phylogenetic analysis of oral Veillonella species isolated from the saliva of Japanese children version 2; peer review: 1 approved, 1 approved with reservations
2019
Background: As the most frequent infectious disease among children worldwide, dental caries have a strong relationship with oral hygiene status, specifically in the development of infection. Oral
Veillonella species have a main role as early colonizers in the oral biofilm formation. Previously, oral
Veillonella strains were detected at the species level in the saliva of Thai children with different oral hygiene statuses. Here, we studied the oral hygiene status by examining the composition and proportion of oral
Veillonella species in saliva of Japanese children to compare with the previous results found in Thai children.
Methods: Microbial samples collected from 15 Japanese children divided into three oral hygiene groups were cultured under anaerobic conditions after homogenization and dilution, and inoculated onto brain heart infusion and selective medium
Veillonella agar. Genomic DNA was extracted from each isolate.
Veillonella species were detected by one-step PCR using
rpoB species-specific primers. To analyse the phylogenetic properties of the unknown
Veillonella strains, PCR amplification and sequence analysis of
rpoB were conducted for 10 representative strains.
Results: Although
V. rogosae was found as the predominant species among all groups, its prevalence was significantly lower in the children with poor oral hygiene than in those with good oral hygiene.
V. parvula was the prevalent species in the poor oral hygiene group. Approximately 10% of the isolated
Veillonella strains were not classified to any established species; the phylogenetic analysis showed that they were most closely related to
V.
infantium
Conclusions: This study demonstrates that the composition and proportion of oral
Veillonella species in the saliva of Japanese children is correlated with different oral hygiene status. Changes in detection ratios of
V. parvula and
V. rogosae can be useful indicators of oral hygiene status. Furthermore, new strains closely related to
V
.
infantium were isolated from the saliva of Japanese children.
Journal Article